BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005906
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590703.1| Pre-mRNA-processing factor [Medicago truncat...   112   4e-23
ref|XP_003590699.1| Pre-mRNA-processing factor, partial [Medicag...   112   4e-23
ref|XP_003536266.1| PREDICTED: pre-mRNA-processing factor 17-lik...   112   5e-23
emb|CBI32147.3| unnamed protein product [Vitis vinifera]              112   5e-23
ref|XP_002262666.1| PREDICTED: pre-mRNA-processing factor 17-lik...   112   5e-23

>ref|XP_003590703.1| Pre-mRNA-processing factor [Medicago truncatula]
           gi|355479751|gb|AES60954.1| Pre-mRNA-processing factor
           [Medicago truncatula]
          Length = 583

 Score =  112 bits (281), Expect = 4e-23
 Identities = 49/58 (84%), Positives = 53/58 (91%)
 Frame = +2

Query: 416 VVDKSMFHGKEEKDYQGRSWIAAPKDAKAANEKCYIPKRKIHTWSGHTKGVSAIRFFP 589
           V DKS FHGKEE+DYQGRSWIA PKDAKA+N+ CYIPKR +HTWSGHTKGVSAIRFFP
Sbjct: 246 VTDKSTFHGKEERDYQGRSWIAPPKDAKASNDHCYIPKRLVHTWSGHTKGVSAIRFFP 303


>ref|XP_003590699.1| Pre-mRNA-processing factor, partial [Medicago truncatula]
           gi|355479747|gb|AES60950.1| Pre-mRNA-processing factor,
           partial [Medicago truncatula]
          Length = 384

 Score =  112 bits (281), Expect = 4e-23
 Identities = 49/58 (84%), Positives = 53/58 (91%)
 Frame = +2

Query: 416 VVDKSMFHGKEEKDYQGRSWIAAPKDAKAANEKCYIPKRKIHTWSGHTKGVSAIRFFP 589
           V DKS FHGKEE+DYQGRSWIA PKDAKA+N+ CYIPKR +HTWSGHTKGVSAIRFFP
Sbjct: 246 VTDKSTFHGKEERDYQGRSWIAPPKDAKASNDHCYIPKRLVHTWSGHTKGVSAIRFFP 303


>ref|XP_003536266.1| PREDICTED: pre-mRNA-processing factor 17-like [Glycine max]
          Length = 580

 Score =  112 bits (280), Expect = 5e-23
 Identities = 50/58 (86%), Positives = 53/58 (91%)
 Frame = +2

Query: 416 VVDKSMFHGKEEKDYQGRSWIAAPKDAKAANEKCYIPKRKIHTWSGHTKGVSAIRFFP 589
           V DKS FHGKEEKDYQGRSWIA PKDAKA+N+ CY+PKR IHTWSGHTKGVSAIRFFP
Sbjct: 242 VKDKSTFHGKEEKDYQGRSWIAPPKDAKASNDHCYMPKRLIHTWSGHTKGVSAIRFFP 299


>emb|CBI32147.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  112 bits (280), Expect = 5e-23
 Identities = 49/58 (84%), Positives = 52/58 (89%)
 Frame = +2

Query: 416 VVDKSMFHGKEEKDYQGRSWIAAPKDAKAANEKCYIPKRKIHTWSGHTKGVSAIRFFP 589
           V DKS FHGKEE+DYQGRSWIA PKDAKA N+ CYIPKR +HTWSGHTKGVSAIRFFP
Sbjct: 166 VTDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 223


>ref|XP_002262666.1| PREDICTED: pre-mRNA-processing factor 17-like [Vitis vinifera]
          Length = 583

 Score =  112 bits (280), Expect = 5e-23
 Identities = 49/58 (84%), Positives = 52/58 (89%)
 Frame = +2

Query: 416 VVDKSMFHGKEEKDYQGRSWIAAPKDAKAANEKCYIPKRKIHTWSGHTKGVSAIRFFP 589
           V DKS FHGKEE+DYQGRSWIA PKDAKA N+ CYIPKR +HTWSGHTKGVSAIRFFP
Sbjct: 246 VTDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 303