BLASTX nr result

ID: Coptis21_contig00005621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005621
         (1357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531713.1| ubiquitin conjugating enzyme, putative [Rici...   403   e-110
ref|XP_002317497.1| predicted protein [Populus trichocarpa] gi|2...   400   e-109
ref|XP_002274123.2| PREDICTED: probable ubiquitin-conjugating en...   399   e-109
emb|CBI21855.3| unnamed protein product [Vitis vinifera]              396   e-108
ref|XP_003539595.1| PREDICTED: probable ubiquitin-conjugating en...   390   e-106

>ref|XP_002531713.1| ubiquitin conjugating enzyme, putative [Ricinus communis]
            gi|223528656|gb|EEF30672.1| ubiquitin conjugating enzyme,
            putative [Ricinus communis]
          Length = 647

 Score =  403 bits (1036), Expect = e-110
 Identities = 186/285 (65%), Positives = 224/285 (78%)
 Frame = -3

Query: 1271 DKDEVLKKYGLYKQFDTVGDFSDHHYASQGSKTKQPPRNWAKAIQQEWKILEKDLPDTIF 1092
            ++D++L KY  +K+FDTV D SDHHYAS+GS  KQPP+NWAK IQ+EW+ILE DLPD IF
Sbjct: 351  NEDDILSKYQNFKRFDTVEDHSDHHYASKGSSVKQPPKNWAKKIQEEWRILENDLPDGIF 410

Query: 1091 VRVYEERMDLLRAVIVGAAGTPYHDGLFFFDFCFTSGYPNVPPQVYYHSGGLRLNPNLYN 912
            VR+YE RMDLLRAVI+GA GTPYHDGLFFFD  F SGYPN+PP VYYHSGGLRLNPNLYN
Sbjct: 411  VRIYESRMDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPNIPPNVYYHSGGLRLNPNLYN 470

Query: 911  CGKVCLSLLNTWQGSKEEKWIPRKSTVLQVLLSIQALVLNAKPFYNEPGHASMYGGKQGE 732
            CGKVCLSLL TW G+K EKW+P  STVLQVL+SIQAL+LN KP++NEPG+A M G   GE
Sbjct: 471  CGKVCLSLLGTWHGNKNEKWLPGVSTVLQVLVSIQALILNQKPYFNEPGYAHMNGSAHGE 530

Query: 731  KMAKDYSENTYILSCRTMLYTLRRPPKHFEEYVAGHFRQHAHAILVACKAYMDGAQVGCL 552
              ++ Y+E T+ILS +TM+YT+RRPPKHFE++V GHF +HAH ILVACKAYMDGAQVGCL
Sbjct: 531  IQSQQYNERTFILSLKTMVYTMRRPPKHFEDFVLGHFHKHAHDILVACKAYMDGAQVGCL 590

Query: 551  XXXXXXXXXXXXESCSQNFKTQVSSIVHSLVHAFISNGSKDCKQF 417
                        +SCS++FK  +   V  L+  F   G KD +++
Sbjct: 591  VKGGVQDVDEGDKSCSKSFKDSLPGCVDLLLKEFSLIGVKDTEKY 635


>ref|XP_002317497.1| predicted protein [Populus trichocarpa] gi|222860562|gb|EEE98109.1|
            predicted protein [Populus trichocarpa]
          Length = 480

 Score =  400 bits (1028), Expect = e-109
 Identities = 189/292 (64%), Positives = 229/292 (78%)
 Frame = -3

Query: 1271 DKDEVLKKYGLYKQFDTVGDFSDHHYASQGSKTKQPPRNWAKAIQQEWKILEKDLPDTIF 1092
            +KD++L+K+ L+K+FDTV D SDHHY S+GS  KQPP+ WAK IQ+EW+ILE DLPD+IF
Sbjct: 185  NKDDILRKFQLFKRFDTVEDHSDHHYTSKGSLMKQPPKTWAKRIQEEWRILENDLPDSIF 244

Query: 1091 VRVYEERMDLLRAVIVGAAGTPYHDGLFFFDFCFTSGYPNVPPQVYYHSGGLRLNPNLYN 912
            VRVYE RMDLLRAVI+GA GTPYHDGLFFFD  F +GYP VPP VYYHSGGLRLNPNLYN
Sbjct: 245  VRVYETRMDLLRAVIIGAEGTPYHDGLFFFDVFFPAGYPKVPPLVYYHSGGLRLNPNLYN 304

