BLASTX nr result
ID: Coptis21_contig00005672
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00005672
(2112 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002309513.1| serine hydroxymethyltransferase 8 [Populus t... 787 0.0
gb|ABO61383.1| plastid serine hydroxymethyltransferase [Populus ... 783 0.0
ref|XP_002519806.1| serine hydroxymethyltransferase, putative [R... 785 0.0
ref|XP_002277146.1| PREDICTED: serine hydroxymethyltransferase, ... 792 0.0
ref|XP_004147741.1| PREDICTED: serine hydroxymethyltransferase, ... 779 0.0
>ref|XP_002309513.1| serine hydroxymethyltransferase 8 [Populus trichocarpa]
gi|222855489|gb|EEE93036.1| serine
hydroxymethyltransferase 8 [Populus trichocarpa]
Length = 529
Score = 787 bits (2032), Expect(2) = 0.0
Identities = 384/448 (85%), Positives = 416/448 (92%)
Frame = +2
Query: 416 DENGFVDYGLAEVDPEVHSLIGKEKQRQFKSLELIASENFTSQAVMEAVGSCLTNKYSEG 595
D + F DYGL E DPEV +I KEK RQFKSLELIASENFTS+AVMEAVGSCLTNKYSEG
Sbjct: 74 DISSFKDYGLGEADPEVLEIINKEKDRQFKSLELIASENFTSRAVMEAVGSCLTNKYSEG 133
Query: 596 LPGKRYYGGNEYIDELETLCQQRALSAYHLDGKKWGVNVQPLSGSPANFAVYTALLSPHD 775
LPGKRYYGGNEYIDELETLCQ+RAL++++LDGKKWGVNVQPLSGSPANF VYTALL PHD
Sbjct: 134 LPGKRYYGGNEYIDELETLCQKRALASFNLDGKKWGVNVQPLSGSPANFEVYTALLKPHD 193
Query: 776 RIMGLDLPHGGHLSHGFMTLKRRVSATSIYFESMPYRLDESTGLIDYEMLEKTAILFRPK 955
RIMGLDLPHGGHLSHGFMT KRRVS TSIYFESMPYRLDESTGL+DY+MLEKTAILFRPK
Sbjct: 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK 253
Query: 956 LMIVGASAYPRDFDYPRVRKIADAVGAFLMMDMAHISGLVAASVVANPFEYCDVVTTTTH 1135
L+I GASAYPRDFDYPR+RKIADAVGAFLMMDMAHISGLVAASVVA+PFEYCDVVTTTTH
Sbjct: 254 LIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVADPFEYCDVVTTTTH 313
Query: 1136 KSLRGPRGGMIFFKKDTVLGVDLESSINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 1315
KSLRGPRGGMIFFKKD VLGVD+ES+INNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK
Sbjct: 314 KSLRGPRGGMIFFKKDPVLGVDMESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373
Query: 1316 AYQNQVVSNCKALASRLIELGYELVSGGSDNHLVLVDLRPLGMDGARAEKILDMASITLN 1495
AYQ QV+ N +ALA+R++ELGY+LVSGGSDNHL+LVDLRPLG+DGAR EKILDMASITLN
Sbjct: 374 AYQKQVICNSRALANRMVELGYKLVSGGSDNHLILVDLRPLGLDGARVEKILDMASITLN 433
Query: 1496 KNSVPGDKSAQIPGGIRIGTPAMTTRKFTEKEFIAIADFIHEGIQIALEAKKSAKGSKLQ 1675
KNSVPGDKSA +PGGIRIG+PAMTTR FTE EF+A AD IHEG+QI+LEAKKS GSKLQ
