BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005809
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307627.1| hypothetical protein POPTRDRAFT_715100 [Popu...   128   1e-27
sp|Q41387.1|PSBW_SPIOL RecName: Full=Photosystem II reaction cen...   125   9e-27
ref|NP_001236601.1| uncharacterized protein LOC100526966 [Glycin...   123   4e-26
gb|ABK96462.1| unknown [Populus trichocarpa x Populus deltoides]      121   1e-25
ref|NP_001235636.1| uncharacterized protein LOC100306223 [Glycin...   120   3e-25

>ref|XP_002307627.1| hypothetical protein POPTRDRAFT_715100 [Populus trichocarpa]
           gi|118486017|gb|ABK94852.1| unknown [Populus
           trichocarpa] gi|222857076|gb|EEE94623.1| hypothetical
           protein POPTRDRAFT_715100 [Populus trichocarpa]
          Length = 134

 Score =  128 bits (321), Expect = 1e-27
 Identities = 72/120 (60%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
 Frame = -1

Query: 575 MATITA-ITPTSSFVGAAIVRNASIGVSSAPVLGLPSMARRGRVSCSAEKMPSSSEXXXX 399
           MATITA  T TSS V AA+V   S+GVS +PVLGLP+MA++GRVSCS E  PS  E    
Sbjct: 1   MATITASTTTTSSLVRAALVHKPSLGVSCSPVLGLPAMAKKGRVSCSMEGKPSVEEKCKG 60

Query: 398 XXXXXXXXXXXXXXXXXXXXLVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFTY 219
                               LVDERMSTEGTGLPFGLSNNLL WIL GVF LIW LYFTY
Sbjct: 61  MSASLMAAVCAASMSSPALALVDERMSTEGTGLPFGLSNNLLVWILLGVFALIWALYFTY 120


>sp|Q41387.1|PSBW_SPIOL RecName: Full=Photosystem II reaction center W protein,
           chloroplastic; AltName: Full=PSII 6.1 kDa protein;
           Flags: Precursor gi|728716|emb|CAA59409.1| protein of
           photosystem II [Spinacia oleracea]
          Length = 137

 Score =  125 bits (314), Expect = 9e-27
 Identities = 66/123 (53%), Positives = 78/123 (63%), Gaps = 4/123 (3%)
 Frame = -1

Query: 575 MATITAITPTSSFVGAAIVRNASIGVSSAPVLGLPSMARRGRVSCSAEKMPSSSEXXXXX 396
           MATITA +  S    A++V N+ +GVSS+P+LGLPSM +R +V+CS E  PS++E     
Sbjct: 1   MATITASSSASLVARASLVHNSRVGVSSSPILGLPSMTKRSKVTCSIENKPSTTETTTTT 60

Query: 395 XXXXXXXXXXXXXXXXXXXL----VDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTLY 228
                                   VDERMSTEGTGLPFGLSNNLLGWILFGVFGLIW LY
Sbjct: 61  NKSMGASLLAAAAAATISNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWALY 120

Query: 227 FTY 219
           F Y
Sbjct: 121 FVY 123


>ref|NP_001236601.1| uncharacterized protein LOC100526966 [Glycine max]
           gi|255631268|gb|ACU16001.1| unknown [Glycine max]
          Length = 133

 Score =  123 bits (308), Expect = 4e-26
 Identities = 66/119 (55%), Positives = 74/119 (62%)
 Frame = -1

Query: 575 MATITAITPTSSFVGAAIVRNASIGVSSAPVLGLPSMARRGRVSCSAEKMPSSSEXXXXX 396
           MATI A TPT+S      V    +G SS+ VLGLP+MA+ GRV CS E+ PSSS      
Sbjct: 1   MATIIAGTPTTSITRTGHVLKRPVGASSSTVLGLPAMAKAGRVRCSMEEKPSSSSNLGMG 60

Query: 395 XXXXXXXXXXXXXXXXXXXLVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFTY 219
                              LVDER+STEGTGLPFGLSNNLLGWILFGVFGLIW L+F Y
Sbjct: 61  ASLLAAAAAATMSSPAAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALFFVY 119


>gb|ABK96462.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 133

 Score =  121 bits (304), Expect = 1e-25
 Identities = 65/119 (54%), Positives = 76/119 (63%)
 Frame = -1

Query: 575 MATITAITPTSSFVGAAIVRNASIGVSSAPVLGLPSMARRGRVSCSAEKMPSSSEXXXXX 396
           MATITA T TSS V AA+    S+GVSS+ VLGLP++A++G+VSCS E  P+  E     
Sbjct: 1   MATITASTATSSIVRAALAHRPSVGVSSSHVLGLPAIAKKGKVSCSMEGKPTVEEKSKGM 60

Query: 395 XXXXXXXXXXXXXXXXXXXLVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFTY 219
                              LVDER+STEGTGLPFGLSNNLL WIL GVF  IW+LYF Y
Sbjct: 61  SASLMAAVCAATISSPALALVDERLSTEGTGLPFGLSNNLLVWILLGVFAFIWSLYFVY 119


>ref|NP_001235636.1| uncharacterized protein LOC100306223 [Glycine max]
           gi|255627917|gb|ACU14303.1| unknown [Glycine max]
          Length = 132

 Score =  120 bits (301), Expect = 3e-25
 Identities = 65/119 (54%), Positives = 74/119 (62%)
 Frame = -1

Query: 575 MATITAITPTSSFVGAAIVRNASIGVSSAPVLGLPSMARRGRVSCSAEKMPSSSEXXXXX 396
           MATI A  PT+S   A +V    +G SS+ VLGLP+MA+ G+V CS E+ PSSS      
Sbjct: 1   MATIIAGIPTTSITRAGLVLKRPVGASSSTVLGLPAMAKAGKVRCSMEEKPSSSSNIGMG 60

Query: 395 XXXXXXXXXXXXXXXXXXXLVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFTY 219
                               VDER+STEGTGLPFGLSNNLLGWILFGVFGLIW LYF Y
Sbjct: 61  ASLLAAAVAATMSSPAMAL-VDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVY 118