BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005945
         (1254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ40869.1| transcriptional factor MYB-4 [Coptis japonica]        399   e-108
ref|XP_002283785.1| PREDICTED: uncharacterized protein LOC100241...   372   e-100
ref|XP_004141664.1| PREDICTED: uncharacterized protein LOC101214...   365   2e-98
ref|XP_002515966.1| DNA binding protein, putative [Ricinus commu...   360   5e-97
gb|ABK96220.1| unknown [Populus trichocarpa x Populus deltoides]      360   5e-97

>dbj|BAJ40869.1| transcriptional factor MYB-4 [Coptis japonica]
          Length = 221

 Score =  399 bits (1024), Expect = e-108
 Identities = 193/216 (89%), Positives = 193/216 (89%)
 Frame = +3

Query: 174 MTRRCSHCSNNGHNSRTCPTIKGVKLFGVRLTDGAGLMKKSASMGNLSLYCXXXXXXXXX 353
           MTRRCSHCSNNGHNSRTCPTIKGVKLFGVRLTDGAGLMKKSASMGNLSLYC         
Sbjct: 1   MTRRCSHCSNNGHNSRTCPTIKGVKLFGVRLTDGAGLMKKSASMGNLSLYCGASSSGAAS 60

Query: 354 XXHNSPCSDTLRDLGHSSINDGYVSDDPAHTSCSSSNCRGDRKKGTPWTEEEHRXXXXXX 533
             HNSPCSDTLRDLGHSSINDGYVSDDPAHTSCSSSNCRGDRKKGTPWTEEEHR      
Sbjct: 61  PSHNSPCSDTLRDLGHSSINDGYVSDDPAHTSCSSSNCRGDRKKGTPWTEEEHRLFLLGL 120

Query: 534 XXXXXXDWRGIARNFVISRTPTQVASHAQKYFIRQTNSTRRKRRSSLFDMVPDMSIDPQP 713
                 DWRGIARNFVISRTPTQVASHAQKYFIRQTNSTRRKRRSSLFDMVPDMSIDPQP
Sbjct: 121 QKLGKGDWRGIARNFVISRTPTQVASHAQKYFIRQTNSTRRKRRSSLFDMVPDMSIDPQP 180

Query: 714 VPEEPLANGVSQVVESEDTNPLPTLCLSLDGECEPM 821
           VPEEPLANGVSQVVESEDTNPLPTLCLSLDGECEPM
Sbjct: 181 VPEEPLANGVSQVVESEDTNPLPTLCLSLDGECEPM 216


>ref|XP_002283785.1| PREDICTED: uncharacterized protein LOC100241227 [Vitis vinifera]
            gi|297743200|emb|CBI36067.3| unnamed protein product
            [Vitis vinifera]
          Length = 358

 Score =  372 bits (955), Expect = e-100
 Identities = 205/362 (56%), Positives = 243/362 (67%), Gaps = 14/362 (3%)
 Frame = +3

Query: 174  MTRRCSHCSNNGHNSRTCPT---------IKGVKLFGVRLTDGAGLMKKSASMGNLS-LY 323
            MTRRCSHCS NGHNSRTCP+         I GVKLFGVRLTDG+ ++KKSASMG+LS  +
Sbjct: 1    MTRRCSHCSTNGHNSRTCPSRGGGAVAGGIGGVKLFGVRLTDGS-IIKKSASMGSLSSAH 59

Query: 324  CXXXXXXXXXXXHNSPCSDTLRDLGHSSINDGYVSDDPAHTSCSSSNCRGDRKKGTPWTE 503
                         +SP SD LRD  H    DGY+SDDP   +CSS N RG+RKKG PWTE
Sbjct: 60   YHSSSSAAASPNPSSPSSDPLRDAIHEP--DGYLSDDPGQATCSS-NRRGERKKGVPWTE 116

Query: 504  EEHRXXXXXXXXXXXXDWRGIARNFVISRTPTQVASHAQKYFIRQTNSTRRKRRSSLFDM 683
            EEHR            DWRGI+RN+VISRTPTQVASHAQKYFIRQ+N+TRRKRRSSLFDM
Sbjct: 117  EEHRLFLFGLQRLGKGDWRGISRNYVISRTPTQVASHAQKYFIRQSNATRRKRRSSLFDM 176

Query: 684  VPDMSIDPQPVPEEPLANGVSQVVESEDTNPLPTLCLSLDGECEPMESTSHNIPTETEE- 860
            VPDM  D  PVPEE      SQ  E+++ + +P+L LSL+ E EPME+ S     E EE 
Sbjct: 177  VPDMVTDTPPVPEEQFLVPTSQTGETDNASSVPSLNLSLNMEFEPMETISQETVKEAEEA 236

Query: 861  ---FMPCSDSTPIIPAFLPTYLPLSFPFWPPNIVPAVEEKGMEISHHQVLKPTPILSRDP 1031
                +P S+  P++PAF P YLP+ FPFWPPN   A EEK  E S HQVLKP P+L ++P
Sbjct: 237  EETVIPRSELPPVVPAFFPGYLPVPFPFWPPNAASAEEEKESE-SSHQVLKPIPVLPKEP 295