Sbjct: 434 KNSVPGDKSALVPGGIRIGSPAMTTRGFTETEFVATADLIHEGVQISLEAKKSVSGSKLQ 493
Query: 1676 DFMNSIGSPDFHLNDRISDLQRRVEAFT 1759
DF+ + SPDF L D++SDLQRRVEA T
Sbjct: 494 DFLKFVKSPDFPLTDKVSDLQRRVEALT 521
Score = 56.2 bits (134), Expect(2) = 0.0
Identities = 26/49 (53%), Positives = 36/49 (73%)
Frame = +3
Query: 162 MHAYCGAAVTGAVQQPIWTKGSAFPFKGNINGGLSFQVKVDFVKPCKAS 308
M A GAAV G++QQP+ +KG AFP K ++ G +QVK++ VKPC+AS
Sbjct: 1 MQATSGAAVMGSLQQPVLSKGPAFPMKRSVIIGFPYQVKLNSVKPCRAS 49
>gb|ABO61383.1| plastid serine hydroxymethyltransferase [Populus tremuloides]
Length = 529
Score = 783 bits (2021), Expect(2) = 0.0
Identities = 381/448 (85%), Positives = 417/448 (93%)
Frame = +2
Query: 416 DENGFVDYGLAEVDPEVHSLIGKEKQRQFKSLELIASENFTSQAVMEAVGSCLTNKYSEG 595
D + F DYGL+E DPEV +I KEK RQFKSLELIASENFTS+AVMEAVGSCLTNKYSEG
Sbjct: 74 DISSFKDYGLSEADPEVLEIIKKEKDRQFKSLELIASENFTSRAVMEAVGSCLTNKYSEG 133
Query: 596 LPGKRYYGGNEYIDELETLCQQRALSAYHLDGKKWGVNVQPLSGSPANFAVYTALLSPHD 775
LPGKRYYGGNEYIDELETLCQ+RAL++++LDGKKWGVNVQPLSGSPANF VYTALL PHD
Sbjct: 134 LPGKRYYGGNEYIDELETLCQKRALASFNLDGKKWGVNVQPLSGSPANFEVYTALLKPHD 193
Query: 776 RIMGLDLPHGGHLSHGFMTLKRRVSATSIYFESMPYRLDESTGLIDYEMLEKTAILFRPK 955
RIMGLDLPHGGHLSHGFMT KRRVS TSIYFESMPYRLDESTGL+DY+MLEKTAILFRPK
Sbjct: 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK 253
Query: 956 LMIVGASAYPRDFDYPRVRKIADAVGAFLMMDMAHISGLVAASVVANPFEYCDVVTTTTH 1135
L+I GASAYPRDFDYPR+RKIADAVGAFLMMDMAHISGLV ASVVA+PFEYCDVVTTTTH
Sbjct: 254 LIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVPASVVADPFEYCDVVTTTTH 313
Query: 1136 KSLRGPRGGMIFFKKDTVLGVDLESSINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 1315
KSLRGPRGGMIFFKKD VLGVD+ES+INNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK
Sbjct: 314 KSLRGPRGGMIFFKKDPVLGVDMESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373
Query: 1316 AYQNQVVSNCKALASRLIELGYELVSGGSDNHLVLVDLRPLGMDGARAEKILDMASITLN 1495
AYQ QV+ N +ALA+R++ELGY+LVSGGSDNHL+LVDLRPLG+DGAR EKILD+ASITLN
Sbjct: 374 AYQKQVICNSRALANRMVELGYKLVSGGSDNHLILVDLRPLGLDGARVEKILDIASITLN 433
Query: 1496 KNSVPGDKSAQIPGGIRIGTPAMTTRKFTEKEFIAIADFIHEGIQIALEAKKSAKGSKLQ 1675
KNSVPGDKSA +PGGIRIG+PAMTTR FTE+EF+A AD IHEG+QI+LEAKKS GSKLQ
Sbjct: 434 KNSVPGDKSALVPGGIRIGSPAMTTRGFTEREFVATADLIHEGVQISLEAKKSVSGSKLQ 493
