BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005807
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539900.1| PREDICTED: zinc finger CCCH domain-containin...   201   1e-49
ref|XP_003539907.1| PREDICTED: zinc finger CCCH domain-containin...   197   3e-48
ref|XP_003533499.1| PREDICTED: zinc finger CCCH domain-containin...   192   7e-47
ref|XP_003534377.1| PREDICTED: zinc finger CCCH domain-containin...   189   4e-46
ref|XP_002303898.1| predicted protein [Populus trichocarpa] gi|2...   179   8e-43

>ref|XP_003539900.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
            [Glycine max]
          Length = 698

 Score =  201 bits (511), Expect = 1e-49
 Identities = 131/297 (44%), Positives = 160/297 (53%), Gaps = 41/297 (13%)
 Frame = +2

Query: 11   FHHNVKNNHIDEFHLQDHLSFLDEGPK-------DPGLFFPS-SDFATDTDAMFFNSPPP 166
            F+ N  ++ IDEF LQD LSFL++G         +P LF+P+ SDF++        +  P
Sbjct: 135  FYANGGSDPIDEFQLQDQLSFLNDGSNTSISHKNNPDLFYPTYSDFSSSPTTAADPTLFP 194

Query: 167  NWGVNNEQHRRSHSVTDIGL---DP---FGWKPCLYYARGYCKNGTSCRFFHDS---TDS 319
            ++G     HRRS SV D  L   DP    GWKPCLY+ARGYCKNGTSCRF H      D+
Sbjct: 195  SYGWGGSLHRRSCSVNDACLGTEDPNSGLGWKPCLYFARGYCKNGTSCRFLHGGLGDADA 254

Query: 320  AVFGGEFDV-MXXXXXXXXXXXXKHCQRQQQIDQCLPDTCFWFFPLHWQQMLKFLVAT*Q 496
            A+ G    + M               QR     Q +  + F + P    + + FL+   Q
Sbjct: 255  AMVGSPSKIEMMEQCHELLRSKSAQQQRLAAASQLMSSSTFPYSP----KCMNFLLQ--Q 308

Query: 497  QQNDTXXXXXXXXXXXXXXHRYGRSRIERSDFLSIPGGMANSASR*IYLTFPADSTFREE 676
            QQNDT              H++GRSR+ER+DF     GM N ASR IYLTFPADSTFREE
Sbjct: 309  QQNDTQRAAAAALMMSEDLHKFGRSRLERNDFSLNSPGMVNPASRQIYLTFPADSTFREE 368

Query: 677  DVSNYFSI-----------------------YYETMKLILAKGNPHFVCDARVLVKP 778
            DVSNYFSI                       Y ET+KLIL+KGNPHFVCDARVLVKP
Sbjct: 369  DVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKP 425


>ref|XP_003539907.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
            [Glycine max]
          Length = 704

 Score =  197 bits (500), Expect = 3e-48
 Identities = 129/299 (43%), Positives = 159/299 (53%), Gaps = 43/299 (14%)
 Frame = +2

Query: 11   FHHNVKNNHIDEFHLQDHLSFLDEGP---------KDPGLFFPS-SDFATDTDAMFFNSP 160
            F+ N  ++ IDEF LQD L+FL++G           +P +F+PS SD ++        + 
Sbjct: 140  FYANGGSDPIDEFQLQDQLAFLNDGSPTSTALSHKNNPDMFYPSNSDLSSSPTTAADPTL 199

Query: 161  PPNWGVNNEQHRRSHSVTDIGL---DP---FGWKPCLYYARGYCKNGTSCRFFHDS---T 313
             P++G     HRRS SV D  L   DP    GWKPCLY+ARGYCKNGTSCRF H      
Sbjct: 200  FPSYGWGGSLHRRSCSVNDACLGTEDPNSGLGWKPCLYFARGYCKNGTSCRFLHGGLGDA 259

