BLASTX nr result

ID: Coptis21_contig00005605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005605
         (1878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155594.1| PREDICTED: mediator-associated protein 1-lik...   126   2e-26
ref|XP_003541767.1| PREDICTED: uncharacterized protein LOC100807...   121   7e-25
ref|XP_003547113.1| PREDICTED: uncharacterized protein LOC100791...   119   3e-24
ref|XP_002518574.1| transcription regulator, putative [Ricinus c...   101   8e-19
ref|XP_002300270.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-17

>ref|XP_004155594.1| PREDICTED: mediator-associated protein 1-like [Cucumis sativus]
          Length = 414

 Score =  126 bits (317), Expect = 2e-26
 Identities = 86/240 (35%), Positives = 125/240 (52%), Gaps = 2/240 (0%)
 Frame = +3

Query: 825  DDGKRLFQRVWSDEDEY-VIXXXXXXXXXXXXDPSAPSNSTALFEYIKDSLSIKDVYKSQ 1001
            D+ K+LFQR+WS++DE  ++            DPS   N  A  ++IK SL + DV K+Q
Sbjct: 176  DESKKLFQRLWSEDDEIAILNGMIDYSAKKGSDPSLDMN--AFHDFIKKSLHV-DVTKAQ 232

Query: 1002 LISKIRTLKRKFLNTAKRSKNGEDPEISKPHDLKVYQYAKKVWGDEVEGKSVMTDVAKKS 1181
            L+ KIR LK+K+ N A R K G DP  SK HD K ++ +K++WG E   ++   D  K +
Sbjct: 233  LMDKIRRLKKKYRNNADRGKKGADPTFSKAHDQKGFELSKRIWGGEGFLRTPAVDQLKPN 292

Query: 1182 KN-TKTVNNGGECTPNPKPPKAFTLPSSSPVVVAQNVEGNGNAEYPYLNESVQLRNYSIV 1358
             N T   N  G  +      KA  LPS         ++ + + E P       +     +
Sbjct: 293  ANGTPKKNQRGSTSKALASLKAELLPSPDAPKEDDKMKVD-DCEVPSGCMDGFVAFERSL 351

Query: 1359 PMQGLGEVFGKRGWDAIGSSNAKDLNKRWKGLLAAEAKLYLDRVDLVRDQTKMMMDALDS 1538
               GL E F K G + IG S   +L + WK L  AE +L+L R +L+RDQTK+++DA  S
Sbjct: 352  GAVGLPESFLKPGLELIGQSKRTELEEEWKKLHLAELELFLKRTELIRDQTKLILDAYKS 411


>ref|XP_003541767.1| PREDICTED: uncharacterized protein LOC100807745 [Glycine max]
          Length = 448

 Score =  121 bits (303), Expect = 7e-25
 Identities = 81/253 (32%), Positives = 127/253 (50%), Gaps = 16/253 (6%)
 Frame = +3

Query: 828  DGKRLFQRVWSDEDEY-VIXXXXXXXXXXXXDPSAPSNSTALFEYIKDSLSIKDVYKSQL 1004
            D  + FQR+WS+EDE  ++            DP    N+ A  +++K SL + +V  +QL
Sbjct: 196  DNSKKFQRLWSEEDELAIVKGVVEFTSKTGLDPLKFPNTNAFHDFVKKSLHV-EVSCNQL 254

Query: 1005 ISKIRTLKRKFLNTAKRSKNGEDPEISKPHDLKVYQYAKKVWGDEVEGKSVMTDVAKKSK 1184
              K+R LK+KF   A + KNGE P+ SKPHD K ++ +KKVWG EV   +    V K   
Sbjct: 255  KEKVRRLKKKFETQAGKGKNGEAPKFSKPHDQKFFELSKKVWGREVTAGANGGPVEKPKS 314

Query: 1185 NTKTV------NNGGECTPNPKPPKAFTLPSSSPVVVAQ---------NVEGNGNAEYPY 1319
            N   V       +G     + K PK  + P   PV+  +         N + +G     +
Sbjct: 315  NGSAVKSPKKKESGSRNVASAKKPKPESKPEPVPVLSLEYKDSEKMQINQKPDGGDASLF 374

Query: 1320 LNESVQLRNYSIVPMQGLGEVFGKRGWDAIGSSNAKDLNKRWKGLLAAEAKLYLDRVDLV 1499
            L E  + +  + +    L E   KRG + IG S   +L  +WK L  AE +L+ +R +L+
Sbjct: 375  LRELARSKEGASICK--LDEDDVKRGLELIGESKRAELRGKWKKLHLAEMELFANRSELI 432

Query: 1500 RDQTKMMMDALDS 1538
             +QTK++++AL +
Sbjct: 433  GEQTKLILEALQA 445


>ref|XP_003547113.1| PREDICTED: uncharacterized protein LOC100791520 [Glycine max]
          Length = 437

 Score =  119 bits (298), Expect = 3e-24
 Identities = 83/254 (32%), Positives = 125/254 (49%), Gaps = 17/254 (6%)
 Frame = +3

Query: 828  DGKRLFQRVWSDEDEY-VIXXXXXXXXXXXXDPSAPSNSTALFEYIKDSLSIKDVYKSQL 1004
            D  + FQR+WS+EDE  ++            DP    N+ A  +++K SL + +   +QL
Sbjct: 184  DNSKKFQRLWSEEDELAILKGVVEFTSKTGLDPLKFPNANAFHDFMKKSLHV-EFSSNQL 242

