BLASTX nr result
ID: Coptis21_contig00005852
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00005852
(1552 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2... 145 3e-32
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] 139 2e-30
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul... 125 3e-26
ref|XP_003551381.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g... 120 8e-25
ref|XP_003518816.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g... 117 8e-24
>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
predicted protein [Populus trichocarpa]
Length = 460
Score = 145 bits (366), Expect = 3e-32
Identities = 147/457 (32%), Positives = 217/457 (47%), Gaps = 35/457 (7%)
Frame = -2
Query: 1521 EDRLSFLPESILHHILSFLPTKCAVGTSILAIRWRYHWTSVPILDFSDDLLHSTTRSYKV 1342
E + LP+++L HILSFL T+ AV TSIL+ +W + W S L F L S R
Sbjct: 25 EKSIGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTFFG--LKSPKRKL-- 80
Query: 1341 PFLKDKFMSFVYRVLLLH-DSDIHRFCLTCSHTYHVSHFNAWVSAVLKRKVKELIIKMPS 1165
FM FV RVL L S+I +F L+C S W+SA + R VK+L +++
Sbjct: 81 ------FMDFVDRVLALRGPSNIVQFYLSCEVKDDPSRVGTWISAAVNRNVKDLYLELRD 134
Query: 1164 GVHSFGLPNYLFRCGSLAILHIK-GIEDKVPALITFSSLKVLHLYFTTFHWDESVEQVTF 988
SF LP+ LF C +L L I K+P+ I+ S LK+L+LY F D S +Q+ F
Sbjct: 135 FEASFVLPHCLFNCETLTELEINMPYILKLPSSISLSCLKILNLYEVIFTDDHSTQQL-F 193
Query: 987 NLPVLEEFRMENSMLLN-VNIIVFAPLLMSLYIYE----TGSDIVDCYWKMKICAENLIS 823
+LP L E + +N V + + AP L SL I+E + + + C+ ++I +L
Sbjct: 194 SLPNLVELEIHECNWMNLVAVSISAPKLQSLDIHEPCQSSPASLGGCH--VRIFGTHLAD 251
Query: 822 LTMISRCLRAYSL-------NCL----------PTLVDASKYLVG---TRELC---NVKD 712
T+I Y L C+ T ASK L G + LC NV D
Sbjct: 252 FTIIGTLSNDYCLYESSVVETCISIFSAADKPRQTAYRASKLLEGISSAQSLCLTTNVVD 311
Query: 711 LXXXXXXXXXXXSPELASIVPKLFKVTNLGVINGDYILEGSHFVNMLCQVPNIESLVFPD 532
+ +PEL + + +T+L + + L F +++ P++ +L F
Sbjct: 312 V--------LDDAPELLAFPLEFRNLTSLLFESEESNLHSDGFWHIIYNSPHLIALQF-Y 362
Query: 531 GLALRSSGEHVRTLTILDLD---FLPHLKSVEVRCFYGWENEISVIMFLLKNARVLEKMT 361
G+++ + R LD FL LK ++V F G E E+ + FLLKNA LE M
Sbjct: 363 GVSMPKVPSNCREDWTLDPSPPCFLSCLKFIQVGRFGGDEKELDAVGFLLKNATALESMD 422
Query: 360 IISVSTLSADP--EKQMKISKRLLMLPRASGCSVIDF 256
II + D +K +I ++LL LPR S I+F
Sbjct: 423 IIYSGSARRDQGVDKTNEIHQQLLALPRWSEIGNINF 459