Query: 1676 DFMNSIGSPDFHLNDRISDLQRRVEAFT 1759
DF+ + SPDF L D++SDL+RRVEA T
Sbjct: 494 DFLKFVKSPDFPLTDKVSDLRRRVEALT 521
Score = 56.2 bits (134), Expect(2) = 0.0
Identities = 26/49 (53%), Positives = 36/49 (73%)
Frame = +3
Query: 162 MHAYCGAAVTGAVQQPIWTKGSAFPFKGNINGGLSFQVKVDFVKPCKAS 308
M A GAAV G++QQP+ +KG AFP K ++ G +QVK++ VKPC+AS
Sbjct: 1 MQATSGAAVMGSLQQPVLSKGPAFPMKRSVIIGFPYQVKLNSVKPCRAS 49
>ref|XP_002519806.1| serine hydroxymethyltransferase, putative [Ricinus communis]
gi|223541045|gb|EEF42602.1| serine
hydroxymethyltransferase, putative [Ricinus communis]
Length = 527
Score = 785 bits (2027), Expect(2) = 0.0
Identities = 384/447 (85%), Positives = 413/447 (92%)
Frame = +2
Query: 413 GDENGFVDYGLAEVDPEVHSLIGKEKQRQFKSLELIASENFTSQAVMEAVGSCLTNKYSE 592
GD + F DYGL+E DPEV +I KEK RQFKSLELIASENFTS+AVMEAVGSCLTNKYSE
Sbjct: 71 GDRSSFKDYGLSEADPEVREIIEKEKNRQFKSLELIASENFTSRAVMEAVGSCLTNKYSE 130
Query: 593 GLPGKRYYGGNEYIDELETLCQQRALSAYHLDGKKWGVNVQPLSGSPANFAVYTALLSPH 772
GLPGKRYYGGNE+IDELETLCQ+RAL+A+ LD KKWGVNVQPLSGSPANF VYTALL+PH
Sbjct: 131 GLPGKRYYGGNEHIDELETLCQERALAAFGLDRKKWGVNVQPLSGSPANFEVYTALLNPH 190
Query: 773 DRIMGLDLPHGGHLSHGFMTLKRRVSATSIYFESMPYRLDESTGLIDYEMLEKTAILFRP 952
DRIMGLDLPHGGHLSHGFMT KRRVS TSIYFESMPYRLDESTGL+DY+MLEKTA LFRP
Sbjct: 191 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTANLFRP 250
Query: 953 KLMIVGASAYPRDFDYPRVRKIADAVGAFLMMDMAHISGLVAASVVANPFEYCDVVTTTT 1132
KL+I GASAYPRDFDYPR+RKIADAVGAFLMMDMAHISGLVAASVV +PFEYCD+VTTTT
Sbjct: 251 KLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVGDPFEYCDIVTTTT 310
Query: 1133 HKSLRGPRGGMIFFKKDTVLGVDLESSINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 1312
HKSLRGPRGGMIFF+KDT+LGVDLES+INNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF
Sbjct: 311 HKSLRGPRGGMIFFRKDTILGVDLESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 370
Query: 1313 KAYQNQVVSNCKALASRLIELGYELVSGGSDNHLVLVDLRPLGMDGARAEKILDMASITL 1492
KAYQ QV+SNC+ALA RL+ELGY+LVSGGSDNHLVLVDLRPLG+DGAR EKILDMASITL
Sbjct: 371 KAYQKQVISNCRALAYRLVELGYKLVSGGSDNHLVLVDLRPLGIDGARVEKILDMASITL 430
Query: 1493 NKNSVPGDKSAQIPGGIRIGTPAMTTRKFTEKEFIAIADFIHEGIQIALEAKKSAKGSKL 1672
NKNSVPGDKSA +PGGIRIG+PAMTTR FTE+EFIA ADFIHEG+QI EAKKS GSKL
Sbjct: 431 NKNSVPGDKSALVPGGIRIGSPAMTTRGFTEREFIATADFIHEGVQITTEAKKSVSGSKL 490
Query: 1673 QDFMNSIGSPDFHLNDRISDLQRRVEA 1753
