BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005915
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241288.1| uncharacterized protein LOC100794560 [Glycin...   145   5e-33
gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]      141   1e-31
emb|CAA51077.1| nuclear located protein [Daucus carota]               140   2e-31
sp|P37706.2|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, ...   140   2e-31
ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloro...   140   2e-31

>ref|NP_001241288.1| uncharacterized protein LOC100794560 [Glycine max]
           gi|255638439|gb|ACU19529.1| unknown [Glycine max]
          Length = 261

 Score =  145 bits (366), Expect = 5e-33
 Identities = 74/102 (72%), Positives = 84/102 (82%)
 Frame = +1

Query: 1   SLKSIEKAIVSSDLSLNPNNDGEVIRLSVPQLTSDRRKELSKVVAKQAEEGKVAIRNIRR 180
           SLK+IEKAIVSSDL + PNNDGE+IRLS+PQLTSDRRKELSK+VAKQAEEGKVA+RNIRR
Sbjct: 150 SLKAIEKAIVSSDLGMTPNNDGELIRLSIPQLTSDRRKELSKIVAKQAEEGKVALRNIRR 209

Query: 181 DAIXXXXXXXXXXXXXXDIVKDLSGDLQKMTDEYMKKIDSIF 306
           DA+              D VKDLS DLQK+TDEYMKK+D+IF
Sbjct: 210 DALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKVDTIF 251


>gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 286

 Score =  141 bits (355), Expect = 1e-31
 Identities = 73/102 (71%), Positives = 83/102 (81%)
 Frame = +1

Query: 1   SLKSIEKAIVSSDLSLNPNNDGEVIRLSVPQLTSDRRKELSKVVAKQAEEGKVAIRNIRR 180
           SLK+IEKAIVSSDL L PNNDGEVIR+S+PQLTS+RRKELSK+VAK AEEGKVA+RNIRR
Sbjct: 175 SLKAIEKAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKVALRNIRR 234

Query: 181 DAIXXXXXXXXXXXXXXDIVKDLSGDLQKMTDEYMKKIDSIF 306
           DA+              D VKDLS DLQK+TDEYMKK+D+IF
Sbjct: 235 DALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKLDNIF 276


>emb|CAA51077.1| nuclear located protein [Daucus carota]
          Length = 167

 Score =  140 bits (353), Expect = 2e-31
 Identities = 72/102 (70%), Positives = 82/102 (80%)
 Frame = +1

Query: 1   SLKSIEKAIVSSDLSLNPNNDGEVIRLSVPQLTSDRRKELSKVVAKQAEEGKVAIRNIRR 180
           SLK IEKAIV+SDL + PNNDG+VIRLS+PQLT+DRRKELSK+VAKQAEEGKVA+RNIRR
Sbjct: 56  SLKDIEKAIVNSDLGITPNNDGDVIRLSIPQLTADRRKELSKIVAKQAEEGKVALRNIRR 115

Query: 181 DAIXXXXXXXXXXXXXXDIVKDLSGDLQKMTDEYMKKIDSIF 306
           DAI              D VKDLS DLQK+ DEY+KK+DSIF
Sbjct: 116 DAIKSYDKLEKEKKLSEDNVKDLSSDLQKVIDEYIKKVDSIF 157


>sp|P37706.2|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
           AltName: Full=Nuclear located protein D2; AltName:
           Full=Ribosome-releasing factor, chloroplastic; Flags:
           Precursor
          Length = 227

 Score =  140 bits (353), Expect = 2e-31
 Identities = 72/102 (70%), Positives = 82/102 (80%)
 Frame = +1

Query: 1   SLKSIEKAIVSSDLSLNPNNDGEVIRLSVPQLTSDRRKELSKVVAKQAEEGKVAIRNIRR 180
           SLK IEKAIV+SDL + PNNDG+VIRLS+PQLT+DRRKELSK+VAKQAEEGKVA+RNIRR
Sbjct: 116 SLKDIEKAIVNSDLGITPNNDGDVIRLSIPQLTADRRKELSKIVAKQAEEGKVALRNIRR 175

Query: 181 DAIXXXXXXXXXXXXXXDIVKDLSGDLQKMTDEYMKKIDSIF 306
           DAI              D VKDLS DLQK+ DEY+KK+DSIF
Sbjct: 176 DAIKSYDKLEKEKKLSEDNVKDLSSDLQKVIDEYIKKVDSIF 217


>ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
           sativus]
          Length = 278

 Score =  140 bits (352), Expect = 2e-31
 Identities = 72/102 (70%), Positives = 83/102 (81%)
 Frame = +1

Query: 1   SLKSIEKAIVSSDLSLNPNNDGEVIRLSVPQLTSDRRKELSKVVAKQAEEGKVAIRNIRR 180
           SLKSIEKAIV+SDL + PNNDGEVIRL++PQLTS+RRKELSKVVAKQAEEGKVA+RNIRR
Sbjct: 167 SLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRR 226

Query: 181 DAIXXXXXXXXXXXXXXDIVKDLSGDLQKMTDEYMKKIDSIF 306
           DA+              D VKDLS DLQK+TD+YMKKID ++
Sbjct: 227 DALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLY 268