BLASTX nr result

ID: Coptis21_contig00005881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005881
         (1306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280526.1| PREDICTED: peroxisome biogenesis protein 22 ...   346   7e-93
ref|XP_002515731.1| conserved hypothetical protein [Ricinus comm...   342   1e-91
ref|XP_003543380.1| PREDICTED: peroxisome biogenesis protein 22-...   339   1e-90
gb|ABK92497.1| unknown [Populus trichocarpa]                          339   1e-90
ref|XP_004151875.1| PREDICTED: peroxisome biogenesis protein 22-...   337   5e-90

>ref|XP_002280526.1| PREDICTED: peroxisome biogenesis protein 22 [Vitis vinifera]
            gi|297739312|emb|CBI28963.3| unnamed protein product
            [Vitis vinifera]
          Length = 275

 Score =  346 bits (888), Expect = 7e-93
 Identities = 189/287 (65%), Positives = 216/287 (75%), Gaps = 5/287 (1%)
 Frame = -2

Query: 1242 MAPNQSNEDAIQLIKRFGAYITLKITNLFSIT--SLNSRSVGTVAGLALAMVLTWRLLXX 1069
            MA   S E+ ++LIK+FGAY+T+K++NLFSI+  +L+SRSVG +AG A+AM+ TWRLL  
Sbjct: 1    MAAESSKEELVRLIKKFGAYLTVKMSNLFSISLRNLDSRSVGALAGFAVAMIFTWRLLRS 60

Query: 1068 XXXXXXXXXXXXXXXXXXXQEVPKRQXXXXXXXXXXXXXXXXXXXXXXXN--DDLRAQNV 895
                                  PKRQ                       +  +D RAQNV
Sbjct: 61   PSGPQRRQ--------------PKRQAPAPSSSGVSSQSTTTLAPSGVCSSSEDSRAQNV 106

Query: 894  IDEFFQPVKPTLGQVVRQKLCEGRKVTCRLLGVILEESSPEELQ-KQATVRTSVLEVLLE 718
            IDEFFQPVKPTLGQ+VRQKL EGRKVTCRLLGVILEESSPEELQ KQATVR+SVLEVLLE
Sbjct: 107  IDEFFQPVKPTLGQIVRQKLSEGRKVTCRLLGVILEESSPEELQAKQATVRSSVLEVLLE 166

Query: 717  VTKFCDLYLMDRILDDESGEKVLLALEEAGVFTSGGLVKDKVLFSSTENGRISFVRQLEP 538
            +TKFCDLYLM+R+LDDES  KVLLALE+AGVFTSGGLVKDKVLF STE GR SFVRQLEP
Sbjct: 167  ITKFCDLYLMERVLDDESERKVLLALEDAGVFTSGGLVKDKVLFCSTETGRSSFVRQLEP 226

Query: 537  DWHIDTSPDIVFQLARFIKYQLHISPSRPDRTASNVFHSPSLEHFFG 397
            DWHIDT+P++V QLARFIKYQLHISP RP+RTASNVF +PSLE FFG
Sbjct: 227  DWHIDTNPEVVSQLARFIKYQLHISPFRPERTASNVFTAPSLEQFFG 273


>ref|XP_002515731.1| conserved hypothetical protein [Ricinus communis]
            gi|223545168|gb|EEF46678.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 279

 Score =  342 bits (877), Expect = 1e-91
 Identities = 182/281 (64%), Positives = 213/281 (75%), Gaps = 4/281 (1%)
 Frame = -2

Query: 1227 SNEDAIQLIKRFGAYITLKITNLFSIT--SLNSRSVGTVAGLALAMVLTWRLLXXXXXXX 1054
            S E+ +QLIKRFGAYIT+K++N+FSI+  +L+SRSVG +AGLA+A+V TWR+L       
Sbjct: 11   SKEELVQLIKRFGAYITVKMSNIFSISFYNLDSRSVGAIAGLAVAIVFTWRMLRSPGGPQ 70

Query: 1053 XXXXXXXXXXXXXXQEVPKRQXXXXXXXXXXXXXXXXXXXXXXXN--DDLRAQNVIDEFF 880
                             PKRQ                       +  +DLRAQNV+D FF
Sbjct: 71   RRQ--------------PKRQAPTSSTSVVTPQSNSTLMPSGVCSSSEDLRAQNVVDNFF 116