QDFM + SPDF L +SDLQ RVEA
Sbjct: 491 QDFMKLVASPDFSLASEVSDLQTRVEA 517
Score = 45.4 bits (106), Expect(2) = 0.0
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3
Query: 162 MHAYCGAAVTGAVQQPIWTKGSAFPFKGNINGGLSFQVKVDFVKPCK 302
M GA V G++QQP+W KGS+ P K + G Q+K++ +PC+
Sbjct: 1 MQGCTGAQVMGSLQQPVWIKGSSLPLKQSNFVGFPHQIKLNSFRPCR 47
>ref|XP_002277146.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial [Vitis
vinifera] gi|296081614|emb|CBI20619.3| unnamed protein
product [Vitis vinifera]
Length = 528
Score = 792 bits (2045), Expect = 0.0
Identities = 388/444 (87%), Positives = 418/444 (94%)
Frame = +2
Query: 428 FVDYGLAEVDPEVHSLIGKEKQRQFKSLELIASENFTSQAVMEAVGSCLTNKYSEGLPGK 607
F+D+GL E DPEV ++I KEKQRQ KSLELIASENFTS+AVMEAVGSCLTNKYSEGLPGK
Sbjct: 77 FIDHGLNEADPEVCAIIYKEKQRQMKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGK 136
Query: 608 RYYGGNEYIDELETLCQQRALSAYHLDGKKWGVNVQPLSGSPANFAVYTALLSPHDRIMG 787
RYYGGNE+IDELETLCQ+RAL+A+HLDGKKWGVNVQPLSGSPANF VYTALL+PHDRIMG
Sbjct: 137 RYYGGNEFIDELETLCQKRALAAFHLDGKKWGVNVQPLSGSPANFEVYTALLNPHDRIMG 196
Query: 788 LDLPHGGHLSHGFMTLKRRVSATSIYFESMPYRLDESTGLIDYEMLEKTAILFRPKLMIV 967
LDLPHGGHLSHGFMT KRRVS TSIYFESMPYRLDESTGL+DY+MLEKTA LFRPKL+I
Sbjct: 197 LDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTANLFRPKLIIA 256
Query: 968 GASAYPRDFDYPRVRKIADAVGAFLMMDMAHISGLVAASVVANPFEYCDVVTTTTHKSLR 1147
GASAYPRDFDYPR+RKIAD VGAFLMMDMAHISGLVAASVVA+PFEYCD+VTTTTHKSLR
Sbjct: 257 GASAYPRDFDYPRMRKIADGVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLR 316
Query: 1148 GPRGGMIFFKKDTVLGVDLESSINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKAYQN 1327
GPRGGMIFFKKD+VLGVDLES+INNAVFPGLQGGPHNHTIGGL+VCLKHAQSPEFKAYQN
Sbjct: 317 GPRGGMIFFKKDSVLGVDLESAINNAVFPGLQGGPHNHTIGGLSVCLKHAQSPEFKAYQN 376
Query: 1328 QVVSNCKALASRLIELGYELVSGGSDNHLVLVDLRPLGMDGARAEKILDMASITLNKNSV 1507
QVVSNC+ALA RLIELGY LVSGGSDNHL+LVDLRPLG+DGARAEKILDMASITLNKNSV
Sbjct: 377 QVVSNCRALAGRLIELGYNLVSGGSDNHLILVDLRPLGIDGARAEKILDMASITLNKNSV 436
Query: 1508 PGDKSAQIPGGIRIGTPAMTTRKFTEKEFIAIADFIHEGIQIALEAKKSAKGSKLQDFMN 1687
PGDKSA +PGGIRIG+PAMTTR F+EKEFIA ADFIHEG+Q++LEAKKS GSKL DFM
Sbjct: 437 PGDKSALVPGGIRIGSPAMTTRGFSEKEFIATADFIHEGVQLSLEAKKSVSGSKLLDFMK 496
Query: 1688 SIGSPDFHLNDRISDLQRRVEAFT 1759
+ SPDF L DR+SDLQRRVE T
Sbjct: 497 FVTSPDFSLIDRVSDLQRRVETLT 520