>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
Length = 607
Score = 139 bits (350), Expect = 2e-30
Identities = 132/462 (28%), Positives = 213/462 (46%), Gaps = 34/462 (7%)
Frame = -2
Query: 1545 LGQSSGECEDRLSFLPESILHHILSFLPTKCAVGTSILAIRWRYHWTSVPILDFSDDLLH 1366
+G E D +S LP+ +L HILSFLPTK AVGTSIL+ RWRY W SVPILDF D+L
Sbjct: 1 MGSEYEESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWL 60
Query: 1365 STTRSYKVPFLKDKFMSFVYRVLLLHD-SDIHRFCLTCSHTYHVSHFNAWVSAVLKRKVK 1189
+ + ++ F +FV VL + S I +F L ++ +W+ L+R+V+
Sbjct: 61 NPSTLVELEERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDN-NLDSVYSWICIALERRVQ 119
Query: 1188 ELIIKMPSGVHSFGLPNYLFRCGSLAILHIK-GIEDKVPALITFSSLKVLHLYFTTFHWD 1012
EL + + LP F C +L ++ + + +P + SLK LHL + D
Sbjct: 120 ELDLHLLID-WRVELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDD 178
Query: 1011 ESVEQVTFNLPVLEEFRMENSMLLN---VNIIVFAPLLMSLYIYETG----SDIVDCYWK 853
+S++++ PVLEE +E N VN+ + ++ ++ + G + D +K
Sbjct: 179 DSIQKLLSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYK 238
Query: 852 MKICAENLISLTMISRCLRAYSLNCLPTLVDASKYLVGTRELCNVKDLXXXXXXXXXXXS 673
+ + A NL L++ + Y + LP+LV A ++ ++ ++
Sbjct: 239 VVVDAPNLEYLSITDYLSKDYFVKDLPSLVKA--FIDVEQDSEEFEESPHNGGISYHGPI 296
Query: 672 PELASIVPKLFKVTNLGV-------INGDYILEGSH-----------------FVNMLCQ 565
EL + + ++ GV GDY L H N L
Sbjct: 297 YELLGRISNVKCLSLTGVTLDSLSGTIGDYKLPTFHNMTRLEFLFIGGFNWDFLPNFLHS 356
Query: 564 VPNIESLVFPDGLALRSSGEHVRTLTILDLDFLPHLKSVEVRCFYGWENEISVIMFLLKN 385
PN+E+LV G E + + HLK +E+R G + E+ + +LLKN
Sbjct: 357 SPNLEALVIETGYTNELIPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEYLLKN 416
Query: 384 ARVLEKMTIISVSTLSADPEKQMKISKRLLMLPRAS-GCSVI 262
A VL++MTI + +++ + K+LL LPR S C V+
Sbjct: 417 AEVLQQMTI---DCHESYMDQEFCVCKKLLGLPRGSRSCFVV 455
>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
[Medicago truncatula]
Length = 467
Score = 125 bits (314), Expect = 3e-26
Identities = 134/448 (29%), Positives = 197/448 (43%), Gaps = 31/448 (6%)
Frame = -2
Query: 1527 ECEDRLSFLPESILHHILSFLPTKCAVGTSILAIRWRYHWTSVPILDFSDDLLHSTTRSY 1348
+ +D +S LPE IL++ILS L T+ AV TSILA +WRY WT +P+ DF D S R+
Sbjct: 20 DMKDMISDLPEGILYYILSRLSTEEAVRTSILATKWRYLWTQLPVFDFRDS---SPKRNS 76
Query: 1347 KVPFLKDKFMSFVYRVLLLHDSD-IHRFCLTCSHT-YHVSHFNAWVSAVLKRKVKELIIK 1174
