BLASTX nr result

ID: Coptis21_contig00005830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005830
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169801.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   156   1e-36
ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   156   1e-36
dbj|BAE71224.1| putative replication protein A1 [Trifolium prate...   155   2e-36
ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   155   2e-36
ref|XP_003521207.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   154   9e-36

>ref|XP_004169801.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like, partial
           [Cucumis sativus]
          Length = 224

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/91 (82%), Positives = 84/91 (92%)
 Frame = +1

Query: 1   DIPANSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEFPAQEEEVLF 180
           DIP+NSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLP+F AQEEEVL 
Sbjct: 99  DIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLM 158

Query: 181 FSERVAQAKRLALTKVKEQGNKRKRRGGDDD 273
             ERVA+AKR++L K+KE G +++RRGGDDD
Sbjct: 159 LLERVAEAKRISLMKIKETGGRKRRRGGDDD 189


>ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Cucumis
           sativus]
          Length = 449

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/91 (82%), Positives = 84/91 (92%)
 Frame = +1

Query: 1   DIPANSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEFPAQEEEVLF 180
           DIP+NSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLP+F AQEEEVL 
Sbjct: 324 DIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLM 383

Query: 181 FSERVAQAKRLALTKVKEQGNKRKRRGGDDD 273
             ERVA+AKR++L K+KE G +++RRGGDDD
Sbjct: 384 LLERVAEAKRISLMKIKETGGRKRRRGGDDD 414


>dbj|BAE71224.1| putative replication protein A1 [Trifolium pratense]
          Length = 440

 Score =  155 bits (393), Expect = 2e-36
 Identities = 78/95 (82%), Positives = 84/95 (88%), Gaps = 4/95 (4%)
 Frame = +1

Query: 1   DIPANSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEFPAQEEEVLF 180
           DIP NSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPE+PAQEEEVL 
Sbjct: 326 DIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEYPAQEEEVLL 385

Query: 181 FSERVAQAKRLALTKVKEQGNKRKRRG----GDDD 273
             ERV++AKRLA TK+KE G K+KRRG    GDD+
Sbjct: 386 LEERVSEAKRLAATKMKESGGKKKRRGEGDSGDDE 420


>ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Vitis
           vinifera]
          Length = 470

 Score =  155 bits (393), Expect = 2e-36
 Identities = 76/90 (84%), Positives = 82/90 (91%)
 Frame = +1

Query: 1   DIPANSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEFPAQEEEVLF 180
           DIP+NSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEFPAQEEEVL 
Sbjct: 358 DIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEFPAQEEEVLL 417

Query: 181 FSERVAQAKRLALTKVKEQGNKRKRRGGDD 270
             ERV +AKR++  KVKE G K+KRRGGD+
Sbjct: 418 LLERVTEAKRISQMKVKETGGKKKRRGGDE 447


>ref|XP_003521207.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Glycine
           max]
          Length = 439

 Score =  154 bits (388), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 81/90 (90%)
 Frame = +1

Query: 1   DIPANSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEFPAQEEEVLF 180
           DIP NSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPE+PAQEEEVL 
Sbjct: 326 DIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEYPAQEEEVLL 385

Query: 181 FSERVAQAKRLALTKVKEQGNKRKRRGGDD 270
             ERV +AKRLA+ K+KE G K+KRRG +D
Sbjct: 386 LEERVGEAKRLAVMKMKETGGKKKRRGEED 415


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