BLASTX nr result

ID: Coptis21_contig00005891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005891
         (842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002458995.1| hypothetical protein SORBIDRAFT_03g043995 [S...   155   1e-35
gb|ABK23311.1| unknown [Picea sitchensis]                             155   1e-35
ref|XP_002298626.1| predicted protein [Populus trichocarpa] gi|2...   154   3e-35
ref|NP_001148745.1| LOC100282361 [Zea mays] gi|195621800|gb|ACG3...   153   4e-35
ref|XP_003564943.1| PREDICTED: enhancer of yellow 2 transcriptio...   153   5e-35

>ref|XP_002458995.1| hypothetical protein SORBIDRAFT_03g043995 [Sorghum bicolor]
           gi|241930970|gb|EES04115.1| hypothetical protein
           SORBIDRAFT_03g043995 [Sorghum bicolor]
          Length = 111

 Score =  155 bits (391), Expect = 1e-35
 Identities = 78/110 (70%), Positives = 90/110 (81%), Gaps = 1/110 (0%)
 Frame = -3

Query: 765 RGSINRPPTPDAEEE-DEQLTLQEIINIKLIESGXXXXXXXXXXXXLIECGWRDEMKSIC 589
           R SINRPPTP AEE+ D++ +L EIINIKL+ESG            L+ECGWRDEMK++C
Sbjct: 1   RASINRPPTPSAEEDRDKEPSLGEIINIKLVESGEKEKLMELLRERLVECGWRDEMKALC 60

Query: 588 RAFTRKKGRNNVTVDELVHVITPKGRASVPDSVKAELLQRIRSFLVSAAL 439
           RA+ RKKGRNNVTVD+L+HVITPKGRASVPDSVKAELLQRIRSFL+S  L
Sbjct: 61  RAYARKKGRNNVTVDDLIHVITPKGRASVPDSVKAELLQRIRSFLMSTTL 110


>gb|ABK23311.1| unknown [Picea sitchensis]
          Length = 141

 Score =  155 bits (391), Expect = 1e-35
 Identities = 82/113 (72%), Positives = 91/113 (80%), Gaps = 1/113 (0%)
 Frame = -3

Query: 774 NRRRGSINRPPTPDAEEEDE-QLTLQEIINIKLIESGXXXXXXXXXXXXLIECGWRDEMK 598
           N  R SINRPPTPD +EE + + TLQEIINIKLIESG            LIECGW+DEMK
Sbjct: 29  NDMRASINRPPTPDHDEETKPEPTLQEIINIKLIESGEKEKLKELLRERLIECGWKDEMK 88

Query: 597 SICRAFTRKKGRNNVTVDELVHVITPKGRASVPDSVKAELLQRIRSFLVSAAL 439
           + CRAFTRKKGR++VTVDELVH ITPKGR+SVPDSVKAELLQRIRSFL+SA L
Sbjct: 89  AQCRAFTRKKGRSSVTVDELVHAITPKGRSSVPDSVKAELLQRIRSFLMSATL 141


>ref|XP_002298626.1| predicted protein [Populus trichocarpa] gi|222845884|gb|EEE83431.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score =  154 bits (388), Expect = 3e-35
 Identities = 78/111 (70%), Positives = 90/111 (81%), Gaps = 2/111 (1%)
 Frame = -3

Query: 765 RGSINRPPTPD--AEEEDEQLTLQEIINIKLIESGXXXXXXXXXXXXLIECGWRDEMKSI 592
           + ++NRPPTPD  AEEE++Q TL E INIKLIESG            LIECGW+DEMK++
Sbjct: 2   KNNMNRPPTPDDTAEEEEKQPTLHETINIKLIESGEKERLTELLRERLIECGWKDEMKAL 61

Query: 591 CRAFTRKKGRNNVTVDELVHVITPKGRASVPDSVKAELLQRIRSFLVSAAL 439
           CRAF +KKGRNNVTVD+LVHVITPKGR S+PDSVKAELLQRIRSFLV AA+
Sbjct: 62  CRAFIKKKGRNNVTVDDLVHVITPKGRVSIPDSVKAELLQRIRSFLVQAAV 112


>ref|NP_001148745.1| LOC100282361 [Zea mays] gi|195621800|gb|ACG32730.1| e2 protein
           isoform 5 [Zea mays] gi|413951502|gb|AFW84151.1| E2
           protein isoform 5 [Zea mays]
          Length = 112

 Score =  153 bits (387), Expect = 4e-35
 Identities = 78/110 (70%), Positives = 89/110 (80%), Gaps = 1/110 (0%)
 Frame = -3

Query: 765 RGSINRPPTPDAEEE-DEQLTLQEIINIKLIESGXXXXXXXXXXXXLIECGWRDEMKSIC 589
           R SINRPPTP AEE+ D+Q +L EIINIKL+E+G            L ECGWRDEMK++C
Sbjct: 2   RASINRPPTPSAEEDRDKQPSLGEIINIKLVETGEKEKLMELLRERLAECGWRDEMKALC 61

Query: 588 RAFTRKKGRNNVTVDELVHVITPKGRASVPDSVKAELLQRIRSFLVSAAL 439
           RA+ RKKGRNNVTVD+L+HVITPKGRASVPDSVKAELLQRIRSFL+S  L
Sbjct: 62  RAYARKKGRNNVTVDDLIHVITPKGRASVPDSVKAELLQRIRSFLMSTTL 111


>ref|XP_003564943.1| PREDICTED: enhancer of yellow 2 transcription factor homolog
           [Brachypodium distachyon]
          Length = 114

 Score =  153 bits (386), Expect = 5e-35
 Identities = 76/112 (67%), Positives = 92/112 (82%), Gaps = 3/112 (2%)
 Frame = -3

Query: 765 RGSINRPPTPDAEEEDEQ---LTLQEIINIKLIESGXXXXXXXXXXXXLIECGWRDEMKS 595
           R SINRPPTP+ EEED++    +L+EIIN+KL+ESG            LIECGWRD+MK+
Sbjct: 2   RASINRPPTPNQEEEDKEGKEASLREIINLKLVESGEKERLMELLRERLIECGWRDDMKA 61

Query: 594 ICRAFTRKKGRNNVTVDELVHVITPKGRASVPDSVKAELLQRIRSFLVSAAL 439
           +CRA+ RKKGRNNVTVD+L+HVITPKGRASVPD VKAELLQRIRSFL+S++L
Sbjct: 62  LCRAYARKKGRNNVTVDDLIHVITPKGRASVPDPVKAELLQRIRSFLMSSSL 113


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