Query: 879  QPVKPTLGQVVRQKLCEGRKVTCRLLGVILEESSPEELQKQATVRTSVLEVLLEVTKFCD 700
            QPVKPTLGQ+VRQKL EGRKVTCRLLGVILEES+PEELQ QATV++SVLEVLLE+TKFCD
Sbjct: 117  QPVKPTLGQIVRQKLSEGRKVTCRLLGVILEESTPEELQTQATVKSSVLEVLLEITKFCD 176

Query: 699  LYLMDRILDDESGEKVLLALEEAGVFTSGGLVKDKVLFSSTENGRISFVRQLEPDWHIDT 520
            LYLM+R+LDDES +KVL ALE AGVFTSGGLVKDKVLF STENGR SFVRQLEPDWHIDT
Sbjct: 177  LYLMERVLDDESEQKVLAALENAGVFTSGGLVKDKVLFCSTENGRSSFVRQLEPDWHIDT 236

Query: 519  SPDIVFQLARFIKYQLHISPSRPDRTASNVFHSPSLEHFFG 397
            +P+IV QL+RFIKYQLHISP RP+R+ +NVF SP+LE FFG
Sbjct: 237  NPEIVSQLSRFIKYQLHISPIRPERSCANVFSSPTLEQFFG 277


>ref|XP_003543380.1| PREDICTED: peroxisome biogenesis protein 22-like [Glycine max]
          Length = 280

 Score =  339 bits (869), Expect = 1e-90
 Identities = 184/283 (65%), Positives = 210/283 (74%), Gaps = 6/283 (2%)
 Frame = -2

Query: 1227 SNEDAIQLIKRFGAYITLKITNLF--SITSLNSRSVGTVAGLALAMVLTWRLLXXXXXXX 1054
            S ++  QLIKRFGAY+T KI+NLF  S+ +L+ RS+G VAGLA+A+V TWRLL       
Sbjct: 10   SKQELFQLIKRFGAYVTFKISNLFPLSLHNLDLRSIGAVAGLAVAIVFTWRLLRSPSGSQ 69

Query: 1053 XXXXXXXXXXXXXXQEVPKRQXXXXXXXXXXXXXXXXXXXXXXXN----DDLRAQNVIDE 886
                              KRQ                            DD RAQNV+DE
Sbjct: 70   RRQQ--------------KRQGPSSSNPGVGTNSNSNASVVPSDACSPSDDSRAQNVVDE 115

Query: 885  FFQPVKPTLGQVVRQKLCEGRKVTCRLLGVILEESSPEELQKQATVRTSVLEVLLEVTKF 706
            FFQPVKPTLGQ+VRQKL EGRKVTCRLLGVILEESSPEELQKQATVR+SVLEVLLEVTKF
Sbjct: 116  FFQPVKPTLGQIVRQKLSEGRKVTCRLLGVILEESSPEELQKQATVRSSVLEVLLEVTKF 175

Query: 705  CDLYLMDRILDDESGEKVLLALEEAGVFTSGGLVKDKVLFSSTENGRISFVRQLEPDWHI 526
            CDLYLM+R+LDDES ++VL+ALEEAGVFTSGGLVKDKVLF STENGR SFVRQLEPDWHI
Sbjct: 176  CDLYLMERVLDDESEKRVLVALEEAGVFTSGGLVKDKVLFCSTENGRSSFVRQLEPDWHI 235

Query: 525  DTSPDIVFQLARFIKYQLHISPSRPDRTASNVFHSPSLEHFFG 397
            D++P+IV QLARFIKYQLH+SP + +RTA+NVF +PSLE FFG
Sbjct: 236  DSNPEIVTQLARFIKYQLHVSPYKTERTAANVFSAPSLEQFFG 278


>gb|ABK92497.1| unknown [Populus trichocarpa]
          Length = 275

 Score =  339 bits (869), Expect = 1e-90
 Identities = 183/289 (63%), Positives = 210/289 (72%), Gaps = 5/289 (1%)
 Frame = -2

Query: 1242 MAPNQSNEDAIQLIKRFGAYITLKITNLFSITSLNSRSVGTVAGLALAMVLTWRLLXXXX 1063
            MA   S ++ +QLIKRF AY+T+KI+NLFS  +L+SRSVG VAGLA+A+V TWRLL    
Sbjct: 1    MATETSKDELLQLIKRFSAYLTVKISNLFSFNTLDSRSVGAVAGLAVAIVFTWRLLRSNS 60

