BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005667
         (769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    72   2e-10
ref|NP_177997.1| putative F-box/FBD/LRR-repeat protein [Arabidop...    69   1e-09
ref|NP_200450.1| putative FBD-associated F-box protein [Arabidop...    64   5e-08
ref|NP_190721.3| F-box/FBD/LRR-repeat protein [Arabidopsis thali...    63   8e-08
ref|XP_002877808.1| F-box family protein [Arabidopsis lyrata sub...    63   8e-08

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
 Frame = +3

Query: 45  WIYFAIKHNV-------RVMELSFPWELFPDSVFMCHTLTELRLEYVEI-HLPRTVSFPC 200
           WI  A+  NV       R  E SF   + P  +F C TLTEL +    I  LP ++S  C
Sbjct: 116 WISAAVNRNVKDLYLELRDFEASF---VLPHCLFNCETLTELEINMPYILKLPSSISLSC 172

Query: 201 LKILKLTENVLYGEKLTENLFSSCLMLEELIIRSCSWHDFSIIISSPPNLKVLELREKED 380
           LKIL L E +   +  T+ LF S   L EL I  C+W +   +  S P L+ L++ E   
Sbjct: 173 LKILNLYEVIFTDDHSTQQLF-SLPNLVELEIHECNWMNLVAVSISAPKLQSLDIHEPCQ 231

Query: 381 GNVAS----RIRICSPNLEELKYFGPTLPR----IDEVIYSTLVTLDFESCERPCFEPDY 536
            + AS     +RI   +L +    G TL       +  +  T +++ F + ++P  +  Y
Sbjct: 232 SSPASLGGCHVRIFGTHLADFTIIG-TLSNDYCLYESSVVETCISI-FSAADKP-RQTAY 288

Query: 537 SVAGLLMGLRNVAKLSLDSYCFEVLGQDPNLEA 635
             + LL G+ +   L L +   +VL   P L A
Sbjct: 289 RASKLLEGISSAQSLCLTTNVVDVLDDAPELLA 321


>ref|NP_177997.1| putative F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|75268063|sp|Q9ZV94.1|FDL11_ARATH RecName:
           Full=Putative F-box/FBD/LRR-repeat protein At1g78760
           gi|3834318|gb|AAC83034.1| Similar to gi|2244754 heat
           shock transcription factor HSF30 homolog from
           Arabidopsis thaliana chromosome 4 contig gb|Z97335
           [Arabidopsis thaliana] gi|332198026|gb|AEE36147.1|
           putative F-box/FBD/LRR-repeat protein [Arabidopsis
           thaliana]
          Length = 452

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 14/255 (5%)
 Frame = +3

Query: 45  WIYFAIKHNVRVME-LSFPWE----LFPDSVFMCHTLTELRLEYVEIHLPRTVSFPCLKI 209
           WI   +   ++V++ L + W       P SV+ C +L  L+L  V +  P+ +S P +K+
Sbjct: 109 WINIVVDQKLKVLDVLDYTWGNEEVQIPPSVYTCESLVSLKLCNVILPNPKVISLPLVKV 168

Query: 210 LKLTENVLYGEKLTENLFSSCLMLEELIIRSCSWHDFSII-ISSPPNLKVLELREKEDGN 386
           ++L         + E + SSC  LE LII   S  D +++ +SS   L    +    DG 
Sbjct: 169 IELDIVKFSNALVLEKIISSCSALESLIISRSSVDDINVLRVSSRSLLSFKHIGNCSDGW 228

Query: 387 VASRIRICSPNLEELKYFGPTLPRIDEVIYSTLV------TLDFESCERPCFEPDYS-VA 545
               + I +P LE L     +  +       +LV        + E    P   P    + 
Sbjct: 229 DELEVAIDAPKLEYLNISDHSTAKFKMKNSGSLVEAKINIIFNMEELPHPNDRPKRKMIQ 288

Query: 546 GLLMGLRNVAKLSLDSYCFEVLGQDPNLEACLPTSCCSLRHLRLVLRPFKDY-VKVLILL 722
             L  + +V KL + S+  EV+  D   E  L       R+L  +   F+D+ +K+L   
Sbjct: 289 DFLAEISSVKKLFISSHTLEVI-HDLGCELPL------FRNLSSLHIDFEDHTLKMLSTF 341

Query: 723 LRSYPNLETLHISFK 767
           L+S PN+++L + FK
Sbjct: 342 LQSCPNVKSLVVEFK 356


>ref|NP_200450.1| putative FBD-associated F-box protein [Arabidopsis thaliana]
           gi|75262702|sp|Q9FM92.1|FBD22_ARATH RecName:
           Full=Putative FBD-associated F-box protein At5g56390
           gi|10177838|dbj|BAB11267.1| unnamed protein product
           [Arabidopsis thaliana] gi|332009376|gb|AED96759.1|
           putative FBD-associated F-box protein [Arabidopsis
           thaliana]
          Length = 428

