BLASTX nr result

ID: Coptis21_contig00005787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005787
         (1100 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168263.1| PREDICTED: uncharacterized protein At3g15000...   117   4e-24
ref|XP_004137307.1| PREDICTED: uncharacterized protein At3g15000...   117   4e-24
ref|XP_004143682.1| PREDICTED: uncharacterized protein At3g15000...   115   2e-23
ref|XP_003540481.1| PREDICTED: uncharacterized protein At3g15000...   110   5e-22
ref|XP_003543219.1| PREDICTED: uncharacterized protein At3g15000...   110   6e-22

>ref|XP_004168263.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like,
           partial [Cucumis sativus]
          Length = 278

 Score =  117 bits (294), Expect = 4e-24
 Identities = 63/134 (47%), Positives = 87/134 (64%)
 Frame = -2

Query: 910 NSPTYVWLEAEQRYLIIRPEELPAHDCEYWQIYLEAPEDKLSRDEIIDKYVKTLAIVLGS 731
           N P   W     +  I+    L   D E+W + +E P+++L+RDEIID Y+KTLA+V+GS
Sbjct: 79  NDPNPNWSNRPPKETIL----LDGCDFEHWLVVMEKPDEQLTRDEIIDSYIKTLAMVVGS 134

Query: 730 EEEARKKIYSVSTRFSFFFVCNVPQKIAHQLMVLPGVTAIQDVSDDMLKRADFLETGEPF 551
           EEEAR KIYSVSTR  F F C V +++++++  LP V  +   S   +K  D+   GEPF
Sbjct: 135 EEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKNKDY--GGEPF 192

Query: 550 VDGQAVPYDPIYHK 509
           +DGQAVPYDP YH+
Sbjct: 193 IDGQAVPYDPKYHE 206


>ref|XP_004137307.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
           [Cucumis sativus]
          Length = 410

 Score =  117 bits (294), Expect = 4e-24
 Identities = 63/134 (47%), Positives = 87/134 (64%)
 Frame = -2

Query: 910 NSPTYVWLEAEQRYLIIRPEELPAHDCEYWQIYLEAPEDKLSRDEIIDKYVKTLAIVLGS 731
           N P   W     +  I+    L   D E+W + +E P+++L+RDEIID Y+KTLA+V+GS
Sbjct: 79  NDPNPNWSNRPPKETIL----LDGCDFEHWLVVMEKPDEQLTRDEIIDSYIKTLAMVVGS 134

Query: 730 EEEARKKIYSVSTRFSFFFVCNVPQKIAHQLMVLPGVTAIQDVSDDMLKRADFLETGEPF 551
           EEEAR KIYSVSTR  F F C V +++++++  LP V  +   S   +K  D+   GEPF
Sbjct: 135 EEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKNKDY--GGEPF 192

Query: 550 VDGQAVPYDPIYHK 509
           +DGQAVPYDP YH+
Sbjct: 193 IDGQAVPYDPKYHE 206


>ref|XP_004143682.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
           [Cucumis sativus] gi|449531840|ref|XP_004172893.1|
           PREDICTED: uncharacterized protein At3g15000,
           mitochondrial-like [Cucumis sativus]
          Length = 350

 Score =  115 bits (288), Expect = 2e-23
 Identities = 62/134 (46%), Positives = 86/134 (64%)
 Frame = -2

Query: 910 NSPTYVWLEAEQRYLIIRPEELPAHDCEYWQIYLEAPEDKLSRDEIIDKYVKTLAIVLGS 731
           N P   W     +  I+    L   D E+W I +E P+++L+RDEIID Y+KTLA+V+GS
Sbjct: 81  NDPNPNWSNRPPKETIL----LDGCDFEHWLIVMEKPDEQLTRDEIIDSYIKTLAMVVGS 136

Query: 730 EEEARKKIYSVSTRFSFFFVCNVPQKIAHQLMVLPGVTAIQDVSDDMLKRADFLETGEPF 551
           EEEAR KIYSVSTR  F F C V +++++++  LP V  +  + D  L   +    GEPF
Sbjct: 137 EEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWV--LPDSYLDVKNKSYGGEPF 194

Query: 550 VDGQAVPYDPIYHK 509
           + GQAVPYDP+YH+
Sbjct: 195 IHGQAVPYDPMYHE 208


>ref|XP_003540481.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
           [Glycine max]
          Length = 363

 Score =  110 bits (276), Expect = 5e-22
 Identities = 67/149 (44%), Positives = 89/149 (59%)
 Frame = -2

Query: 955 ALGTRHYSSTCDRDPNSPTYVWLEAEQRYLIIRPEELPAHDCEYWQIYLEAPEDKLSRDE 776
           AL TR  +S+     N P   W     +  I+    L   D E+W + +E PE   +RD+
Sbjct: 63  ALSTRATTSSL----NDPNPNWSNRPPKETIL----LDGCDFEHWLVVMEKPEGDPTRDD 114

Query: 775 IIDKYVKTLAIVLGSEEEARKKIYSVSTRFSFFFVCNVPQKIAHQLMVLPGVTAIQDVSD 596
           IID Y+KTLA V+GSEEEAR KIYSVSTR  F F   V ++++ +L  LPGV  +   S 
Sbjct: 115 IIDSYIKTLAKVIGSEEEARMKIYSVSTRHYFAFGALVSEELSIKLKELPGVRWVLPDSY 174

Query: 595 DMLKRADFLETGEPFVDGQAVPYDPIYHK 509
             +K  D+   GEPF++GQAVPYDP YH+
Sbjct: 175 LNVKEKDY--GGEPFINGQAVPYDPKYHE 201


>ref|XP_003543219.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
           [Glycine max]
          Length = 401

 Score =  110 bits (275), Expect = 6e-22
 Identities = 65/149 (43%), Positives = 89/149 (59%)
 Frame = -2

Query: 955 ALGTRHYSSTCDRDPNSPTYVWLEAEQRYLIIRPEELPAHDCEYWQIYLEAPEDKLSRDE 776
           AL TR  +S+     N P   W     +  I+    L   D E+W + +E PE   +RD+
Sbjct: 61  ALSTRATTSSL----NDPNPNWSNRPPKETIL----LDGCDFEHWLVVMEKPEGDPTRDD 112

Query: 775 IIDKYVKTLAIVLGSEEEARKKIYSVSTRFSFFFVCNVPQKIAHQLMVLPGVTAIQDVSD 596
           IID Y+KTLA V+GSEEEAR KIYSVSTR  F F   V +++++++  LPGV  +   S 
Sbjct: 113 IIDSYIKTLAKVIGSEEEARMKIYSVSTRHYFAFGALVSEELSYKIKELPGVRWVLPDSY 172

Query: 595 DMLKRADFLETGEPFVDGQAVPYDPIYHK 509
             +K  D+   GEPF++GQA PYDP YH+
Sbjct: 173 LNVKEKDY--GGEPFINGQAAPYDPKYHE 199


Top