K P D + V + LLH S+ I + + T ++ +S+ L V +L +
Sbjct: 77 KSP---DCLVDLVDQ--LLHKSNRIKKLFIELPVTIVDAGKVSSMLSSALMHDVHDLTLN 131
Query: 1173 MPSGVHSFGLPNYLFRCGSLAILHIK-GIEDKVPALITFSSLKVLHLYFTTFHWDESVEQ 997
+ S F LPN SL L I G D VP I F SLK+L TF ++S ++
Sbjct: 132 LESENSRFVLPNSFSASRSLTKLDIVFGFLDSVPDGICFPSLKILSFAHVTFTNEKSAQR 191
Query: 996 VTFNLPVLEEFRMENSMLLNVNIIVFAPLLMSLYIYETGSDIVDCYWKMKICAENLISLT 817
+ PVL++ E +N+NI V P L L I+ S + KI A NL+SL+
Sbjct: 192 LFSGCPVLQDLSFEKCYWVNINISVAIPTLKKLDIFFRSSSLDRNSCMFKIDAVNLLSLS 251
Query: 816 MIS----RCLRAYSLNCLPTLVDASKYLVGTRE-------------LCNVKDLXXXXXXX 688
S C S + + +D + V E L +V+ L
Sbjct: 252 YKSNPTINCFLVNSTSIVDANIDLGFFCVQNNELHVAVFAIELFSRLGSVESLRLSDQTI 311
Query: 687 XXXXSPELA-SIVPKLFKVTNLGVINGDYILEGSHFVNMLCQVPNIESL----VFPDGLA 523
+ A ++P +T L V D E ++L + P +E L V +
Sbjct: 312 QCLNYAKSALHLLPSFKNLTRLEVHFDDPSCE--VLADILRKSPKLEFLHIYGVHLVSCS 369
Query: 522 LRSSGEHVR------TLTILDLDFLPHLKSVEVRCFYGWENEISVIMFLLKNARVLEKMT 361
SSG ++ T L F LKS ++ F G E EI ++ FLL+N +L +M
Sbjct: 370 RFSSGSYLSLDSEDWTSDSLPCCFKSSLKSCDISDFRGDEAEIRLVKFLLENVTLLREMN 429
Query: 360 IISVSTLSADPEKQMKISKRLLMLPRAS 277
I LS +K + +L L S
Sbjct: 430 IYCTGYLSKKSKKLADVRNQLQALGMGS 457
>ref|XP_003551381.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g56420-like [Glycine max]
Length = 409
Score = 120 bits (302), Expect = 8e-25
Identities = 119/423 (28%), Positives = 198/423 (46%), Gaps = 10/423 (2%)
Frame = -2
Query: 1521 EDRLSFLPESILHHILSFLPTKCAVGTSILAIRWRYHWTSVPILDFSDDLLHSTTRSYKV 1342
+DR+S LP+ +L ILS LPTK AV T IL+ RWR W +V +LDF D+ ++ +
Sbjct: 19 DDRISHLPDVLLLQILSLLPTKQAVITGILSKRWRPLWPAVSVLDFDDE----SSPEFHH 74
Query: 1341 PFLKDKFMSFVYRVLLLHDSD-IHRFCLTCSH-TYHVSHFNAWVSAVLKRKVKELIIKMP 1168
P F FVY VLLLHD+ I RF L C++ Y W+ V +R+ + + + +
Sbjct: 75 PGGLTGFAEFVYSVLLLHDAPAIERFRLRCANPNYSARDIATWLCHVARRRAERVELSLS 134
Query: 1167 SGVHSFGLPNYLFRCGSLAILHIKGIEDKVPALITFSS----LKVLHLYFTT-FHWDESV 1003
+ LP LF C +++++ + G+ + AL +FS LKVLH+ F + V
Sbjct: 135 LSRY-VALPRCLFHCDTVSVMKLNGVF--LNALASFSVSLPLLKVLHVGDRVLFGCHDYV 191
Query: 1002 EQVTFNLPVLEEFRMENSMLLNVNIIVFAPLLMSLYIYETGSDIVDCYWKMKICAENLIS 823
++ P LE+ +E++ +V A L + S + WK + L+
Sbjct: 192 VKLLAGCPALEDLVLESTYNDACGGVVCAEGNFQLDLKHLSSAKIGFSWKERCLKSMLLI 251
