BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005618
         (2176 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543076.1| PREDICTED: katanin p80 WD40 repeat-containin...   260   9e-67
ref|XP_002264711.2| PREDICTED: katanin p80 WD40 repeat-containin...   252   3e-64
ref|XP_003541552.1| PREDICTED: katanin p80 WD40 repeat-containin...   251   4e-64
ref|XP_003528432.1| PREDICTED: katanin p80 WD40 repeat-containin...   251   7e-64
emb|CBI35743.3| unnamed protein product [Vitis vinifera]              246   2e-62

>ref|XP_003543076.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
            1-like [Glycine max]
          Length = 824

 Score =  260 bits (665), Expect = 9e-67
 Identities = 160/435 (36%), Positives = 229/435 (52%), Gaps = 67/435 (15%)
 Frame = +2

Query: 611  KSISQVTNRQFTVPLIVPRSNTYAEGTVKSRTEAKAAEATSAGVVFKQSHRRRASVSKYE 790
            KS  Q   + F  P IVPR     + + KS  E      T  G++ + +H RRAS  +++
Sbjct: 402  KSNEQAIRKSFIAPNIVPRDTPDGKVSAKSEKETITFSKTKPGMLLRPAHVRRASTGRFD 461

Query: 791  TEKLTAEARC-----------------FSNKLGGSDISSRSRESTETVDENHNSGSVVEK 919
             ++ + +                    F   LG  +      E  E+ ++ H   SV +K
Sbjct: 462  VDRFSEDVNSGTFCDTAIKLDSTKEPKFQPNLGSQN------EVKESCEDKHPIKSVTDK 515

Query: 920  LDRVLSPLAPLKSIHENSAHSQCCSSGTRSSKKVNGVKL--GRTRSLVERWEGREKC--- 1084
             D+ LSP     S       S  C       K VNGV +  GRTRSLVER+E R+K    
Sbjct: 516  FDKTLSPSR--FSEQTKCDESSLCKEEISPVKYVNGVAVVRGRTRSLVERFERRDKIQIN 573

Query: 1085 ---------------------------------------------SNAEPLSNTASANIL 1129
                                                         +N  PL  T S    
Sbjct: 574  EDQTTVFLPTINETREKVHNEDQIKASPTPVVFERRERIPFNEDRNNLPPLPKTIS---- 629

Query: 1130 PESHTLPQMSKEQPQTSGRELASADDEIVVEDIMQSHDMFLGSLHSRLAKLQVVRYFWQR 1309
             E+   P   K +PQ    +  SA++E ++E +MQ+HD  L +L SRL KLQVVR+FW+R
Sbjct: 630  -ETDKSPNTVKVEPQIYKEDSNSANEEKIIEGLMQTHDATLSNLRSRLTKLQVVRHFWER 688

Query: 1310 NDVKGGLNAVGKLPDHFVQADVVSVLKEKMDTVSLELFSYLLPIVLGLLNSQIDRHTIFS 1489
            ND+KG  NA+ KLPDH VQADV+SVL E+M+  +L+LFS LLP++ GLL+S+I+RH   S
Sbjct: 689  NDIKGATNALRKLPDHSVQADVISVLVERMEIFTLDLFSCLLPVLTGLLDSKIERHVKVS 748

Query: 1490 LEMLLKLVAIYGSVIQSTMSASSSIGVDLQAERRRDCCTECFIQLQKIKQVIPSIIRRGG 1669
            L+MLLK+VA++G  + +T+SA  S+GVDL  E RR+CC +CF++LQKI+  +P +IR+GG
Sbjct: 749  LDMLLKVVAVFGPTVLATVSAPPSVGVDLHQEERRECCNKCFMELQKIQMTLPILIRKGG 808

Query: 1670 LLAKYSQELNLLLQE 1714
            +LA+ + ELNL+LQ+
Sbjct: 809  ILARSALELNLVLQQ 823


>ref|XP_002264711.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog 1
            [Vitis vinifera]
          Length = 220

 Score =  252 bits (644), Expect = 3e-64
 Identities = 123/216 (56%), Positives = 170/216 (78%)
 Frame = +2

Query: 1067 EGREKCSNAEPLSNTASANILPESHTLPQMSKEQPQTSGRELASADDEIVVEDIMQSHDM 1246
            E +E+ ++ E  +   S+ ++PE+     M K QPQ SGRE  +A +E  +ED++Q+HD+
Sbjct: 4    ERQERFNSNEDQTTKVSSEMMPETARTSPMLKGQPQISGRESTAASEENTIEDVIQNHDL 63

Query: 1247 FLGSLHSRLAKLQVVRYFWQRNDVKGGLNAVGKLPDHFVQADVVSVLKEKMDTVSLELFS 1426
            F+ +L SRL KLQVVR+FW++NDVKG +NA+ KLPDH VQADVVSVL EKM+ ++L+LFS
Sbjct: 64   FISTLRSRLTKLQVVRHFWEQNDVKGAINALRKLPDHSVQADVVSVLMEKMEILTLDLFS 123

