BLASTX nr result

ID: Coptis21_contig00005607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005607
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39513.3| unnamed protein product [Vitis vinifera]              182   1e-43
tpg|DAA53991.1| TPA: hypothetical protein ZEAMMB73_426325 [Zea m...   181   3e-43
tpg|DAA53989.1| TPA: hypothetical protein ZEAMMB73_426325, parti...   181   3e-43
ref|XP_003566534.1| PREDICTED: probable U6 snRNA-associated Sm-l...   181   3e-43
dbj|BAJ92310.1| predicted protein [Hordeum vulgare subsp. vulgar...   181   3e-43

>emb|CBI39513.3| unnamed protein product [Vitis vinifera]
          Length = 162

 Score =  182 bits (461), Expect = 1e-43
 Identities = 84/86 (97%), Positives = 85/86 (98%)
 Frame = -1

Query: 909 EENMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP 730
           E+ MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP
Sbjct: 11  EKKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP 70

Query: 729 ECYIRGNTIKYLRVPDEVIDKVQEET 652
           ECYIRGNTIKYLRVPDEVIDKVQEET
Sbjct: 71  ECYIRGNTIKYLRVPDEVIDKVQEET 96


>tpg|DAA53991.1| TPA: hypothetical protein ZEAMMB73_426325 [Zea mays]
          Length = 172

 Score =  181 bits (458), Expect = 3e-43
 Identities = 83/85 (97%), Positives = 85/85 (100%)
 Frame = -1

Query: 900 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 721
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60

Query: 720 IRGNTIKYLRVPDEVIDKVQEETNK 646
           IRGNTIKYLRVPDEVIDKVQEET+K
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETSK 85


>tpg|DAA53989.1| TPA: hypothetical protein ZEAMMB73_426325, partial [Zea mays]
          Length = 112

 Score =  181 bits (458), Expect = 3e-43
 Identities = 83/85 (97%), Positives = 85/85 (100%)
 Frame = -1

Query: 900 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 721
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60

Query: 720 IRGNTIKYLRVPDEVIDKVQEETNK 646
           IRGNTIKYLRVPDEVIDKVQEET+K
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETSK 85


>ref|XP_003566534.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Brachypodium distachyon] gi|326528247|dbj|BAJ93305.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 142

 Score =  181 bits (458), Expect = 3e-43
 Identities = 83/85 (97%), Positives = 85/85 (100%)
 Frame = -1

Query: 900 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 721
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60

Query: 720 IRGNTIKYLRVPDEVIDKVQEETNK 646
           IRGNTIKYLRVPDEVIDKVQEET+K
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETSK 85


>dbj|BAJ92310.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326521472|dbj|BAK00312.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 143

 Score =  181 bits (458), Expect = 3e-43
 Identities = 83/85 (97%), Positives = 85/85 (100%)
 Frame = -1

Query: 900 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 721
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60

Query: 720 IRGNTIKYLRVPDEVIDKVQEETNK 646
           IRGNTIKYLRVPDEVIDKVQEET+K
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETSK 85


Top