BLASTX nr result

ID: Coptis21_contig00005857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005857
         (2283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517949.1| conserved hypothetical protein [Ricinus comm...   271   7e-70
ref|XP_002267468.1| PREDICTED: ethylene-responsive transcription...   270   1e-69
ref|XP_002319909.1| AP2/ERF domain-containing transcription fact...   268   4e-69
ref|XP_003540897.1| PREDICTED: ethylene-responsive transcription...   251   6e-64
ref|XP_002329370.1| AP2/ERF domain-containing transcription fact...   251   8e-64

>ref|XP_002517949.1| conserved hypothetical protein [Ricinus communis]
            gi|223542931|gb|EEF44467.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 426

 Score =  271 bits (692), Expect = 7e-70
 Identities = 181/414 (43%), Positives = 211/414 (50%), Gaps = 33/414 (7%)
 Frame = -3

Query: 1903 EKGSRDFNSV--ERQQQWKPVFEEASISP--RPSKKTKSPERQXXXXXXXXXXXXXXXXX 1736
            EKG R+ N    ERQQQWKPVF EAS++   RP KK +SPERQ                 
Sbjct: 26   EKGKRETNLSIHERQQQWKPVFGEASMAADNRPLKKIRSPERQDPIHVSSSLAHRSTPFS 85

Query: 1735 XXXXS----------------RLIFPFSYDGXXXXXXXXXXXXXXXXXXXXXXXXXXXQM 1604
                                 RL FPF+++G                            M
Sbjct: 86   VPSTVSSISTLPLNPPSSSGSRLSFPFAFEGQLPHQFTTNTCLPYFRHPLHNQQQQQ--M 143

Query: 1603 ISFAANQHGYSPXXXXXXXXXXQ-------YWSDTLHLSPRGKMMMMNRLGQDGRAMLKN 1445
            ISFA NQ    P          Q       YWSD L+LSPRG+MMMMNRLG DGR +   
Sbjct: 144  ISFAQNQQLAMPSDSSPSALTYQQQQQLYQYWSDALNLSPRGRMMMMNRLGADGRPLFSQ 203

Query: 1444 PMPYTSTSTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRG 1265
            P+   +T TKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAF+LRG
Sbjct: 204  PIQPINT-TKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFRLRG 262

Query: 1264 ENARLNFPHLFLGRNSSEQAAATTVPPPTSQENXXXXXXXXXXXXXXXXSRYMEFTQIPQ 1085
            ENARLNFP LFL +  +   +  T   P  Q +                         PQ
Sbjct: 263  ENARLNFPELFLNKEKTNPTSPQTRENPDLQASGTQSMPPPPPP--------------PQ 308

Query: 1084 DSLNEDLDKPNSPGNSSSGFDLSEVTASSEVYEPTTTTSMAG-----EGPSEFVWGD-MD 923
             S  ++ D  N  G  SSG      T S EV +P    S  G      G  E VWGD M 
Sbjct: 309  QSQGDNPD--NDSGMGSSG-----ATVSDEV-QPVVEGSDTGRGEGVSGSQELVWGDMMT 360

Query: 922  EAWFNTLSTGWGPTSPVWDNFDSTNNQLLQSHFNIPNSQPFEFNSSNFQKEQDH 761
            EAWFN++S GWGP SPVWD+ D+ NN LLQSH ++P      F S N ++++ H
Sbjct: 361  EAWFNSISAGWGPGSPVWDDLDTNNNLLLQSH-DLP------FGSPNHEQQEQH 407


>ref|XP_002267468.1| PREDICTED: ethylene-responsive transcription factor ERF054-like
            [Vitis vinifera]
          Length = 465

 Score =  270 bits (690), Expect = 1e-69
 Identities = 176/436 (40%), Positives = 215/436 (49%), Gaps = 42/436 (9%)
 Frame = -3

Query: 1888 DFNSVERQQQWKPVFEEASISPRPSKKTKSPERQXXXXXXXXXXXXXXXXXXXXXS---- 1721
            DF+    ++QWKPVF EAS+S RP KK +SPER+                     S    
Sbjct: 30   DFDLSLERRQWKPVFGEASMSNRPLKKIRSPERRDSSLSSSSSSLAYQPPSPSLPSTVSA 89

Query: 1720 ------------RLIFPFSYDGXXXXXXXXXXXXXXXXXXXXXXXXXXXQ----MISFAA 1589
                        R++FPF++DG                           Q    MISFA 
Sbjct: 90   SSAACLNLPPSSRIVFPFAFDGSQQMEIPQQFRTAPLAMFPPPPMQRTSQNQQQMISFAP 149

Query: 1588 NQH-----------GYSPXXXXXXXXXXQYWSDTLHLSPRGKMMMMNRLGQDGRAMLKNP 1442
              H           G S           QYWSD L+LSPRG+MMMMNRL QDGR   +  
Sbjct: 150  QHHHSMASYPAFLAGDSGLQQQQQQQLLQYWSDALNLSPRGRMMMMNRLNQDGRNFFRPQ 209