Query: 1427 YLLPIVLGLLNSQIDRHTIFSLEMLLKLVAIYGSVIQSTMSASSSIGVDLQAERRRDCCT 1606
             LLP+++ LL+S ++RH   SL+MLLKLV+++G VI S +SA  +IGV+LQAE RR+CC 
Sbjct: 124  CLLPVLMSLLDSNLERHANLSLDMLLKLVSVFGPVIHSAISAPPAIGVNLQAEHRRECCN 183

Query: 1607 ECFIQLQKIKQVIPSIIRRGGLLAKYSQELNLLLQE 1714
            +CFIQLQKI++ +P IIRRGGLLAK +QELNL+LQE
Sbjct: 184  QCFIQLQKIQKNLPVIIRRGGLLAKSAQELNLVLQE 219


>ref|XP_003541552.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
            1-like [Glycine max]
          Length = 814

 Score =  251 bits (642), Expect = 4e-64
 Identities = 159/428 (37%), Positives = 240/428 (56%), Gaps = 59/428 (13%)
 Frame = +2

Query: 608  AKSISQVTNRQFTVPLIVPRSNTYAEGTVKSRTEAKAAEATSAGVVFKQSHRRRASVSKY 787
            AK   Q   + + +P  VPR        V  +  A  ++ T  G++ K  H + AS    
Sbjct: 397  AKQNEQTLRKSYIMPNFVPRD------IVNGKNSATFSK-TKPGMLLKPVHVQGASTDIL 449

Query: 788  ETEKLTAE--ARCFSNKLGGSDISS---------RSRESTETVDENHNSGSVVEKLDRVL 934
            + +  +++  +R F +    SD               E  E++++ H   SV EK ++ L
Sbjct: 450  DVDGFSSDLDSRTFCDTGSKSDSPKDPNFQMKLGSQNEVRESIEDKHPIKSVTEKFEKTL 509

Query: 935  SP--LAPLKSIHENSAHSQCCSSGTRSSKKVNGVKL--GRTRSLVERWEGREKC------ 1084
            +P   +     +++S +S+  S      K VNGV +  GRTRSLVER+E RE+       
Sbjct: 510  TPDRFSDQDKCNQSSPYSKEMSP----VKYVNGVAVLQGRTRSLVERFERRERTPTDENQ 565

Query: 1085 --------------------SNAEPLSNTASA------------------NILPESHTLP 1150
                                +NA P+++  S                   N   E+    
Sbjct: 566  ANATPTTIFENKEKILKEDQTNASPITSITSEKGERFPFGDDQNNMPNVPNTTSETDKSA 625

Query: 1151 QMSKEQPQTSGRELASADDEIVVEDIMQSHDMFLGSLHSRLAKLQVVRYFWQRNDVKGGL 1330
               K +PQ  G +  SA+D  ++E +MQ+HD+ L +L SRL KLQVV++FW+RND KG +
Sbjct: 626  NFLKVEPQVLGSDSNSANDGEIIEGLMQTHDVTLSNLRSRLTKLQVVQHFWERNDTKGAI 685

Query: 1331 NAVGKLPDHFVQADVVSVLKEKMDTVSLELFSYLLPIVLGLLNSQIDRHTIFSLEMLLKL 1510
            +A+ KLPD  VQADV+SVL +KM+ ++L+LFS LLP++ GLL+S I+RH   SL+MLLKL
Sbjct: 686  SALRKLPDQSVQADVISVLVDKMEIITLDLFSCLLPVLTGLLDSNIERHVKVSLDMLLKL 745

Query: 1511 VAIYGSVIQSTMSASSSIGVDLQAERRRDCCTECFIQLQKIKQVIPSIIRRGGLLAKYSQ 1690
            VA++G  I+ST+SA  S+G+DL AE+RR+C  +CF+QLQKI+ ++P +IRRGG+LAK +Q
Sbjct: 746  VAVFGPTIRSTISAPPSVGIDLHAEQRRECSNQCFMQLQKIRMILPILIRRGGILAKSAQ 805

Query: 1691 ELNLLLQE 1714
            ELNL+LQ+
Sbjct: 806  ELNLVLQQ 813


>ref|XP_003528432.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
            1-like [Glycine max]
          Length = 712

 Score =  251 bits (640), Expect = 7e-64
 Identities = 151/349 (43%), Positives = 210/349 (60%), Gaps = 45/349 (12%)
 Frame = +2

Query: 803  TAEARCFSNKLGGSDISSRSRESTETVDENHNSGSVVEKLDRVLSPLAPLKSIHENSAHS 982
            +A+   F  KLG  +      E  E+V++ H   SV EKL++ L+P     S  E    S
Sbjct: 371  SAKNPTFQMKLGSQN------EVRESVEDKHPIKSVTEKLEKTLTP--DRFSDQEKCNQS 422

