BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005797
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519001.1| PREDICTED: tryptophan synthase beta chain 2,...   229   4e-58
ref|XP_003551899.1| PREDICTED: tryptophan synthase beta chain 2,...   226   2e-57
dbj|BAD83779.1| tryptophan synthase beta subunit [Polygonum tinc...   220   1e-55
sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta ch...   220   2e-55
ref|XP_003599947.1| Tryptophan synthase beta chain [Medicago tru...   218   6e-55

>ref|XP_003519001.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
           [Glycine max]
          Length = 479

 Score =  229 bits (583), Expect = 4e-58
 Identities = 116/143 (81%), Positives = 125/143 (87%), Gaps = 1/143 (0%)
 Frame = +3

Query: 174 CTLTTKVASPLHIEVNEKNTN-STILQRPDSFGRFGKFGGKYVPETLMHALTELESAFRL 350
           C+LT    S + +E + K  N S +LQRPDSFGRFGKFGGKYVPETLMHALTELE+AF  
Sbjct: 56  CSLTKDPYSVVPLEEHSKMDNGSVLLQRPDSFGRFGKFGGKYVPETLMHALTELEAAFYS 115

Query: 351 LASDEAFQKELGGILKDYVGRETPLYFAERLTEHYKGPNGEGPDIYLKREDLNHTGAHKI 530
           L++DE FQKEL GILKDYVGRE+PLYFAERLTEHYK PNGEGP IYLKREDLNHTGAHKI
Sbjct: 116 LSADEEFQKELAGILKDYVGRESPLYFAERLTEHYKRPNGEGPHIYLKREDLNHTGAHKI 175

Query: 531 NNAVAQALLAKRLGKKRIIAETG 599
           NNAVAQALLAKRLGKKRIIAETG
Sbjct: 176 NNAVAQALLAKRLGKKRIIAETG 198


>ref|XP_003551899.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
           [Glycine max]
          Length = 471

 Score =  226 bits (577), Expect = 2e-57
 Identities = 114/143 (79%), Positives = 126/143 (88%), Gaps = 1/143 (0%)
 Frame = +3

Query: 174 CTLTTKVASPLHIEVNEKNTN-STILQRPDSFGRFGKFGGKYVPETLMHALTELESAFRL 350
           C+LT   +S + +E ++K  N S +LQRPDSFGRFGKFGGKYVPETLMHAL++LE+AF  
Sbjct: 48  CSLTRDSSSVVPLEEHDKMGNGSVLLQRPDSFGRFGKFGGKYVPETLMHALSQLEAAFYS 107

Query: 351 LASDEAFQKELGGILKDYVGRETPLYFAERLTEHYKGPNGEGPDIYLKREDLNHTGAHKI 530
           LA+DE FQ EL GILKDYVGRE+PLYFAERLTEHYK PNGEGP IYLKREDLNHTGAHKI
Sbjct: 108 LAADEEFQTELAGILKDYVGRESPLYFAERLTEHYKRPNGEGPHIYLKREDLNHTGAHKI 167

Query: 531 NNAVAQALLAKRLGKKRIIAETG 599
           NNAVAQALLAKRLGKKRIIAETG
Sbjct: 168 NNAVAQALLAKRLGKKRIIAETG 190


>dbj|BAD83779.1| tryptophan synthase beta subunit [Polygonum tinctorium]
          Length = 474

 Score =  220 bits (561), Expect = 1e-55
 Identities = 109/142 (76%), Positives = 118/142 (83%)
 Frame = +3

Query: 174 CTLTTKVASPLHIEVNEKNTNSTILQRPDSFGRFGKFGGKYVPETLMHALTELESAFRLL 353
           C +T +      ++ +  +    +LQRPDSFGRFGKFGGKYVPETLMHAL ELE+AF  L
Sbjct: 52  CVMTREDLGAKSLKADAADQEPLLLQRPDSFGRFGKFGGKYVPETLMHALDELETAFHSL 111

Query: 354 ASDEAFQKELGGILKDYVGRETPLYFAERLTEHYKGPNGEGPDIYLKREDLNHTGAHKIN 533
           A+D  FQKEL GILKDYVGRETPLYFAERLTEHYK PNGEGP IYLKREDLNHTGAHKIN
Sbjct: 112 ATDVEFQKELDGILKDYVGRETPLYFAERLTEHYKRPNGEGPQIYLKREDLNHTGAHKIN 171

Query: 534 NAVAQALLAKRLGKKRIIAETG 599
           NAVAQALLAKRLGK RIIAETG
Sbjct: 172 NAVAQALLAKRLGKTRIIAETG 193


>sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta chain 2, chloroplastic;
           Flags: Precursor gi|2792520|gb|AAB97087.1| tryptophan
           synthase beta subunit [Camptotheca acuminata]
           gi|2801771|gb|AAB97526.1| tryptophan synthase beta
           [Camptotheca acuminata]
          Length = 466

 Score =  220 bits (560), Expect = 2e-55
 Identities = 108/130 (83%), Positives = 115/130 (88%)
 Frame = +3

Query: 210 IEVNEKNTNSTILQRPDSFGRFGKFGGKYVPETLMHALTELESAFRLLASDEAFQKELGG 389
           +E         +LQRPDSFGRFGKFGGKYVPETLM+ALTELESAFR L+ D+ FQKEL G
Sbjct: 56  MEKERSEREPDVLQRPDSFGRFGKFGGKYVPETLMYALTELESAFRSLSGDQVFQKELDG 115

Query: 390 ILKDYVGRETPLYFAERLTEHYKGPNGEGPDIYLKREDLNHTGAHKINNAVAQALLAKRL 569
           ILKDYVGRE+PLYFAERLT HYK PNGEGP+IYLKREDLNHTGAHKINNAVAQALLAKRL
Sbjct: 116 ILKDYVGRESPLYFAERLTLHYKRPNGEGPEIYLKREDLNHTGAHKINNAVAQALLAKRL 175

Query: 570 GKKRIIAETG 599
           GKKRIIAETG
Sbjct: 176 GKKRIIAETG 185


>ref|XP_003599947.1| Tryptophan synthase beta chain [Medicago truncatula]
           gi|355488995|gb|AES70198.1| Tryptophan synthase beta
           chain [Medicago truncatula]
          Length = 466

 Score =  218 bits (555), Expect = 6e-55
 Identities = 107/121 (88%), Positives = 111/121 (91%)
 Frame = +3

Query: 237 STILQRPDSFGRFGKFGGKYVPETLMHALTELESAFRLLASDEAFQKELGGILKDYVGRE 416
           S +LQRPDSFGRFGKFGGKYVPETLMHALT LE++F  LA DE FQKEL GILKDYVGRE
Sbjct: 65  SVVLQRPDSFGRFGKFGGKYVPETLMHALTLLEASFHSLAGDEDFQKELAGILKDYVGRE 124

Query: 417 TPLYFAERLTEHYKGPNGEGPDIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAET 596
           TPLYFAERLTEHYK  NGEGP IYLKREDLNHTGAHKINNAVAQALLAK+LGKKRIIAET
Sbjct: 125 TPLYFAERLTEHYKNANGEGPHIYLKREDLNHTGAHKINNAVAQALLAKKLGKKRIIAET 184

Query: 597 G 599
           G
Sbjct: 185 G 185