Query: 1441 MPYTSTSTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGE 1262
             P  ST TKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAA+AYDREAFKLRGE
Sbjct: 210  APPIST-TKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGE 268

Query: 1261 NARLNFPHLFLGRNSSEQAA--ATTVPPPTSQENXXXXXXXXXXXXXXXXSRYM--EFTQ 1094
            NARLNFP LFL ++ +   A  +++  PPT  EN                      E   
Sbjct: 269  NARLNFPELFLNKDKAGSTAPSSSSSSPPTPHENSLWGRSQNQPQQAPEGLNLQDSEVGM 328

Query: 1093 IPQDSLNEDLDKPNSPGNSSSGFDLSEVTA-SSEVYEPTTTTSMAGEGPSEFVWGDMDEA 917
            +P  + +   D  N  G        SE  A + EV + +       E P E VWG+M EA
Sbjct: 329  LPPPAPSPGYDSNNELGLVLGS---SEAAARNDEVQKSSNAGESVSESPPESVWGEMAEA 385

Query: 916  WFNTLSTGWGPTSPVWDNFDSTNNQLLQSHFNIPNS----QPFEFNSSNFQKEQDHF--P 755
            WFN +  GWGP S VWD+ D++NN LLQS+ +  N+    Q   FN  ++ ++QD+    
Sbjct: 386  WFNAIPAGWGPGSAVWDDLDTSNNLLLQSNVHFGNAHQQQQQQAFNDPDYGRQQDNLDSA 445

Query: 754  XXXXXXXXSMKFFWED 707
                       FFW D
Sbjct: 446  SSSSSSCPMRPFFWRD 461


>ref|XP_002319909.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa]
            gi|148372108|gb|ABQ62985.1| RAP2-like protein [Populus
            trichocarpa] gi|222858285|gb|EEE95832.1| AP2/ERF
            domain-containing transcription factor [Populus
            trichocarpa]
          Length = 469

 Score =  268 bits (686), Expect = 4e-69
 Identities = 173/424 (40%), Positives = 213/424 (50%), Gaps = 51/424 (12%)
 Frame = -3

Query: 1903 EKGSRDFNSVERQQQWKPVFEEASISPRPSKKTKSPERQXXXXXXXXXXXXXXXXXXXXX 1724
            ++G ++ +    ++QWKPVF EAS+  RP KK  SPERQ                     
Sbjct: 31   DRGKKEADVSFERRQWKPVFGEASLMDRPLKKICSPERQEQIQSSASLAHQLPSCFSVSS 90

Query: 1723 S----------------------RLIFPFSYDGXXXXXXXXXXXXXXXXXXXXXXXXXXX 1610
            S                      RL+FPF+++G                           
Sbjct: 91   SSASTLSLYPPSSSPSPMSSSSSRLVFPFAFEGSNQPIQCPQQFRTNPSLPIFHPLSQVA 150

Query: 1609 Q----MISFAANQ-HG--YSPXXXXXXXXXXQ---------YWSDTLHLSPRGKMMMMNR 1478
            Q    MISF  NQ HG  Y P                    YWSD L+LSPRG+MMMMN+
Sbjct: 151  QNQQQMISFGQNQQHGIAYPPFYAGGLPMADHHHHQQQLFQYWSDALNLSPRGRMMMMNK 210

Query: 1477 LGQDGRAMLKNPMPYTSTSTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAM 1298
            LG DGR + + P+   +T  KLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAA+
Sbjct: 211  LGPDGRPLFRPPIQPINTR-KLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAL 269

Query: 1297 AYDREAFKLRGENARLNFPHLFLGRNSSEQAA--ATTVPPPTSQENXXXXXXXXXXXXXX 1124
            AYDREAFKLRGENARLNFP LFL ++ +   A  +T   PPTS ++              
Sbjct: 270  AYDREAFKLRGENARLNFPELFLNKDKATSTAPSSTVSSPPTSNQS-------------L 316

Query: 1123 XXSRYMEFTQIPQDSLNEDLDKPNSP--------GNSSSGFDLSEVTASSEVYEPTTTTS 968
               +  E   +  ++++  +  P  P         +  SG   S  T S E+ +     S
Sbjct: 317  KPKQAQEGLNLQAETMSPPILPPQPPPEQPPGDHPDDDSGMGSSGATVSDEI-QAVAEGS 375

Query: 967  MAGEGPS---EFVWGDMDEAWFNTLSTGWGPTSPVWDNFDSTNNQLLQSHFNIPNSQPFE 797
             AGEG S   E  WGDM EAW+N +  GWGP SPVWD+ DSTNN LLQSH    N    +
Sbjct: 376  SAGEGISGSQELEWGDMAEAWYNAIQAGWGPGSPVWDDLDSTNNLLLQSHLPFVNPNQQQ 435

Query: 796  FNSS 785
            FN S
Sbjct: 436  FNDS 439


>ref|XP_003540897.1| PREDICTED: ethylene-responsive transcription factor ERF053-like
            [Glycine max]
          Length = 406