Query: 1062 XXXXXXXXXXXXXXXXXQEVPKRQXXXXXXXXXXXXXXXXXXXXXXXN---DDLRAQNVI 892
                                PKRQ                           +DLR QNV+
Sbjct: 61   GPRRRQ--------------PKRQASTTSSSVVTTQPNAVSIPSGGVCSSSEDLRVQNVV 106

Query: 891  DEFFQPVKPTLGQVVRQKLCEGRKVTCRLLGVILEESSPEELQ--KQATVRTSVLEVLLE 718
            DEFFQPVKPTL Q+VRQKL EGRKVTCRL  VILEESSPEELQ   QATVR+SVLEVLLE
Sbjct: 107  DEFFQPVKPTLAQIVRQKLSEGRKVTCRLFEVILEESSPEELQIVSQATVRSSVLEVLLE 166

Query: 717  VTKFCDLYLMDRILDDESGEKVLLALEEAGVFTSGGLVKDKVLFSSTENGRISFVRQLEP 538
            +TKFCDLYLM+R+LDDES +K+L ALE AGVFTSGGLVKDKVLF STE GR SFVRQLEP
Sbjct: 167  ITKFCDLYLMERVLDDESEQKILAALENAGVFTSGGLVKDKVLFCSTETGRSSFVRQLEP 226

Query: 537  DWHIDTSPDIVFQLARFIKYQLHISPSRPDRTASNVFHSPSLEHFFGLL 391
            DWHIDT+P+I+FQLARFIKYQLH+SP+R +RTA+NVF SPSLE FFG +
Sbjct: 227  DWHIDTNPEILFQLARFIKYQLHVSPTRIERTAANVFSSPSLEQFFGCI 275


>ref|XP_004151875.1| PREDICTED: peroxisome biogenesis protein 22-like [Cucumis sativus]
            gi|449484063|ref|XP_004156773.1| PREDICTED: peroxisome
            biogenesis protein 22-like [Cucumis sativus]
          Length = 276

 Score =  337 bits (863), Expect = 5e-90
 Identities = 178/288 (61%), Positives = 212/288 (73%), Gaps = 6/288 (2%)
 Frame = -2

Query: 1242 MAPNQSNEDAIQLIKRFGAYITLKITNLF--SITSLNSRSVGTVAGLALAMVLTWRLLXX 1069
            MA   S +D +QLIKRFGAY+TLK++N F  S+ +L+SRSVG +AG A+A++ TWRLL  
Sbjct: 1    MADASSKDDLLQLIKRFGAYLTLKMSNFFPISLQNLDSRSVGAIAGFAVAIIFTWRLLRS 60

Query: 1068 XXXXXXXXXXXXXXXXXXXQEVPKRQXXXXXXXXXXXXXXXXXXXXXXXN----DDLRAQ 901
                                + PKRQ                            +DLRA 
Sbjct: 61   SNGHQR--------------QQPKRQMPAPSSSASNAGLNTNEQSIPSGVCSPSEDLRAH 106

Query: 900  NVIDEFFQPVKPTLGQVVRQKLCEGRKVTCRLLGVILEESSPEELQKQATVRTSVLEVLL 721
            NV+DEFFQPVKPTLGQ+VRQKL EGRKVTCRLLG+ILEE SPE+LQKQATVR+SVLEVLL
Sbjct: 107  NVVDEFFQPVKPTLGQIVRQKLSEGRKVTCRLLGIILEEYSPEDLQKQATVRSSVLEVLL 166

Query: 720  EVTKFCDLYLMDRILDDESGEKVLLALEEAGVFTSGGLVKDKVLFSSTENGRISFVRQLE 541
            E+TK+CDLYLM+ +LDDES +KVL ALE+AGVFTSGGLVKDKVLF STENGR SFVRQLE
Sbjct: 167  EITKYCDLYLMETVLDDESEKKVLSALEDAGVFTSGGLVKDKVLFCSTENGRTSFVRQLE 226

Query: 540  PDWHIDTSPDIVFQLARFIKYQLHISPSRPDRTASNVFHSPSLEHFFG 397
            PDWHID++P+I+ QLARFIKYQLH++P R +R+ASN+F SPSLE FFG
Sbjct: 227  PDWHIDSNPEIITQLARFIKYQLHVAPIRHERSASNIFSSPSLEQFFG 274


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