Query: 1032 VNVDELVGMSKLTLGAAATDCIEPSPLSLNLIGSSARQSAFHANQPVNRSNLSKRDGNAI 1211
            VNVDELVGMS+L+LG      I+ SPLSL L+G+ +RQSAFH N  V  S L K   + +
Sbjct: 296  VNVDELVGMSQLSLGEINNGHIDSSPLSLKLLGAPSRQSAFHTNTSVGGSELGKGKNSVV 355

Query: 1212 PA 1217
             A
Sbjct: 356  QA 357


>ref|XP_004141664.1| PREDICTED: uncharacterized protein LOC101214316 [Cucumis sativus]
            gi|449480623|ref|XP_004155948.1| PREDICTED:
            uncharacterized protein LOC101229963 [Cucumis sativus]
          Length = 346

 Score =  365 bits (936), Expect = 2e-98
 Identities = 197/355 (55%), Positives = 240/355 (67%), Gaps = 9/355 (2%)
 Frame = +3

Query: 174  MTRRCSHCSNNGHNSRTCPTIKG--------VKLFGVRLTDGAGLMKKSASMGNLSLYCX 329
            MTRRCSHCSNNGHNSRTCP+  G        VKLFGVRLTDG+  +KKSASMGNLS++  
Sbjct: 1    MTRRCSHCSNNGHNSRTCPSRAGGGGGSGAGVKLFGVRLTDGS-FIKKSASMGNLSVHYH 59

Query: 330  XXXXXXXXXXHNSPCSDTLRDLGHSSINDGYVSDDPAHTSCSSSNCRGDRKKGTPWTEEE 509
                       +SP SD + D      +DG++SDDPAH SCS+ N R +RKKG PWTEEE
Sbjct: 60   SSSSAAASPNPDSPNSDPVHD------SDGFLSDDPAHASCSA-NRRAERKKGVPWTEEE 112

Query: 510  HRXXXXXXXXXXXXDWRGIARNFVISRTPTQVASHAQKYFIRQTNSTRRKRRSSLFDMVP 689
            HR            DWRGI+RNFVI+RTPTQVASHAQKYFIRQ+N+TRRKRRSSLFDMVP
Sbjct: 113  HRLFLVGLQKLGKGDWRGISRNFVITRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMVP 172

Query: 690  DMSIDPQPVPEEPLANGVSQVVESEDTNPLPTLCLSLDGECEPMESTSHNIPTETE-EFM 866
            +M+ DP PVPE+ + +  SQ  E+E++N  P+L LSL+ E   ME+T      E     M
Sbjct: 173  EMATDPLPVPEDEILH-ASQTKETENSNSQPSLNLSLNSEFHMMETTVEENGKELHVPKM 231

Query: 867  PCSDSTPIIPAFLPTYLPLSFPFWPPNIVPAVEEKGMEISHHQVLKPTPILSRDPVNVDE 1046
              +   P+IP F+P Y+P+ FP W P+  P  EE  +E  HH+VLKP P++  +PVNVDE
Sbjct: 232  EVAGFPPVIPGFIPAYMPVPFPIWAPSSFPMEEENVVETCHHEVLKPIPVVPTEPVNVDE 291

Query: 1047 LVGMSKLTLGAAATDCIEPSPLSLNLIGSSARQSAFHANQPVNRSNLSKRDGNAI 1211
            LVGMS+LTL     +  EPSPLSL LIG  +RQSAFH N PV+RS L K D + I
Sbjct: 292  LVGMSQLTLREYERERREPSPLSLKLIGERSRQSAFHPNAPVSRSELIKDDTDTI 346


>ref|XP_002515966.1| DNA binding protein, putative [Ricinus communis]
            gi|223544871|gb|EEF46386.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 381

 Score =  360 bits (923), Expect = 5e-97
 Identities = 207/390 (53%), Positives = 247/390 (63%), Gaps = 42/390 (10%)
 Frame = +3

Query: 174  MTRRCSHCSNNGHNSRTCPT--------------------IKGVKLFGVRLTDGAGLMKK 293
            MTRRCSHCSNNGHNSRTCPT                    I GV+LFGVRLTDG+ ++KK
Sbjct: 1    MTRRCSHCSNNGHNSRTCPTRSSTCSSAAGSGSASSSASSIAGVRLFGVRLTDGS-IIKK 59

Query: 294  SASMGNLSLYCXXXXXXXXXXXHNSPCSDTLRDLGHSSINDGYVSDDPAHTSCSSSNCRG 473
            SASMGNLS +             +SP SD +RD    S+ DGY+SDDPAH SCS+ N RG
Sbjct: 60   SASMGNLSAHYHSSAAASPNP--DSPLSDHVRD----SVQDGYLSDDPAHASCST-NRRG 112