Query: 911  CGKVCLSLLNTWQGSKEEKWIPRKSTVLQVLLSIQALVLNAKPFYNEPGHASMYGGKQGE 732
            CGKVCLSLL TWQG+K EKW P  STVLQVL+SIQAL+LN KPF+NEPG+  + G   GE
Sbjct: 305  CGKVCLSLLGTWQGNKNEKWQPGVSTVLQVLVSIQALILNQKPFFNEPGYELLSGSANGE 364

Query: 731  KMAKDYSENTYILSCRTMLYTLRRPPKHFEEYVAGHFRQHAHAILVACKAYMDGAQVGCL 552
            K +++YSE+T+ LS +TM+YT+RRPPKHFE++V GHF +HA+ ILVACKAYMDGAQVGCL
Sbjct: 365  KRSQEYSESTFFLSLKTMVYTMRRPPKHFEDFVLGHFNKHANDILVACKAYMDGAQVGCL 424

Query: 551  XXXXXXXXXXXXESCSQNFKTQVSSIVHSLVHAFISNGSKDCKQFLPQTSNS 396
                        +SCS++FK  + + V  LV  F   G +D + F  QTS +
Sbjct: 425  VKGGVQDVDEGDKSCSKSFKDSLPAYVDMLVKQFSQIGVQDTENF--QTSEN 474


>ref|XP_002274123.2| PREDICTED: probable ubiquitin-conjugating enzyme E2 26-like [Vitis
            vinifera]
          Length = 511

 Score =  399 bits (1025), Expect = e-109
 Identities = 186/285 (65%), Positives = 224/285 (78%)
 Frame = -3

Query: 1271 DKDEVLKKYGLYKQFDTVGDFSDHHYASQGSKTKQPPRNWAKAIQQEWKILEKDLPDTIF 1092
            ++D+VL KY  +KQFDTV DFSDHH++  G   +QPP+NWAK IQ+EWKILE+DLP+TIF
Sbjct: 223  NQDDVLGKYLFFKQFDTVEDFSDHHFSRMGFVGEQPPKNWAKKIQEEWKILERDLPETIF 282

Query: 1091 VRVYEERMDLLRAVIVGAAGTPYHDGLFFFDFCFTSGYPNVPPQVYYHSGGLRLNPNLYN 912
            VRVYE RMDLLRAVIVG AGTPYHDGLF FD  F   YP+VPP VYY+SGGLRLNPNLY+
Sbjct: 283  VRVYEARMDLLRAVIVGPAGTPYHDGLFVFDVLFPPNYPSVPPMVYYYSGGLRLNPNLYD 342

Query: 911  CGKVCLSLLNTWQGSKEEKWIPRKSTVLQVLLSIQALVLNAKPFYNEPGHASMYGGKQGE 732
            CGKVCLSLLNTW G K E WIP KST+LQVL+SIQ L+LNAKPF+NEPG+ +MY G+ GE
Sbjct: 343  CGKVCLSLLNTWNGKKTEMWIPGKSTMLQVLVSIQGLILNAKPFFNEPGYENMYVGEDGE 402

Query: 731  KMAKDYSENTYILSCRTMLYTLRRPPKHFEEYVAGHFRQHAHAILVACKAYMDGAQVGCL 552
            + +K Y+E+ +ILS +TM+YT+RRPPKHFE++V GHFRQ AH ILVACKAY +G+QVG +
Sbjct: 403  RRSKQYNEDVFILSLKTMVYTIRRPPKHFEDFVVGHFRQRAHDILVACKAYKEGSQVGSM 462

Query: 551  XXXXXXXXXXXXESCSQNFKTQVSSIVHSLVHAFISNGSKDCKQF 417
                         S S  FK  V  ++ +LV  FI NGSKDC+QF
Sbjct: 463  VKEGTQDVNEHEMSTSHEFKEAVGKMMKTLVTNFIKNGSKDCEQF 507


>emb|CBI21855.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  396 bits (1018), Expect = e-108
 Identities = 185/283 (65%), Positives = 222/283 (78%)
 Frame = -3

Query: 1265 DEVLKKYGLYKQFDTVGDFSDHHYASQGSKTKQPPRNWAKAIQQEWKILEKDLPDTIFVR 1086
            ++VL KY  +KQFDTV DFSDHH++  G   +QPP+NWAK IQ+EWKILE+DLP+TIFVR
Sbjct: 186  NDVLGKYLFFKQFDTVEDFSDHHFSRMGFVGEQPPKNWAKKIQEEWKILERDLPETIFVR 245

