BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005670
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_197572.1| chaperonin 20 [Arabidopsis thaliana] gi|3068793...    92   6e-17
gb|AFK36826.1| unknown [Lotus japonicus]                               92   6e-17
gb|AFK36319.1| unknown [Lotus japonicus]                               92   6e-17
ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic ...    92   6e-17
ref|XP_004144048.1| PREDICTED: 20 kDa chaperonin, chloroplastic-...    91   1e-16

>ref|NP_197572.1| chaperonin 20 [Arabidopsis thaliana] gi|30687936|ref|NP_851045.1|
           chaperonin 20 [Arabidopsis thaliana]
           gi|334187803|ref|NP_001190350.1| chaperonin 20
           [Arabidopsis thaliana] gi|297808145|ref|XP_002871956.1|
           hypothetical protein ARALYDRAFT_488978 [Arabidopsis
           lyrata subsp. lyrata]
           gi|12643263|sp|O65282.2|CH10C_ARATH RecName: Full=20 kDa
           chaperonin, chloroplastic; AltName: Full=Chaperonin 10;
           Short=Ch-CPN10; Short=Cpn10; AltName: Full=Chaperonin
           20; AltName: Full=Protein Cpn21; Flags: Precursor
           gi|10179872|gb|AAG13931.1|AF268068_1 chaperonin 10
           [Arabidopsis thaliana]
           gi|16226815|gb|AAL16269.1|AF428339_1 AT5g20720/T1M15_120
           [Arabidopsis thaliana]
           gi|16226911|gb|AAL16296.1|AF428366_1 AT5g20720/T1M15_120
           [Arabidopsis thaliana] gi|4127456|emb|CAA09368.1| Cpn21
           protein [Arabidopsis thaliana]
           gi|14334612|gb|AAK59484.1| putative chloroplast Cpn21
           protein [Arabidopsis thaliana]
           gi|14587373|dbj|BAB61619.1| chaperonin 20 [Arabidopsis
           thaliana] gi|17065646|gb|AAL33817.1| putative
           chloroplast Cpn21 protein [Arabidopsis thaliana]
           gi|297317793|gb|EFH48215.1| hypothetical protein
           ARALYDRAFT_488978 [Arabidopsis lyrata subsp. lyrata]
           gi|332005498|gb|AED92881.1| chaperonin 20 [Arabidopsis
           thaliana] gi|332005499|gb|AED92882.1| chaperonin 20
           [Arabidopsis thaliana] gi|332005500|gb|AED92883.1|
           chaperonin 20 [Arabidopsis thaliana]
          Length = 253

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/70 (65%), Positives = 53/70 (75%)
 Frame = -3

Query: 217 SSFFPIFQHLRSYTNPAYTSVKPLGDRVHFNIKSAEEQTVGGILLPSTAQSKPQGGEVVA 38
           S F  +     S   P YTS+KPLGDRV   IK AEE+T+GGILLPSTAQSKPQGGEVVA
Sbjct: 42  SQFRRLVVKAASVVAPKYTSIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVA 101

Query: 37  VGEGKTLGNS 8
           VGEG+T+G +
Sbjct: 102 VGEGRTIGKN 111


>gb|AFK36826.1| unknown [Lotus japonicus]
          Length = 254

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/73 (63%), Positives = 56/73 (76%)
 Frame = -3

Query: 226 RWFSSFFPIFQHLRSYTNPAYTSVKPLGDRVHFNIKSAEEQTVGGILLPSTAQSKPQGGE 47
           +WF S   +     +   P +T++KPLGDRV   IK AEE+TVGGILLPSTAQSKPQGGE
Sbjct: 43  KWFPS---LVVKAATVVAPKHTAIKPLGDRVLVKIKEAEEKTVGGILLPSTAQSKPQGGE 99

Query: 46  VVAVGEGKTLGNS 8
           VVAVGEGK++GN+
Sbjct: 100 VVAVGEGKSIGNN 112


>gb|AFK36319.1| unknown [Lotus japonicus]
          Length = 254

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/73 (63%), Positives = 56/73 (76%)
 Frame = -3

Query: 226 RWFSSFFPIFQHLRSYTNPAYTSVKPLGDRVHFNIKSAEEQTVGGILLPSTAQSKPQGGE 47
           +WF S   +     +   P +T++KPLGDRV   IK AEE+TVGGILLPSTAQSKPQGGE
Sbjct: 43  KWFPS---LVVKAATVVAPKHTAIKPLGDRVLVKIKEAEEKTVGGILLPSTAQSKPQGGE 99

Query: 46  VVAVGEGKTLGNS 8
           VVAVGEGK++GN+
Sbjct: 100 VVAVGEGKSIGNN 112


>ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic [Vitis vinifera]
           gi|50660327|gb|AAT80888.1| chloroplast chaperonin 21
           [Vitis vinifera] gi|297738526|emb|CBI27771.3| unnamed
           protein product [Vitis vinifera]
          Length = 251

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/69 (65%), Positives = 54/69 (78%)
 Frame = -3

Query: 214 SFFPIFQHLRSYTNPAYTSVKPLGDRVHFNIKSAEEQTVGGILLPSTAQSKPQGGEVVAV 35
           SF  +     +   P YTS+KPLGDRV   IK+AEE+TVGGILLP+TAQ+KPQGGEVVAV
Sbjct: 41  SFRSLVVRAATVVTPKYTSLKPLGDRVLVKIKTAEEKTVGGILLPTTAQTKPQGGEVVAV 100

Query: 34  GEGKTLGNS 8
           GEGKT+G +
Sbjct: 101 GEGKTIGKN 109


>ref|XP_004144048.1| PREDICTED: 20 kDa chaperonin, chloroplastic-like isoform 2 [Cucumis
           sativus] gi|449521557|ref|XP_004167796.1| PREDICTED: 20
           kDa chaperonin, chloroplastic-like isoform 2 [Cucumis
           sativus]
          Length = 256

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/69 (65%), Positives = 53/69 (76%)
 Frame = -3

Query: 214 SFFPIFQHLRSYTNPAYTSVKPLGDRVHFNIKSAEEQTVGGILLPSTAQSKPQGGEVVAV 35
           SF  +     +   P YTS+KPLGDRV   IK AEE+T GGILLPSTAQ++PQGGEVVAV
Sbjct: 46  SFTGLVVRAATVVAPKYTSIKPLGDRVLVKIKEAEEKTDGGILLPSTAQTRPQGGEVVAV 105

Query: 34  GEGKTLGNS 8
           GEGKT+GN+
Sbjct: 106 GEGKTIGNT 114