BLASTX nr result

ID: Coptis21_contig00005637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005637
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317351.1| multidrug resistance protein ABC transporter...    77   4e-12
ref|XP_002526609.1| mgatp-energized glutathione s-conjugate pump...    73   6e-11
ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2...    73   7e-11
ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2...    73   7e-11
ref|XP_003546076.1| PREDICTED: ABC transporter C family member 2...    71   3e-10

>ref|XP_002317351.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222860416|gb|EEE97963.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1617

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 39/44 (88%), Positives = 40/44 (90%)
 Frame = +3

Query: 621 LSAS*VAAVFRKSLRLTHEGRNKFASGKITNLMTTDAEAFQQIC 752
           L A+ VAAVFRKSLRLTHEGR KFASGKITNLMTTDAEA QQIC
Sbjct: 365 LRATLVAAVFRKSLRLTHEGRRKFASGKITNLMTTDAEALQQIC 408


>ref|XP_002526609.1| mgatp-energized glutathione s-conjugate pump, putative [Ricinus
           communis] gi|223534049|gb|EEF35768.1| mgatp-energized
           glutathione s-conjugate pump, putative [Ricinus
           communis]
          Length = 1569

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 36/44 (81%), Positives = 39/44 (88%)
 Frame = +3

Query: 621 LSAS*VAAVFRKSLRLTHEGRNKFASGKITNLMTTDAEAFQQIC 752
           L ++ +AAVFRKSLRLTHE R KFASGKITNLMTTDAEA QQIC
Sbjct: 315 LRSTLIAAVFRKSLRLTHESRQKFASGKITNLMTTDAEALQQIC 358


>ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2 isoform 2 [Vitis
           vinifera]
          Length = 1616

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 35/39 (89%), Positives = 37/39 (94%)
 Frame = +3

Query: 636 VAAVFRKSLRLTHEGRNKFASGKITNLMTTDAEAFQQIC 752
           VAAVFRKSL+LTHEGR +FASGKITNLMTTDAEA QQIC
Sbjct: 370 VAAVFRKSLKLTHEGRRQFASGKITNLMTTDAEALQQIC 408


>ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2 isoform 1 [Vitis
           vinifera] gi|297740795|emb|CBI30977.3| unnamed protein
           product [Vitis vinifera]
          Length = 1623

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 35/39 (89%), Positives = 37/39 (94%)
 Frame = +3

Query: 636 VAAVFRKSLRLTHEGRNKFASGKITNLMTTDAEAFQQIC 752
           VAAVFRKSL+LTHEGR +FASGKITNLMTTDAEA QQIC
Sbjct: 377 VAAVFRKSLKLTHEGRRQFASGKITNLMTTDAEALQQIC 415


>ref|XP_003546076.1| PREDICTED: ABC transporter C family member 2-like [Glycine max]
          Length = 1620

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = +3

Query: 621 LSAS*VAAVFRKSLRLTHEGRNKFASGKITNLMTTDAEAFQQIC 752
           L ++ VAAVFRKSLRLTHE R +FA+GKITNLMTTDAEA QQIC
Sbjct: 372 LRSTLVAAVFRKSLRLTHEARKQFATGKITNLMTTDAEALQQIC 415


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