>ref|XP_004147741.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Cucumis sativus] gi|449519543|ref|XP_004166794.1|
PREDICTED: serine hydroxymethyltransferase,
mitochondrial-like [Cucumis sativus]
Length = 528
Score = 779 bits (2011), Expect(2) = 0.0
Identities = 378/449 (84%), Positives = 418/449 (93%)
Frame = +2
Query: 413 GDENGFVDYGLAEVDPEVHSLIGKEKQRQFKSLELIASENFTSQAVMEAVGSCLTNKYSE 592
G + FVD+ L+E DPEV S+I KEKQRQFKSLELIASENFTS+AVMEAVGSCLTNKYSE
Sbjct: 72 GGVSNFVDHALSETDPEVRSIIDKEKQRQFKSLELIASENFTSRAVMEAVGSCLTNKYSE 131
Query: 593 GLPGKRYYGGNEYIDELETLCQQRALSAYHLDGKKWGVNVQPLSGSPANFAVYTALLSPH 772
GLPGKRYYGGNE+IDELETLCQQRAL+A+HLD KWGVNVQPLSGSPANF VYTA+L+PH
Sbjct: 132 GLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPANFEVYTAVLNPH 191
Query: 773 DRIMGLDLPHGGHLSHGFMTLKRRVSATSIYFESMPYRLDESTGLIDYEMLEKTAILFRP 952
DRIMGLDLPHGGHLSHGFMT KRRVS TSIYFESMPYRLDE+TG++DY+MLEKTA LFRP
Sbjct: 192 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYDMLEKTANLFRP 251
Query: 953 KLMIVGASAYPRDFDYPRVRKIADAVGAFLMMDMAHISGLVAASVVANPFEYCDVVTTTT 1132
KL+I GASAYPRDFDYPR+RKIADAVGAFLMMDMAHISGLVAASVVA+PFEYCD+VTTTT
Sbjct: 252 KLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTT 311
Query: 1133 HKSLRGPRGGMIFFKKDTVLGVDLESSINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 1312
HKSLRGPRGGMIFF+KD VLGVDLES+INNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF
Sbjct: 312 HKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 371
Query: 1313 KAYQNQVVSNCKALASRLIELGYELVSGGSDNHLVLVDLRPLGMDGARAEKILDMASITL 1492
K YQN+V++NC+ALA+RL+ELGY+LVSGGSDNHLVLVDLRPLG+DGAR EKILDMASITL
Sbjct: 372 KVYQNKVIANCRALANRLVELGYKLVSGGSDNHLVLVDLRPLGIDGARVEKILDMASITL 431
Query: 1493 NKNSVPGDKSAQIPGGIRIGTPAMTTRKFTEKEFIAIADFIHEGIQIALEAKKSAKGSKL 1672
NKNSVPGDKSA +PGGIRIG+PAMTTR FTEKEF+A+ADFIHEG++I L+AK A GSKL
Sbjct: 432 NKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKITLDAKPLAPGSKL 491
Query: 1673 QDFMNSIGSPDFHLNDRISDLQRRVEAFT 1759
Q+F+ + + DF L DRISDL+ RVEA T
Sbjct: 492 QEFLKFVTTSDFPLTDRISDLRSRVEALT 520
Score = 36.6 bits (83), Expect(2) = 0.0
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +3
Query: 162 MHAYCGAAVTGAVQQPIWTKGSAFPFKGNINGGLSFQVKVDFVKPCKA 305
M A G AV G++Q + KGS FP K + Q K++ +KPCK+
Sbjct: 1 MQATSGVAVMGSLQVAVCGKGSCFPSKSSSICVFPQQKKMNILKPCKS 48