Query: 474  DRKKGTPWTEEEHRXXXXXXXXXXXXDWRGIARNFVISRTPTQVASHAQKYFIRQTNSTR 653
            +RKKG PWTEEEHR            DWRGIARN+V+SRTPTQVASHAQKYFIRQTN+TR
Sbjct: 113  ERKKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFIRQTNATR 172

Query: 654  RKRRSSLFDMVPDMSIDPQPVPEE-PLANGVSQVVESEDTNPLPTLCLSLDGECEPMEST 830
            RKRRSSLFDMVPDM+ +PQ VPEE  L +G  Q+ ++++ + LP+L LS   ECEPME+ 
Sbjct: 173  RKRRSSLFDMVPDMATEPQSVPEEHELPSG--QLGDTDNADALPSLNLSFKPECEPMETA 230

Query: 831  SHNIPTETE-----------------EFMPC----SDSTPIIPAFLPTYLPLSFPFWPPN 947
            S     E E                 EF P     S+ TP I  F P Y+P+ +PFW  N
Sbjct: 231  SEEPAEEPEEMLTGSSELKQTEHRLSEFAPAVPQLSEFTPFISGFYPAYMPIPYPFWSTN 290

Query: 948  IVPAVEEKGMEISHHQVLKPTPILSRDPVNVDELVGMSKLTLGAAATDCIEPSPLSLNLI 1127
                 E   +E S+HQVLKP PI  ++PVNVDELVGMS L++G    D  E S LSL LI
Sbjct: 291  TAIPEEANTVETSNHQVLKPVPIFPKEPVNVDELVGMSHLSIGEMERDHRELSRLSLKLI 350

Query: 1128 GSSARQSAFHANQPVNRSNLSKRDGNAIPA 1217
            G  +RQSAFHAN  V+ S+LS+  G+ I A
Sbjct: 351  GEPSRQSAFHANASVSGSDLSQGKGSPIQA 380


>gb|ABK96220.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 369

 Score =  360 bits (923), Expect = 5e-97
 Identities = 201/371 (54%), Positives = 240/371 (64%), Gaps = 32/371 (8%)
 Frame = +3

Query: 174  MTRRCSHCSNNGHNSRTCPT-----------IKGVKLFGVRLTDGAGLMKKSASMGNLSL 320
            MTRRCSHCSNNGHNSRTCPT           + GVKLFGVRLTDG+ ++KKSASMGNLS 
Sbjct: 1    MTRRCSHCSNNGHNSRTCPTRSSLASSSSSPLSGVKLFGVRLTDGS-IIKKSASMGNLSA 59

Query: 321  YCXXXXXXXXXXXHNSPCSDTLRDLGHSSINDGYVSDDPA-HTSCSSSNCRGDRKKGTPW 497
            +             +SP SD + D       DGY+SDDPA H SCS+S  RGDRKKG PW
Sbjct: 60   HYHSSSSAAASPNPDSPVSDRVHD-------DGYLSDDPAAHASCSTSR-RGDRKKGVPW 111

Query: 498  TEEEHRXXXXXXXXXXXXDWRGIARNFVISRTPTQVASHAQKYFIRQTNSTRRKRRSSLF 677
            TEEEHR            DWRGIARNFV+SRTPTQVASHAQK+FIRQ+N+TRRKRRSSLF
Sbjct: 112  TEEEHRLFLIGLQKLGKGDWRGIARNFVVSRTPTQVASHAQKFFIRQSNATRRKRRSSLF 171

Query: 678  DMVPDMSIDPQPVPEEPLANGVSQVVESEDTNPLPTLCLSLDGECEPMESTSHNIPTETE 857
            DMVP+M+ DPQPVPEE      SQ  + ++ + LP+L LSL  E EPM++ S  +  E +
Sbjct: 172  DMVPEMATDPQPVPEEQELPS-SQAGDDDNVDALPSLNLSLKPEFEPMDTESQELVKERD 230

Query: 858  -------EFMP----CSDSTPI---------IPAFLPTYLPLSFPFWPPNIVPAVEEKGM 977
                   EF P     S+  PI         +P F P Y+P+ +P+W PN  P  E KG 
Sbjct: 231  KTVMGFSEFKPSVPSSSEFVPIVSGSNEFTAVPGFFPAYMPVPYPYWAPNTTPFEEGKGA 290

Query: 978  EISHHQVLKPTPILSRDPVNVDELVGMSKLTLGAAATDCIEPSPLSLNLIGSSARQSAFH 1157
              SHH+VLKP P + ++P NVDELVGMS L+LG       EPSPLSL LIG + RQSAFH
Sbjct: 291  ATSHHEVLKPVPSILKEPFNVDELVGMSHLSLGEIERRHREPSPLSLKLIGEAPRQSAFH 350

Query: 1158 ANQPVNRSNLS 1190
            A+ P + S+LS
Sbjct: 351  ASAPASGSDLS 361