BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005810
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277013.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitoch...   116   2e-30
ref|XP_002277299.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitoch...   116   2e-30
gb|AEL99152.1| peptidyl-tRNA hydrolase II (PTH2) family protein,...   112   2e-29
ref|XP_002328981.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-29
gb|AEL99151.1| peptidyl-tRNA hydrolase II (PTH2) family protein,...   110   7e-29

>ref|XP_002277013.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial isoform 1
           [Vitis vinifera] gi|297737314|emb|CBI26515.3| unnamed
           protein product [Vitis vinifera]
          Length = 181

 Score =  116 bits (290), Expect(2) = 2e-30
 Identities = 56/64 (87%), Positives = 61/64 (95%)
 Frame = +3

Query: 3   MVLVVRNDLKMGKGKIAAQCSHPTLGLYKKLLHRAPEALNRWEMCGQVKVVLKSQSEDDL 182
           MVLVVRNDLKMGKGKIAAQCSH TLGLYKKLL RAP+ALNRWE CGQVKVVLK++SE+D+
Sbjct: 70  MVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLRRAPKALNRWENCGQVKVVLKTESEEDM 129

Query: 183 LVLQ 194
           LVLQ
Sbjct: 130 LVLQ 133



 Score = 41.6 bits (96), Expect(2) = 2e-30
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = +2

Query: 194 NLRTVMDLLGPADLVDDVTGALKL 265
           N RTVM +LGPAD+VDDVTG LKL
Sbjct: 157 NSRTVMAILGPADMVDDVTGGLKL 180


>ref|XP_002277299.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial isoform 2
           [Vitis vinifera]
          Length = 173

 Score =  116 bits (290), Expect(2) = 2e-30
 Identities = 56/64 (87%), Positives = 61/64 (95%)
 Frame = +3

Query: 3   MVLVVRNDLKMGKGKIAAQCSHPTLGLYKKLLHRAPEALNRWEMCGQVKVVLKSQSEDDL 182
           MVLVVRNDLKMGKGKIAAQCSH TLGLYKKLL RAP+ALNRWE CGQVKVVLK++SE+D+
Sbjct: 62  MVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLRRAPKALNRWENCGQVKVVLKTESEEDM 121

Query: 183 LVLQ 194
           LVLQ
Sbjct: 122 LVLQ 125



 Score = 41.6 bits (96), Expect(2) = 2e-30
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = +2

Query: 194 NLRTVMDLLGPADLVDDVTGALKL 265
           N RTVM +LGPAD+VDDVTG LKL
Sbjct: 149 NSRTVMAILGPADMVDDVTGGLKL 172


>gb|AEL99152.1| peptidyl-tRNA hydrolase II (PTH2) family protein, partial [Silene
           latifolia]
          Length = 176

 Score =  112 bits (281), Expect(2) = 2e-29
 Identities = 53/64 (82%), Positives = 61/64 (95%)
 Frame = +3

Query: 3   MVLVVRNDLKMGKGKIAAQCSHPTLGLYKKLLHRAPEALNRWEMCGQVKVVLKSQSEDDL 182
           MVLVVRNDLKMGKGKIAAQCSH TLGL+KKL +RAP+ALNRWEMCGQVKVV+K++SE+D+
Sbjct: 65  MVLVVRNDLKMGKGKIAAQCSHATLGLFKKLQNRAPKALNRWEMCGQVKVVVKTESEEDM 124

Query: 183 LVLQ 194
           L LQ
Sbjct: 125 LALQ 128



 Score = 41.6 bits (96), Expect(2) = 2e-29
 Identities = 19/25 (76%), Positives = 22/25 (88%)
 Frame = +2

Query: 194 NLRTVMDLLGPADLVDDVTGALKLL 268
           N RTVM +LGPA++VDDVTG LKLL
Sbjct: 152 NSRTVMAILGPAEMVDDVTGGLKLL 176


>ref|XP_002328981.1| predicted protein [Populus trichocarpa] gi|222839215|gb|EEE77566.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score =  115 bits (287), Expect(2) = 3e-29
 Identities = 55/64 (85%), Positives = 60/64 (93%)
 Frame = +3

Query: 3   MVLVVRNDLKMGKGKIAAQCSHPTLGLYKKLLHRAPEALNRWEMCGQVKVVLKSQSEDDL 182
           MVLVVRNDLKMGKGKIAAQCSH TLGLYKKLLHRAP+ALNRWEMC Q KVV+K +SE+D+
Sbjct: 75  MVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLHRAPKALNRWEMCAQPKVVVKIESEEDM 134

Query: 183 LVLQ 194
           LVLQ
Sbjct: 135 LVLQ 138



 Score = 38.5 bits (88), Expect(2) = 3e-29
 Identities = 18/25 (72%), Positives = 20/25 (80%)
 Frame = +2

Query: 194 NLRTVMDLLGPADLVDDVTGALKLL 268
           N RTVM +LGP  +VDDVTG LKLL
Sbjct: 162 NSRTVMAILGPVGVVDDVTGGLKLL 186


>gb|AEL99151.1| peptidyl-tRNA hydrolase II (PTH2) family protein, partial [Silene
           latifolia]
          Length = 176

 Score =  110 bits (276), Expect(2) = 7e-29
 Identities = 52/64 (81%), Positives = 61/64 (95%)
 Frame = +3

Query: 3   MVLVVRNDLKMGKGKIAAQCSHPTLGLYKKLLHRAPEALNRWEMCGQVKVVLKSQSEDDL 182
           MVLVVRNDLKMGKGKIAAQCSH TLGL+KKL +RAP+AL+RWEMCGQVKVV+K++SE+D+
Sbjct: 65  MVLVVRNDLKMGKGKIAAQCSHATLGLFKKLQNRAPKALSRWEMCGQVKVVVKTESEEDM 124

Query: 183 LVLQ 194
           L LQ
Sbjct: 125 LALQ 128



 Score = 41.6 bits (96), Expect(2) = 7e-29
 Identities = 19/25 (76%), Positives = 22/25 (88%)
 Frame = +2

Query: 194 NLRTVMDLLGPADLVDDVTGALKLL 268
           N RTVM +LGPA++VDDVTG LKLL
Sbjct: 152 NSRTVMAILGPAEMVDDVTGGLKLL 176