BLASTX nr result

ID: Coptis21_contig00005671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005671
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27785.3| unnamed protein product [Vitis vinifera]               59   4e-07
ref|XP_002277706.1| PREDICTED: transmembrane protein 184C-like [...    59   4e-07
ref|XP_002516252.1| conserved hypothetical protein [Ricinus comm...    59   5e-07
ref|XP_002324140.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_003561557.1| PREDICTED: transmembrane protein 184C-like [...    55   6e-06

>emb|CBI27785.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = +1

Query: 163 NSYFQVTDRDLHSPATIIAGSFILVALVLSIFPIFQHLRSYTNP 294
           +S +Q T R+LH PA II G F++VAL+LSI  IFQHLRSYT P
Sbjct: 35  SSAYQGTYRNLHQPAVIIGGCFVVVALILSILLIFQHLRSYTKP 78


>ref|XP_002277706.1| PREDICTED: transmembrane protein 184C-like [Vitis vinifera]
          Length = 432

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = +1

Query: 163 NSYFQVTDRDLHSPATIIAGSFILVALVLSIFPIFQHLRSYTNP 294
           +S +Q T R+LH PA II G F++VAL+LSI  IFQHLRSYT P
Sbjct: 10  SSAYQGTYRNLHQPAVIIGGCFVVVALILSILLIFQHLRSYTKP 53


>ref|XP_002516252.1| conserved hypothetical protein [Ricinus communis]
           gi|223544738|gb|EEF46254.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 418

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/35 (80%), Positives = 29/35 (82%)
 Frame = +1

Query: 190 DLHSPATIIAGSFILVALVLSIFPIFQHLRSYTNP 294
           DLH PA II G F LVA+VLSIF IFQHLRSYTNP
Sbjct: 15  DLHQPAVIIGGCFALVAVVLSIFLIFQHLRSYTNP 49


>ref|XP_002324140.1| predicted protein [Populus trichocarpa] gi|222865574|gb|EEF02705.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/41 (60%), Positives = 33/41 (80%)
 Frame = +1

Query: 172 FQVTDRDLHSPATIIAGSFILVALVLSIFPIFQHLRSYTNP 294
           ++ T RDLH PA +I G F +VA++LSI+ IFQHL+SYTNP
Sbjct: 5   YEDTYRDLHQPAVVIGGCFAIVAVLLSIYLIFQHLKSYTNP 45


>ref|XP_003561557.1| PREDICTED: transmembrane protein 184C-like [Brachypodium
           distachyon]
          Length = 461

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/50 (52%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
 Frame = +1

Query: 154 LSSNSY--FQVTDRDLHSPATIIAGSFILVALVLSIFPIFQHLRSYTNPT 297
           ++SN Y  FQ   R+LH+PA +I  +F+LVAL++S++ I QHLRSY+NP+
Sbjct: 1   MASNEYSSFQGFYRNLHTPAVLIGAAFVLVALLISLWLILQHLRSYSNPS 50


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