BLASTX nr result

ID: Coptis21_contig00005664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005664
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36394.3| unnamed protein product [Vitis vinifera]              171   9e-41
ref|XP_002268671.2| PREDICTED: putative disease resistance prote...   170   1e-40
ref|XP_002268589.2| PREDICTED: putative disease resistance prote...   169   3e-40
ref|XP_003632840.1| PREDICTED: putative disease resistance prote...   167   1e-39
ref|XP_002269044.2| PREDICTED: putative disease resistance prote...   166   2e-39

>emb|CBI36394.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score =  171 bits (432), Expect = 9e-41
 Identities = 97/196 (49%), Positives = 131/196 (66%), Gaps = 16/196 (8%)
 Frame = +2

Query: 2   AIFPKDHNMEKDQLVKLWMAQGYLSGTDGARELERVGVEYFHALAMRSFFQDFGKDDNGN 181
           A+FPKD  +E+D+L+KLWMAQ YL  +DG +E+E VG  YF  LA RSFFQDF K D+GN
Sbjct: 114 AVFPKDSVIERDELIKLWMAQSYLK-SDGRKEMEMVGRTYFEYLAARSFFQDFEKYDDGN 172

Query: 182 IVRCKMHDLVHDFVEFLTKTDCSVL-VNNEKISS-----HKIRHLTVDDVEN----PSIY 331
           I+RCKMHD+VHDF +FLT+ +C ++ V+N+++ S      KIRH T+   E+     S Y
Sbjct: 173 IIRCKMHDIVHDFAQFLTQNECFIVEVDNQQMESIDLSFKKIRHTTLVVRESTPNFTSTY 232

Query: 332 EAKKLRTLLV-----GKTSRSVPSALHQLTCLRTLDLSREFFDPGLEVLPSEVSRLLHLR 496
             K L TLL       +  +++P+ L  LTCL+ LDLS       +E LP EV +L+HLR
Sbjct: 233 NMKNLHTLLAKEAFNSRVFKALPNLLRHLTCLKALDLSSNQL---IEELPREVGKLIHLR 289

Query: 497 YLDLSYS-SMKELPET 541
           YL+LS   S++ELPET
Sbjct: 290 YLNLSLCLSLRELPET 305


>ref|XP_002268671.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 923

 Score =  170 bits (431), Expect = 1e-40
 Identities = 100/192 (52%), Positives = 127/192 (66%), Gaps = 12/192 (6%)
 Frame = +2

Query: 2   AIFPKDHNMEKDQLVKLWMAQGYLSGTDGARELERVGVEYFHALAMRSFFQDFGKDDNGN 181
           A+FPKD  +E+D+L+KLWMAQ YL  +DG++E+E VG  YF  LA RSFFQDF KDD+GN
Sbjct: 433 AVFPKDSVIERDELIKLWMAQSYLK-SDGSKEMEMVGRTYFEYLAARSFFQDFEKDDDGN 491

Query: 182 IVRCKMHDLVHDFVEFLTKTDCSVL-VNNEKISS-----HKIRHLTVDDVEN----PSIY 331
           I+ CKMHD+VHDF +FLT  +C ++ V+N+K  S      KIRH T+   E+     S  
Sbjct: 492 IIHCKMHDIVHDFAQFLTLNECFIVEVDNQKKGSMDLFFQKIRHATLVVRESTPNFASTC 551

Query: 332 EAKKLRTLLVGKTSRS-VPSALHQLTCLRTLDLSREFFDPGLEVLPSEVSRLLHLRYLDL 508
             K L TLL  +   S V  AL  LTCLR LDL        +E LP EV +L+HLRYL+L
Sbjct: 552 NMKNLHTLLAKRAFDSRVLEALGHLTCLRALDLRSNQL---IEELPKEVGKLIHLRYLNL 608

Query: 509 SY-SSMKELPET 541
           SY  S++ELPET
Sbjct: 609 SYCDSLRELPET 620


>ref|XP_002268589.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 922

 Score =  169 bits (428), Expect = 3e-40
 Identities = 101/192 (52%), Positives = 127/192 (66%), Gaps = 12/192 (6%)
 Frame = +2

Query: 2   AIFPKDHNMEKDQLVKLWMAQGYLSGTDGARELERVGVEYFHALAMRSFFQDFGKDDNGN 181
           A+FPKD  + + +L+KLWMAQ YL  +DG +E+E VG  YF  LA RSFFQDF KDD+GN
Sbjct: 432 AVFPKDSVIVRAELIKLWMAQSYLK-SDGCKEMEMVGRTYFEYLAARSFFQDFEKDDDGN 490