Query: 822 LTMIS--RCLRAYSLNCLPTLVDASKYLVGTRELCNVKDLXXXXXXXXXXXSPELASIVP 649
+S RCL + S + + L AS S +P
Sbjct: 252 FRALSNVRCL-SLSTSTVACLKHAS------------------------------TSDIP 280
Query: 648 KLFKVTNLGVINGDYILEGSHFVNMLCQVPNIESLVFPDGLALRSSGEHVRTL-TILDLD 472
K+ L + G+Y + ++L + +E L + G+ R + +L +
Sbjct: 281 VFDKLIQLEISFGNYSWD--LLASLLQRSHKLEVLTIYKEPQKYAKGQEPRWIHPLLVPE 338
Query: 471 FLPHLKSVEVRCFYGWENEISVIMFLLKNARVLEKMTIISVSTLSADPEKQMKISKRLLM 292
L HLK+ +R + G E E+ + ++++NARVLE MTI S+L + E++++I + L +
Sbjct: 339 CLLHLKTFCLREYQGLETELDFVGYIMQNARVLETMTIYISSSLGS--EEKLQIRRHLSI 396
Query: 291 LPR 283
L R
Sbjct: 397 LQR 399
>ref|XP_003518816.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine max]
Length = 421
Score = 117 bits (293), Expect = 8e-24
Identities = 119/441 (26%), Positives = 192/441 (43%), Gaps = 19/441 (4%)
Frame = -2
Query: 1518 DRLSFLPESILHHILSFLPTKCAVGTSILAIRWRYHWTSVPILDFSDDLLHSTTRSYKVP 1339
D +S LP+SI+ IL LP + AV TSIL+ +WRY W S+ L F D VP
Sbjct: 8 DLISDLPQSIIESILVQLPIRDAVRTSILSSKWRYKWASITQLVFDDKC---------VP 58
Query: 1338 FLKDK------FMSFVYRVLLLHDSDIHRFCLTCSHTYHVSHFNAWVSAVLKRKVKELII 1177
F D+ + F+ RVL LH IH+F +T S + W+ + + +KEL++
Sbjct: 59 FSNDREAVEKSVVKFITRVLFLHQGPIHKFQITNSKLQSCPEIDQWILFLSRNDIKELVM 118
Query: 1176 KMPSGVHSFGLPNYLFRCGSLAILHIKGIE-DKVPALITFSSLKVLHLYFTTFHWDESVE 1000
++ G F +P+ LF CG L L + E D + F+ L+ L+L+ D +VE
Sbjct: 119 ELGEG-EFFRIPSNLFNCGKLTRLELSRCELDPPHSFKGFAGLRSLNLHQVLISPD-AVE 176
Query: 999 QVTFNLPVLEEFRMENSMLLNVNIIVFAPLLMSLYIYETGSDIVDCYWKMKICAENLISL 820
+ P+LE + + N+ + + AP L LY+ DI C + E I++
Sbjct: 177 SLISRCPLLESLSL--AYFDNLALTICAPNLKYLYLEGEFKDI--CLEDTPLLVEISIAM 232
Query: 819 TMISRCLRAY--SLNCLPTLVDASKYLVGTRELCNVKDLXXXXXXXXXXXSPELASIVPK 646
M + S NC + K+L G L + L ++
Sbjct: 233 YMTDDIAEHFEQSSNC-----NFVKFLGGVPNLEKLVGLIYFTKYLSIGIDSVHPPMMYH 287
Query: 645 LFKVTNLGVINGDYILEGSHFVNMLCQVPNIESLVFPDGLALRSSGEHVRTLTILDLDF- 469
+ L +N + ++E + ++ PN++ L + S + DLDF
Sbjct: 288 NLESIELYQVNFEDMVEILVILRLITSSPNLKE------LQISGSSNIPVAVDTPDLDFW 341
Query: 468 ---------LPHLKSVEVRCFYGWENEISVIMFLLKNARVLEKMTIISVSTLSADPEKQM 316
L LK+V++ GW +EI I +LL + VLE ++II D E +
Sbjct: 342 EKECLSDSTLNKLKTVKLSEMGGWPHEIEFIKYLLGRSPVLETLSII---PCVFDMENNL 398
Query: 315 KISKRLLMLPRASGCSVIDFS 253
K+ L+ RAS + + F+
Sbjct: 399 KMLIELVKCRRASTRAEVIFT 419