Query: 983  QCCSSGTRSSKKVNGVKL--GRTRSLVERWEGREKC------------------------ 1084
               S      K VNGV +  GRTRSLVER+E RE+                         
Sbjct: 423  SPYSKEMSPVKYVNGVAVLQGRTRSLVERFERRERTPINEDQANATPTTIFENKEKKFKD 482

Query: 1085 -SNAEPLSNTAS------------------ANILPESHTLPQMSKEQPQTSGRELASADD 1207
             +NA P++   S                  +N   E+ T     K +PQ  GR+  SA+D
Sbjct: 483  QTNASPITTPTSEKGERILVNEDQNNTSAISNTTSETDTSANFLKVEPQVFGRDSNSAND 542

Query: 1208 EIVVEDIMQSHDMFLGSLHSRLAKLQVVRYFWQRNDVKGGLNAVGKLPDHFVQADVVSVL 1387
              ++E +MQ+HD+ L +L SRL KLQVVR+FW++ND K  ++A+ KLPD  VQADV+SVL
Sbjct: 543  GEIIEGLMQTHDVTLSNLRSRLTKLQVVRHFWEQNDTKSAISALRKLPDLSVQADVISVL 602

Query: 1388 KEKMDTVSLELFSYLLPIVLGLLNSQIDRHTIFSLEMLLKLVAIYGSVIQSTMSASSSIG 1567
             EKM+ ++L+LFS LLP++ GLL+S I+RH   SL+MLLKLVA++G  ++ST+SA  S+G
Sbjct: 603  VEKMEILTLDLFSCLLPVLTGLLDSNIERHVKVSLDMLLKLVAVFGPTVRSTISAPPSVG 662

Query: 1568 VDLQAERRRDCCTECFIQLQKIKQVIPSIIRRGGLLAKYSQELNLLLQE 1714
            VDL AE+RR+C  +CF+QLQKI+ ++P +IRRGGLLAK +QELNL+LQ+
Sbjct: 663  VDLHAEQRRECSNQCFMQLQKIRLILPILIRRGGLLAKSAQELNLVLQQ 711


>emb|CBI35743.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score =  246 bits (628), Expect = 2e-62
 Identities = 140/320 (43%), Positives = 202/320 (63%), Gaps = 13/320 (4%)
 Frame = +2

Query: 794  EKLTAEARCFSNKL--GGSDISSRSRESTETVDENHNSGSVVEKLDRVLSPLAPLKSIHE 967
            E L    R  S K+  G + ++ R+R   E  +      S  ++   V S + P +    
Sbjct: 2    ESLNDNKRINSIKIVNGVAVVAGRTRSLVERFERREKFNSNEDQTTNVSSDMMPERQERF 61

Query: 968  NSAHSQCCSSGTRSSKKVNGVKLGRTRSLVERWEGREKCSNAEPLSNTASANI--LPESH 1141
            NS   Q        + KV+   +  T       +G+ + S  E  + +    I  + ++H
Sbjct: 62   NSNEDQ--------TTKVSSEMMPETARTSPMLKGQPQISGRESTAASEENTIEDVIQNH 113

Query: 1142 TL---------PQMSKEQPQTSGRELASADDEIVVEDIMQSHDMFLGSLHSRLAKLQVVR 1294
             L          ++ K QPQ SGRE  +A +E  ++D++Q+HD+F+ +L SRL KLQVVR
Sbjct: 114  DLFISTLRSRLTKLQKGQPQISGRESTAASEENTIKDVIQNHDLFISTLRSRLTKLQVVR 173

Query: 1295 YFWQRNDVKGGLNAVGKLPDHFVQADVVSVLKEKMDTVSLELFSYLLPIVLGLLNSQIDR 1474
            +FW++NDVKG +NA+ KLPDH VQADVVSVL EKM+ ++L+LFS LLP+++ LL+S ++R
Sbjct: 174  HFWEQNDVKGAINALRKLPDHSVQADVVSVLMEKMEILTLDLFSCLLPVLMSLLDSNLER 233

Query: 1475 HTIFSLEMLLKLVAIYGSVIQSTMSASSSIGVDLQAERRRDCCTECFIQLQKIKQVIPSI 1654
            H   SL+MLLKLV+++G VI S +SA  +IGV+LQAE RR+CC +CFIQLQKI++ +P I
Sbjct: 234  HANLSLDMLLKLVSVFGPVIHSAISAPPAIGVNLQAEHRRECCNQCFIQLQKIQKNLPVI 293

Query: 1655 IRRGGLLAKYSQELNLLLQE 1714
            IRRGGLLAK +QELNL+LQE
Sbjct: 294  IRRGGLLAKSAQELNLVLQE 313