Query: 1005 ISKIRTLKRKFLNTAKRSKNGEDPEISKPHDLKVYQYAKKVWGDEVEG-------KSVMT 1163
              K+R LK+KF   A + KNG+ P+ SKPHD K ++ +KK WG E  G       K    
Sbjct: 243  KEKLRRLKKKFETQAGKGKNGDAPKFSKPHDQKFFELSKKAWGSEDGGVANGSVEKPKSN 302

Query: 1164 DVAKKSKNTKTVNNGGECTPNPKPPKAFTLPSSSPVVVAQNVEG---------NGNAEYP 1316
              A KS N K   +G     + K PK  T P  +PV   +  E          +G     
Sbjct: 303  GNAAKSPNPKKKESGSRNVASAKKPKPETNPEPAPVPSLEFKESERMEIDQKPDGGDACL 362

Query: 1317 YLNESVQLRNYSIVPMQGLGEVFGKRGWDAIGSSNAKDLNKRWKGLLAAEAKLYLDRVDL 1496
            +L E V+ +  + V    L E   KRG + I  S   +L  +WK L  AE +L+ +R +L
Sbjct: 363  FLRELVRYKEGANV--SRLDEDDVKRGLELIEESKRAELRGKWKKLHHAEMELFANRSEL 420

Query: 1497 VRDQTKMMMDALDS 1538
            + +QTK++++AL S
Sbjct: 421  IGEQTKLILEALRS 434


>ref|XP_002518574.1| transcription regulator, putative [Ricinus communis]
            gi|223542419|gb|EEF43961.1| transcription regulator,
            putative [Ricinus communis]
          Length = 391

 Score =  101 bits (251), Expect = 8e-19
 Identities = 73/235 (31%), Positives = 113/235 (48%), Gaps = 2/235 (0%)
 Frame = +3

Query: 825  DDGKRLFQRVWSDEDEYVIXXXXXXXXXXXX-DPSAPSNSTALFEYIKDSLSIKDVYKSQ 1001
            D  K+LFQR+WS++DE V+             DP+   +  + F+YIK SL   DV  +Q
Sbjct: 162  DTKKQLFQRLWSEDDEIVVLKGIIDFIEKKGVDPA--KDIISFFDYIKKSLHF-DVSLNQ 218

Query: 1002 LISKIRTLKRKFLNTAKRSKNGEDPEISKPHDLKVYQYAKKVWG-DEVEGKSVMTDVAKK 1178
            L  KI  LK+KF N  K  K GED   SK HD K +  +KK+WG D + G S  + +   
Sbjct: 219  LKDKIWRLKKKFENNVK-GKKGEDKTFSKSHDQKSFDLSKKIWGTDGIIGASD-SSIKPN 276

Query: 1179 SKNTKTVNNGGECTPNPKPPKAFTLPSSSPVVVAQNVEGNGNAEYPYLNESVQLRNYSIV 1358
             K  K  NN  +     K      +   +  V   +VE   ++     +  V +      
Sbjct: 277  GKAKKATNNNAKSLVALKAELGMDVDKENEKVDKMDVELENHSSLKQFDRGVGV------ 330

Query: 1359 PMQGLGEVFGKRGWDAIGSSNAKDLNKRWKGLLAAEAKLYLDRVDLVRDQTKMMM 1523
               G+ +   KRG D +  +   ++ ++W+ L  AE +L+L R +L R+Q K+M+
Sbjct: 331  --SGMEDYVIKRGLDMVQGAKKAEMEEKWRKLHVAELELFLRRNELTREQAKLML 383


>ref|XP_002300270.1| predicted protein [Populus trichocarpa] gi|222847528|gb|EEE85075.1|
            predicted protein [Populus trichocarpa]
          Length = 380

 Score = 95.5 bits (236), Expect = 4e-17
 Identities = 76/239 (31%), Positives = 120/239 (50%), Gaps = 4/239 (1%)
 Frame = +3

Query: 825  DDGKRLFQRVWSDEDEY-VIXXXXXXXXXXXXDPSAPSNSTALFEYIKDSLSIKDVYKSQ 1001
            D  K+LFQR+W+++DE  ++            DPS   N  A +++IK SL   DV  +Q
Sbjct: 152  DSKKQLFQRLWTEDDEIALLRGIIDFTAKKGYDPSKDMN--AFYDFIKKSLHF-DVSMTQ 208

Query: 1002 LISKIRTLKRKFLNTAKRSKNGEDPEISKPHDLKVYQYAKKVWGDEVEGKSVMTDVAKKS 1181
            L  KI  LK+KF N  K  K GE+   SKPHD K +  +K +WG +   K    D  +K+
Sbjct: 209  LKDKISRLKKKFENHVK-GKKGENKTFSKPHDQKGFDLSKSIWGSDGSIK----DNGRKN 263

Query: 1182 KNTKTVNNGGECTPNPKPPKAFTLPSSSPVVVAQNVE---GNGNAEYPYLNESVQLRNYS 1352
             +  T NN    T N K P+A        V     VE     G++      +SV L+  S
Sbjct: 264  DSGNTSNNNK--TGNAKKPEASKPELGMDVGEEDRVEVEMARGSSV-----KSV-LKFDS 315

Query: 1353 IVPMQGLGEVFGKRGWDAIGSSNAKDLNKRWKGLLAAEAKLYLDRVDLVRDQTKMMMDA 1529
             V ++ + +   + G + +  +  + + + W+ L  AE +L+L R +L+R+Q K+M+ A
Sbjct: 316  NVSVERMEDYVVRMGLNFVHGTEKEKMEEEWRKLHVAELELFLKRNELIREQAKLMLTA 374


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