Query: 182 IVRCKMHDLVHDFVEFLTKTDCSVL-VNNEKISS-----HKIRHLTVDDVEN----PSIY 331
           I+RCKMHD+VHDF +FLT+ +C ++ V+N+K  S      KIRH T+   E+     S  
Sbjct: 491 IIRCKMHDIVHDFAQFLTQNECFIVEVDNQKKGSMDLFFQKIRHATLVVRESTPNFASTC 550

Query: 332 EAKKLRTLLVGKTSRS-VPSALHQLTCLRTLDLSREFFDPGLEVLPSEVSRLLHLRYLDL 508
             K L TLL  K   S V  AL  LTCLR LDLSR      +E LP EV +L+HLRYL+L
Sbjct: 551 NMKNLHTLLAKKAFDSRVLEALGNLTCLRALDLSRNRL---IEELPKEVGKLIHLRYLNL 607

Query: 509 SYS-SMKELPET 541
           S   S++ELPET
Sbjct: 608 SLCYSLRELPET 619


>ref|XP_003632840.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 903

 Score =  167 bits (422), Expect = 1e-39
 Identities = 95/196 (48%), Positives = 131/196 (66%), Gaps = 16/196 (8%)
 Frame = +2

Query: 2   AIFPKDHNMEKDQLVKLWMAQGYLSGTDGARELERVGVEYFHALAMRSFFQDFGKDDNGN 181
           A+FPK   +E+D+L+KLWMAQ YL  +DG++E+E +G  YF  LA RSFFQDF KD +GN
Sbjct: 410 AVFPKASVIERDELIKLWMAQSYLK-SDGSKEMEMIGRTYFEYLAARSFFQDFEKDTDGN 468

Query: 182 IVRCKMHDLVHDFVEFLTKTDCSVL-VNNEKISS-----HKIRHLTVDDVENP----SIY 331
           I+RCKMHD+VHDF +FLT+ +C ++ V+N+++ S      KIRH+T+   E+     S Y
Sbjct: 469 IIRCKMHDIVHDFAQFLTQNECFIVEVDNQQMESIDLSFKKIRHITLVVRESTPNFVSTY 528

Query: 332 EAKKLRTLLVGKTSRS-----VPSALHQLTCLRTLDLSREFFDPGLEVLPSEVSRLLHLR 496
             K L TLL  +  +S     +P+ L  LTCLR LDLS       +E LP EV +L+HLR
Sbjct: 529 NMKNLHTLLAKEAFKSSVLVALPNLLRHLTCLRALDLSSNQL---IEELPKEVGKLIHLR 585

Query: 497 YLDLSYSS-MKELPET 541
           +L+LS    ++ELPET
Sbjct: 586 FLNLSGCFWLRELPET 601


>ref|XP_002269044.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 919

 Score =  166 bits (420), Expect = 2e-39
 Identities = 100/192 (52%), Positives = 128/192 (66%), Gaps = 12/192 (6%)
 Frame = +2

Query: 2   AIFPKDHNMEKDQLVKLWMAQGYLSGTDGARELERVGVEYFHALAMRSFFQDFGKDDNGN 181
           A+FPKD  +E+D+L+KLWMAQ YL  +DG++E+E VG EYF  LA RSFFQDF KD + +
Sbjct: 432 AVFPKDSVIERDELIKLWMAQSYLK-SDGSKEMEMVGREYFEYLAARSFFQDFEKDGDDD 490

Query: 182 IVRCKMHDLVHDFVEFLTKTDCSVL-VNNEKISS-----HKIRHLTVDDVEN----PSIY 331
           I+RCKMHD+VHDF +FLT+ +C V+ V+N+K  S      KI H T+   E+     S  
Sbjct: 491 IIRCKMHDIVHDFAQFLTQNECFVVEVDNQKKGSMDLFFQKICHATLVVQESTLNFASTC 550

Query: 332 EAKKLRTLLVGKTSRS-VPSALHQLTCLRTLDLSREFFDPGLEVLPSEVSRLLHLRYLDL 508
             K L TLL      S V  AL  LTCLR LDLS   ++  +E LP EV +L+HLRYLDL
Sbjct: 551 NMKNLHTLLAKSAFDSRVLEALGHLTCLRALDLS---WNQLIEELPKEVGKLIHLRYLDL 607

Query: 509 S-YSSMKELPET 541
           S   S++ELPET
Sbjct: 608 SRCQSLRELPET 619


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