Query: 1085 VYEERMDLLRAVIVGAAGTPYHDGLFFFDFCFTSGYPNVPPQVYYHSGGLRLNPNLYNCG 906
            VYE RMDLLRAVIVG AGTPYHDGLF FD  F   YP+VPP VYY+SGGLRLNPNLY+CG
Sbjct: 246  VYEARMDLLRAVIVGPAGTPYHDGLFVFDVLFPPNYPSVPPMVYYYSGGLRLNPNLYDCG 305

Query: 905  KVCLSLLNTWQGSKEEKWIPRKSTVLQVLLSIQALVLNAKPFYNEPGHASMYGGKQGEKM 726
            KVCLSLLNTW G K E WIP KST+LQVL+SIQ L+LNAKPF+NEPG+ +MY G+ GE+ 
Sbjct: 306  KVCLSLLNTWNGKKTEMWIPGKSTMLQVLVSIQGLILNAKPFFNEPGYENMYVGEDGERR 365

Query: 725  AKDYSENTYILSCRTMLYTLRRPPKHFEEYVAGHFRQHAHAILVACKAYMDGAQVGCLXX 546
            +K Y+E+ +ILS +TM+YT+RRPPKHFE++V GHFRQ AH ILVACKAY +G+QVG +  
Sbjct: 366  SKQYNEDVFILSLKTMVYTIRRPPKHFEDFVVGHFRQRAHDILVACKAYKEGSQVGSMVK 425

Query: 545  XXXXXXXXXXESCSQNFKTQVSSIVHSLVHAFISNGSKDCKQF 417
                       S S  FK  V  ++ +LV  FI NGSKDC+QF
Sbjct: 426  EGTQDVNEHEMSTSHEFKEAVGKMMKTLVTNFIKNGSKDCEQF 468


>ref|XP_003539595.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 25-like [Glycine
            max]
          Length = 695

 Score =  390 bits (1001), Expect = e-106
 Identities = 182/289 (62%), Positives = 221/289 (76%)
 Frame = -3

Query: 1277 EEDKDEVLKKYGLYKQFDTVGDFSDHHYASQGSKTKQPPRNWAKAIQQEWKILEKDLPDT 1098
            +E K+E+L+K+  +KQFDTV D SDHH+    S   QPP+NWAK IQ+EW+ILEKDLP +
Sbjct: 391  DEAKEEILRKFRSFKQFDTVEDISDHHFFRSNSSMHQPPKNWAKKIQEEWRILEKDLPAS 450

Query: 1097 IFVRVYEERMDLLRAVIVGAAGTPYHDGLFFFDFCFTSGYPNVPPQVYYHSGGLRLNPNL 918
            IFVRV+E RMDLLRAVI+GA GTPYHDGLFFFD  F S YPNVPP+V+YHSGGLRLNPNL
Sbjct: 451  IFVRVFESRMDLLRAVIIGAEGTPYHDGLFFFDVFFPSAYPNVPPKVHYHSGGLRLNPNL 510

Query: 917  YNCGKVCLSLLNTWQGSKEEKWIPRKSTVLQVLLSIQALVLNAKPFYNEPGHASMYGGKQ 738
            Y CGKVCLSLLNTW GSK EKW+P  ST+LQVL+SIQ L+LN KP++NEPG+A M G   
Sbjct: 511  YACGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILNTKPYFNEPGYAHMSGSAN 570

Query: 737  GEKMAKDYSENTYILSCRTMLYTLRRPPKHFEEYVAGHFRQHAHAILVACKAYMDGAQVG 558
            GEKM+  Y+E+T+ILS RTM+Y +R+PPK+FE++V GHF   A  ILVACKAYM+GAQVG
Sbjct: 571  GEKMSFQYNEDTFILSLRTMMYMIRKPPKNFEDFVKGHFCSRASDILVACKAYMEGAQVG 630

Query: 557  CLXXXXXXXXXXXXESCSQNFKTQVSSIVHSLVHAFISNGSKDCKQFLP 411
            CL             SCSQ FK  +S  ++ LV  F   G+KD ++ LP
Sbjct: 631  CLVKGGVQDVDEGDRSCSQRFKDSLSGYMNMLVKEFAKVGAKDIEKLLP 679


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