 Score =  251 bits (641), Expect = 6e-64
 Identities = 163/395 (41%), Positives = 204/395 (51%), Gaps = 15/395 (3%)
 Frame = -3

Query: 1903 EKGSR-DFNSVERQQQWKPVFEEASISPRPSKKTKSPERQXXXXXXXXXXXXXXXXXXXX 1727
            EKG R D +S  RQ  WKPVF++AS+S RP KK +SPE +                    
Sbjct: 32   EKGKRLDLSSGRRQ--WKPVFDDASVSHRPLKKIRSPEPENPNQQQQQQPSSMLSLQPPS 89

Query: 1726 XSRLIFPFSYDGXXXXXXXXXXXXXXXXXXXXXXXXXXXQMISFAANQH-GYSPXXXXXX 1550
              R++FPF+++G                           QMISF  +Q+ GY P      
Sbjct: 90   S-RIVFPFAFEGSQHPMPFPHPFGTTNLPLFRPPLHPTQQMISFLPSQNMGYPPFLAPES 148

Query: 1549 XXXXQ-----------YWSDTLHLSPRGKMMMMNRLGQDGRAMLKNPMPYTSTSTKLYRG 1403
                +           YWSD L+LSPRG+MMMMNR   +GR ML+ P      +TKLYRG
Sbjct: 149  TMPHEHQQHHHQQLLQYWSDALNLSPRGRMMMMNRT--EGRQMLR-PQAQPLNATKLYRG 205

Query: 1402 VRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPHLFLGR 1223
            VRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENA+LNFP LFL +
Sbjct: 206  VRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENAKLNFPELFLNK 265

Query: 1222 NSSEQAAATTVPPPTSQENXXXXXXXXXXXXXXXXSRYMEFTQIPQDSLNEDLDKPNSPG 1043
            + +EQ  +TT P  +S E                             S N    +P   G
Sbjct: 266  DKAEQ--STTAPASSSNEG-------------------------STSSQNTKQPEPIPEG 298

Query: 1042 NSSSGFDLSEVTASSEVYEPTTTTSMAGEGPSEFVWGDMDEAWFNTLSTGWGPTSPVWDN 863
             +++  +    T +  V    T   ++   P E VWG+    WFN +  GWGP SPVWD+
Sbjct: 299  TTNTESEDMPPTETFAVENAVTEEGIS--QPQELVWGE----WFNAIPAGWGPGSPVWDD 352

Query: 862  FDSTNNQLLQSH--FNIPNSQPFEFNSSNFQKEQD 764
             D  NN LL S   F  PN Q F    ++ + +Q+
Sbjct: 353  LDPNNNLLLHSQLPFVNPNQQEFHDAGASSRTQQE 387


>ref|XP_002329370.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa]
            gi|222870420|gb|EEF07551.1| AP2/ERF domain-containing
            transcription factor [Populus trichocarpa]
          Length = 464

 Score =  251 bits (640), Expect = 8e-64
 Identities = 138/284 (48%), Positives = 172/284 (60%), Gaps = 8/284 (2%)
 Frame = -3

Query: 1534 YWSDTLHLSPRGKMMMMNRLGQDGRAMLKNPMPYTSTSTKLYRGVRQRHWGKWVAEIRLP 1355
            YW+D L+LSPRG+MMMMNRLG +GR + + P+   +T TKLYRGVRQRHWGKWVAEIRLP
Sbjct: 192  YWNDALNLSPRGRMMMMNRLGPNGRPLFRPPIQPINT-TKLYRGVRQRHWGKWVAEIRLP 250

Query: 1354 RNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPHLFLGR---NSSEQAAATTVPP 1184
            RNRTRLWLGTFD AEDAA+AYDREAFKLRGENA+LNFP LFL +    S+  +++ + PP
Sbjct: 251  RNRTRLWLGTFDNAEDAALAYDREAFKLRGENAKLNFPELFLNKEKETSTAPSSSVSSPP 310

Query: 1183 PTSQENXXXXXXXXXXXXXXXXSRYMEFTQIPQDSLNEDLDKPNSPGNSSSGFDLSEVTA 1004
              +Q +                   +E    P        D P    +  SG   S  T 
Sbjct: 311  TPNQSSMPKQAQEGINL-------QVETMPPPPPPEQPQGDHP----DDDSGLGSSGATV 359

Query: 1003 SSEVYEPTTTTSMAGEGPSEFVWGDMDEAWFNTLSTGWGPTSPVWDNFDSTNNQLLQSH- 827
            S EV    ++      G  E +WGDM EAW+N +  GWGP SPVWD+ D+TNN LLQSH 
Sbjct: 360  SDEVQAVGSSAGEGTSGSQELMWGDMAEAWYNAIQAGWGPGSPVWDDLDTTNNFLLQSHL 419

Query: 826  -FNIPNSQPFEFNSSNFQKEQDHF---PXXXXXXXXSMKFFWED 707
             F  PN Q F  +SS+ Q++QD+             +  FFW+D
Sbjct: 420  PFVTPNQQQFT-DSSDLQRQQDNMGSASSSSSSSFPTKPFFWKD 462


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