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 68/219 (31%), Positives = 102/219 (46%), Gaps = 12/219 (5%)
 Frame = +3

Query: 138 LTELRLEYVE-IHLPRTVSFPCLKILKLTENVLYGEKLTENLFSSCLMLEELIIRSCSWH 314
           L +L+L+ V  + +   VSFP LK L+L      G +   NL SSC +LE+L+++ CS  
Sbjct: 135 LADLKLQNVVLVDVSTPVSFPSLKRLRLKSVKYPGNEFVNNLISSCPVLEDLVVKQCSDD 194

Query: 315 DFSIIISSPPNLKVLEL--REKEDGNVASRIRICSPNLEELKYFGPTLPRIDEVIYSTLV 488
           + +I+    P+LK L L  R + + +V     I +P+LE LK    T      V+ ST+ 
Sbjct: 195 NVTILTVRVPSLKRLSLIQRAELEIDVPHDFVIDTPSLEHLKIVDYTYG--SRVVKSTMN 252

Query: 489 TLDFESCERPCFEPDYSVAGLLMGLRNVAKLSLDSYCFEVLGQDPNLEACLPTS------ 650
            +   S +   F P      +L  L +  +L L                CLPTS      
Sbjct: 253 RIITASMD--VFSP--QTKEILGSLTSTKRLFL----------------CLPTSKDAYPV 292

Query: 651 ---CCSLRHLRLVLRPFKDYVKVLILLLRSYPNLETLHI 758
                SL HL +      +++ VLI +LR  PNL+TL I
Sbjct: 293 GNIFGSLIHLTICTCE-TEWLNVLIRVLRDSPNLKTLKI 330


>ref|NP_190721.3| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|75276325|sp|Q501E9.1|FDL20_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At3g51530
           gi|63003802|gb|AAY25430.1| At3g51530 [Arabidopsis
           thaliana] gi|110739329|dbj|BAF01577.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|115646881|gb|ABJ17151.1| At3g51530 [Arabidopsis
           thaliana] gi|332645282|gb|AEE78803.1|
           F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
          Length = 455

 Score = 62.8 bits (151), Expect = 8e-08
 Identities = 49/139 (35%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
 Frame = +3

Query: 45  WIYFAIKHNVR--VMELSF---PWELFPDSVFMCHTLTELRLEYVEIHLPRTVSFPCLKI 209
           W   A   +VR  V++LS    P   FP S+F   TL  L+L+YV I++P  VS   L+ 
Sbjct: 118 WATIAFTRHVREFVLDLSSYHGPRVRFPTSLFCFDTLETLKLDYVYIYVPCPVSMKSLRT 177

Query: 210 LKLTENVLYGEKLTENLFSSCLMLEELIIRSCSWHDFSI-IISSPPNLKVLELREKEDGN 386
           L L   V  G++   NLF+SC  LE L++R   + D  +  I   P+LK L L +     
Sbjct: 178 LHLLSVVYKGDESGHNLFASCPNLEHLVLRRGFFFDAVVNFIIDAPSLKTLLLSDPFSAR 237

Query: 387 VASRIRICSPNLEELKYFG 443
            +SR  +       LKY G
Sbjct: 238 ESSRGYVI--KAPSLKYLG 254


>ref|XP_002877808.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323646|gb|EFH54067.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 446

 Score = 62.8 bits (151), Expect = 8e-08
 Identities = 51/140 (36%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
 Frame = +3

Query: 45  WIYFAIKHNVR--VMELSFPWEL---FPDSVFMCHTLTELRL-EYVEIHLPRTVSFPCLK 206
           W   A   +VR  V++LSF   L   FP S+F   TL  L+L  YV +  P  VS   L+
Sbjct: 105 WATIAFARHVREFVLDLSFCHGLQIRFPSSLFCFDTLETLKLMNYVYLDFPSLVSMKSLR 164

Query: 207 ILKLTENVLYGEKLTENLFSSCLMLEELIIRSCSWHDF-SIIISSPPNLKVLELREKEDG 383
            L L   V  G++   NLFSSC  LE L++R    HD+        P+LK L L +    
Sbjct: 165 TLHLLSLVYKGDESVHNLFSSCPNLEHLVLRRGFSHDYVKNFTIEAPSLKTLSLSDSFRA 224

Query: 384 NVASRIRICSPNLEELKYFG 443
             +S   I +P+   LKY G
Sbjct: 225 RESSGYVIKAPS---LKYLG 241