BLASTX nr result

ID: Coptis21_contig00005861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005861
         (1379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515492.1| Vesicle-associated membrane protein, putativ...   334   3e-89
ref|XP_004136359.1| PREDICTED: vesicle-associated membrane prote...   327   6e-87
ref|XP_002324304.1| predicted protein [Populus trichocarpa] gi|1...   327   6e-87
ref|XP_002308673.1| predicted protein [Populus trichocarpa] gi|1...   326   1e-86
ref|XP_002285207.1| PREDICTED: vesicle-associated membrane prote...   326   1e-86

>ref|XP_002515492.1| Vesicle-associated membrane protein, putative [Ricinus communis]
            gi|223545436|gb|EEF46941.1| Vesicle-associated membrane
            protein, putative [Ricinus communis]
          Length = 220

 Score =  334 bits (857), Expect = 3e-89
 Identities = 166/218 (76%), Positives = 183/218 (83%)
 Frame = +3

Query: 366  MAILYALVARGSVILAEFSATSTNASAIARQILEKIPGSDDSNVSYSQDRFIFHVKRTDG 545
            MAILYALVARGSV+LAEF+AT+TNASAIARQILEKIPG++DS+VSYSQDR+IFHVKRTDG
Sbjct: 1    MAILYALVARGSVVLAEFTATATNASAIARQILEKIPGNNDSHVSYSQDRYIFHVKRTDG 60

Query: 546  LSVLCMADDAAGRRIPFAFLEDIHGRFVKTYGRAVHTALAYGMNDEFSRILSQQMDFYSN 725
            L+VLCMADD AGRRIPFAFLEDIH RFV+TYGRAVH+A AY MNDEFSR+L+QQM++YSN
Sbjct: 61   LTVLCMADDTAGRRIPFAFLEDIHQRFVRTYGRAVHSAQAYAMNDEFSRVLNQQMEYYSN 120

Query: 726  DPNADRLNRLKGEMSQVRNVMIENIDKVLERGDRLELLVDKTATMQGNXXXXXXXXXXXX 905
            DPNADR+NRLKGEMSQVRNVMIENIDKVLERGDRLELLVDKTA MQGN            
Sbjct: 121  DPNADRINRLKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFR 180

Query: 906  NSMWWRNVKLTXXXXXXXXXXXXXXXXFVCHGPLLPSC 1019
            N++WWRNVKLT                FVCHGP LP C
Sbjct: 181  NTVWWRNVKLTIALIVLILVIVYVVLAFVCHGPALPRC 218


>ref|XP_004136359.1| PREDICTED: vesicle-associated membrane protein 713-like [Cucumis
            sativus] gi|449516866|ref|XP_004165467.1| PREDICTED:
            vesicle-associated membrane protein 713-like [Cucumis
            sativus]
          Length = 219

 Score =  327 bits (837), Expect = 6e-87
 Identities = 161/218 (73%), Positives = 181/218 (83%)
 Frame = +3

Query: 366  MAILYALVARGSVILAEFSATSTNASAIARQILEKIPGSDDSNVSYSQDRFIFHVKRTDG 545
            MAI+YALVARGSV+LAEFSAT TNAS+I+RQIL+KIPG+DDS+VSYSQDR+IFHVKRTDG
Sbjct: 1    MAIIYALVARGSVVLAEFSATPTNASSISRQILDKIPGNDDSHVSYSQDRYIFHVKRTDG 60

Query: 546  LSVLCMADDAAGRRIPFAFLEDIHGRFVKTYGRAVHTALAYGMNDEFSRILSQQMDFYSN 725
            L+VLCMADD AGRRIPFAFLEDIH RFV+TYGRAVH+A AYGMNDEFSR+LSQQ+++YSN
Sbjct: 61   LTVLCMADDTAGRRIPFAFLEDIHQRFVRTYGRAVHSANAYGMNDEFSRVLSQQLEYYSN 120

Query: 726  DPNADRLNRLKGEMSQVRNVMIENIDKVLERGDRLELLVDKTATMQGNXXXXXXXXXXXX 905
            DPNADR+NRLKGEMSQVRNVMIENIDKVLERGDRLELLVDKT  MQGN            
Sbjct: 121  DPNADRINRLKGEMSQVRNVMIENIDKVLERGDRLELLVDKTTNMQGNTMRFRKQARRFR 180

Query: 906  NSMWWRNVKLTXXXXXXXXXXXXXXXXFVCHGPLLPSC 1019
            N++WW+NVKL                 FVCHG  LP+C
Sbjct: 181  NTIWWKNVKLMVMLIILLLVIAYLVLAFVCHGVTLPTC 218


>ref|XP_002324304.1| predicted protein [Populus trichocarpa] gi|118482139|gb|ABK93000.1|
            unknown [Populus trichocarpa] gi|222865738|gb|EEF02869.1|
            predicted protein [Populus trichocarpa]
          Length = 220

 Score =  327 bits (837), Expect = 6e-87
 Identities = 163/218 (74%), Positives = 182/218 (83%)
 Frame = +3

Query: 366  MAILYALVARGSVILAEFSATSTNASAIARQILEKIPGSDDSNVSYSQDRFIFHVKRTDG 545
            MAILYALVARGSV+LAEF++T+TNASAIARQIL+KIPG+DDSNVSYSQDR+IFHVKRTDG
Sbjct: 1    MAILYALVARGSVVLAEFTSTATNASAIARQILDKIPGNDDSNVSYSQDRYIFHVKRTDG 60