Query: 314  DSAVFGGEFDV-MXXXXXXXXXXXXKHCQRQQQIDQCLPDTCFWFFPLHWQQMLKFLVAT 490
            D+A+ G    + M               QR     Q +  + F + P    + + FL+  
Sbjct: 260  DAAMVGSPSKIEMMEQCHELLRSKSGQQQRLAAASQLMASSTFPYSP----KCMNFLLQ- 314

Query: 491  *QQQNDTXXXXXXXXXXXXXXHRYGRSRIERSDFLSIPGGMANSASR*IYLTFPADSTFR 670
             QQQNDT              H++GRSR+ER+DF     GM N ASR IYLTFPADSTFR
Sbjct: 315  -QQQNDTQRAAAAALMMSEDLHKFGRSRLERNDFSLNSPGMVNPASRQIYLTFPADSTFR 373

Query: 671  EEDVSNYFSI-----------------------YYETMKLILAKGNPHFVCDARVLVKP 778
            EEDVSNYFSI                       Y ET+KLIL+KGNPHFVCDARVLVKP
Sbjct: 374  EEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKP 432


>ref|XP_003533499.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
            [Glycine max]
          Length = 696

 Score =  192 bits (488), Expect = 7e-47
 Identities = 131/308 (42%), Positives = 155/308 (50%), Gaps = 52/308 (16%)
 Frame = +2

Query: 11   FHHNVKNNHIDEFHLQDHLSFLDEGPK--------DPGLFFP------SSDFATDTDAMF 148
            ++ N  ++ +DEF LQD L+FL++G          +P LF+P      SS   T  D   
Sbjct: 128  YYANGGSDPVDEFQLQDQLAFLNDGSNTSTSHKNNNPDLFYPNNNSDLSSSPTTAADPTL 187

Query: 149  FNSPPPNWGVNNEQHRRSHSVTDIGL---DP---FGWKPCLYYARGYCKNGTSCRFFHDS 310
            F  P   WG     HRRS SV+D  L   DP    GWKPCLY+ARGYCKNGTSCRF H  
Sbjct: 188  F--PSDGWG--GSLHRRSCSVSDACLGSEDPNSGLGWKPCLYFARGYCKNGTSCRFLHGG 243

Query: 311  TDSAVFGGEFDVMXXXXXXXXXXXXKH---------CQRQQQIDQCLPDTCFWFFPLHWQ 463
               A  GG    M             H          QR     Q +  + F + P    
Sbjct: 244  LGDADVGGAAAAMVGSPSKIEMMEQCHELLRSKSFQQQRLAAASQLMASSIFPYSP---- 299

Query: 464  QMLKFLVAT*QQQNDTXXXXXXXXXXXXXXHRYGRSRIERSDFLSIPGGMANSASR*IYL 643
            + + FL+   QQQNDT              H++GRSR+ER+DF      M N ASR IYL
Sbjct: 300  KSMNFLLQ--QQQNDTQRAAAAALMMSEDLHKFGRSRLERNDFSLNSPVMVNPASRQIYL 357

Query: 644  TFPADSTFREEDVSNYFSI-----------------------YYETMKLILAKGNPHFVC 754
            TFPADSTFREEDVSNYFSI                       Y ET+KLIL+KGNPHFVC
Sbjct: 358  TFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILSKGNPHFVC 417

Query: 755  DARVLVKP 778
            DARVLVKP
Sbjct: 418  DARVLVKP 425


>ref|XP_003534377.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
            [Glycine max]
          Length = 700

 Score =  189 bits (481), Expect = 4e-46
 Identities = 125/304 (41%), Positives = 157/304 (51%), Gaps = 48/304 (15%)
 Frame = +2

Query: 11   FHHNVKNNHIDEFHLQDHLSFLDEGPK---------DPGLFFPS--SDFATDTDAMFFNS 157
            ++ N  ++ ID+F LQD LSFL++G           +P LF+P+  SD ++        +
Sbjct: 134  YYANGGSDPIDDFQLQDQLSFLNDGSPTSTAFAHKTNPDLFYPTNNSDLSSSPTTAVDPT 193