Query: 546  LSVLCMADDAAGRRIPFAFLEDIHGRFVKTYGRAVHTALAYGMNDEFSRILSQQMDFYSN 725
            L+VLCMAD+ AGRRIPFAFLEDIH RFV+TYGRAV TA AY MNDEFSR+LSQQM++Y+N
Sbjct: 61   LTVLCMADETAGRRIPFAFLEDIHQRFVRTYGRAVITAQAYAMNDEFSRVLSQQMEYYTN 120

Query: 726  DPNADRLNRLKGEMSQVRNVMIENIDKVLERGDRLELLVDKTATMQGNXXXXXXXXXXXX 905
            DPNADR+NRLKGEMSQVRNVMIENIDKVLERGDRLELLVDKTA MQGN            
Sbjct: 121  DPNADRINRLKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFR 180

Query: 906  NSMWWRNVKLTXXXXXXXXXXXXXXXXFVCHGPLLPSC 1019
            +++WWRNVKLT                FVCHG  LP+C
Sbjct: 181  STVWWRNVKLTVALILLLLVIIYVVLAFVCHGLTLPTC 218


>ref|XP_002308673.1| predicted protein [Populus trichocarpa] gi|118487208|gb|ABK95432.1|
            unknown [Populus trichocarpa] gi|222854649|gb|EEE92196.1|
            predicted protein [Populus trichocarpa]
          Length = 220

 Score =  326 bits (835), Expect = 1e-86
 Identities = 163/219 (74%), Positives = 181/219 (82%)
 Frame = +3

Query: 366  MAILYALVARGSVILAEFSATSTNASAIARQILEKIPGSDDSNVSYSQDRFIFHVKRTDG 545
            MAILYALVARGSV+LAEFS+T+TNASAIARQIL+KIPG+DDSNVSYSQDR+IFHVKRTDG
Sbjct: 1    MAILYALVARGSVVLAEFSSTATNASAIARQILDKIPGNDDSNVSYSQDRYIFHVKRTDG 60

Query: 546  LSVLCMADDAAGRRIPFAFLEDIHGRFVKTYGRAVHTALAYGMNDEFSRILSQQMDFYSN 725
            L+VLCMAD+ AGRRIPFAFLEDIH RF +TYGRAV TA AY MNDEFSR+LSQQM++Y+N
Sbjct: 61   LAVLCMADETAGRRIPFAFLEDIHQRFARTYGRAVITAQAYAMNDEFSRVLSQQMEYYTN 120

Query: 726  DPNADRLNRLKGEMSQVRNVMIENIDKVLERGDRLELLVDKTATMQGNXXXXXXXXXXXX 905
            DPNADR+NRLKGEMSQVRNVMIENIDKVLERGDRLELLVDKTA MQGN            
Sbjct: 121  DPNADRINRLKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFS 180

Query: 906  NSMWWRNVKLTXXXXXXXXXXXXXXXXFVCHGPLLPSCR 1022
            +++WWRNVKLT                 VCHG  LP+CR
Sbjct: 181  SAVWWRNVKLTVALILLLLVIIYVVLAVVCHGVTLPTCR 219


>ref|XP_002285207.1| PREDICTED: vesicle-associated membrane protein 713 [Vitis vinifera]
            gi|296082055|emb|CBI21060.3| unnamed protein product
            [Vitis vinifera]
          Length = 220

 Score =  326 bits (835), Expect = 1e-86
 Identities = 162/218 (74%), Positives = 178/218 (81%)
 Frame = +3

Query: 366  MAILYALVARGSVILAEFSATSTNASAIARQILEKIPGSDDSNVSYSQDRFIFHVKRTDG 545
            M ILYALVARGS++LAEFS TSTNASAIARQILEKIPG +DSNVSYSQDR+IFHVKRTDG
Sbjct: 1    MTILYALVARGSLVLAEFSGTSTNASAIARQILEKIPGDNDSNVSYSQDRYIFHVKRTDG 60

Query: 546  LSVLCMADDAAGRRIPFAFLEDIHGRFVKTYGRAVHTALAYGMNDEFSRILSQQMDFYSN 725
            L+VLCMADD AGRRIPFAFLEDIH RFV+TYGRAVH+A AY MND+FSR+LSQQM++YSN
Sbjct: 61   LTVLCMADDTAGRRIPFAFLEDIHQRFVRTYGRAVHSAQAYAMNDDFSRVLSQQMEYYSN 120

Query: 726  DPNADRLNRLKGEMSQVRNVMIENIDKVLERGDRLELLVDKTATMQGNXXXXXXXXXXXX 905
            DPNADR+NRLKGEM QVRNVMIENIDKVL+RGDRLELLVDKTA MQGN            
Sbjct: 121  DPNADRINRLKGEMGQVRNVMIENIDKVLDRGDRLELLVDKTANMQGNTFRFRKQARRFR 180

Query: 906  NSMWWRNVKLTXXXXXXXXXXXXXXXXFVCHGPLLPSC 1019
            +++WWRNVKLT                F CHG  LPSC
Sbjct: 181  STVWWRNVKLTVALIIILLVIVYVILAFACHGLALPSC 218


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