Query: 158  PPPNWGVNNEQHRRSHSVTDIGL---DP---FGWKPCLYYARGYCKNGTSCRFFHDSTDS 319
              P++G     HRRS SV D  L   DP    GWKPCLY+ARGYCKNGTSCRF H     
Sbjct: 194  LFPSYGWGGSIHRRSCSVNDACLGSEDPSSGLGWKPCLYFARGYCKNGTSCRFLHGGIGD 253

Query: 320  AVFGGEFDVMXXXXXXXXXXXXKHCQRQQQIDQ--------CLPDTCFWFFPLHWQQMLK 475
            A  GG   ++                R + + Q         +  + F + P    + + 
Sbjct: 254  ADGGGAAAMVGSPGKIEMMEQCHELLRSKSVQQQRLAAASQLMASSTFPYSP----KSMN 309

Query: 476  FLVAT*QQQNDTXXXXXXXXXXXXXXHRYGRSRIERSDFLSIPGGMANSASR*IYLTFPA 655
            FL+   QQQNDT              H++GRSR+ER+DF      M N ASR IYLTFPA
Sbjct: 310  FLLQ--QQQNDTQRAAAAALMMSEDLHKFGRSRLERNDFSLNSPVMVNPASRQIYLTFPA 367

Query: 656  DSTFREEDVSNYFSI-----------------------YYETMKLILAKGNPHFVCDARV 766
            DSTFREEDVSNYFSI                       Y ET+KLIL+KGNPHFVCDARV
Sbjct: 368  DSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILSKGNPHFVCDARV 427

Query: 767  LVKP 778
            LVKP
Sbjct: 428  LVKP 431


>ref|XP_002303898.1| predicted protein [Populus trichocarpa] gi|222841330|gb|EEE78877.1|
           predicted protein [Populus trichocarpa]
          Length = 680

 Score =  179 bits (453), Expect = 8e-43
 Identities = 123/293 (41%), Positives = 155/293 (52%), Gaps = 46/293 (15%)
 Frame = +2

Query: 38  IDEFHLQDHLSFLDE-----GPKDPGLFFPSSDFATD----TDAMFFNSPPPNWGVNNEQ 190
           +DEF LQD LSFL++     GPK   LF+P  D  +     +D+M F   P  WG     
Sbjct: 132 MDEFQLQDQLSFLNDNSQNLGPKSSDLFYPQLDALSSPTGASDSMMF---PSYWG--GSV 186

Query: 191 HRRSHSVTDI--GLDP---FGWKPCLYYARGYCKNGTSCRFFH----DSTDSAVFGG--- 334
           HRRS SV+D+    DP   FGW+PCLY+ARGYCKNG++CRF H    +   + V G    
Sbjct: 187 HRRSCSVSDVLGSEDPNSGFGWRPCLYFARGYCKNGSNCRFVHGGLGELDGAGVVGSPNS 246

Query: 335 --EFDVMXXXXXXXXXXXXKHCQRQQQIDQCLPDTCFWFFPLHWQQMLKFLVAT*QQQND 508
             + D+M             H QR     Q +  +   F   +  + + FL+   QQQND
Sbjct: 247 NNKIDMMDQCHELLRSKSA-HQQRLAAASQLMSSSAASF--PYSPKSMNFLLQ--QQQND 301

Query: 509 TXXXXXXXXXXXXXXHRYGRSRIERSDFLSIPGGMANSASR*IYLTFPADSTFREEDVSN 688
           +              H++GRSR++R+D       + N ASR IYLTFPADSTFREEDVSN
Sbjct: 302 SQRAAATALMMGEDMHKFGRSRLDRND-------LVNPASRQIYLTFPADSTFREEDVSN 354

Query: 689 YFSI-----------------------YYETMKLILAKGNPHFVCDARVLVKP 778
           YFSI                       Y ET+K+ILAKGNPHFVCDARVLVKP
Sbjct: 355 YFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKP 407