BLASTX nr result

ID: Coptis21_contig00005603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005603
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68296.1| hypothetical protein VITISV_033562 [Vitis vinifera]    70   5e-10
emb|CBI37827.3| unnamed protein product [Vitis vinifera]               69   1e-09
ref|XP_002280561.1| PREDICTED: uncharacterized protein LOC100245...    69   1e-09
ref|XP_003553977.1| PREDICTED: uncharacterized protein LOC100815...    69   2e-09
ref|XP_003543436.1| PREDICTED: uncharacterized protein LOC100790...    69   2e-09

>emb|CAN68296.1| hypothetical protein VITISV_033562 [Vitis vinifera]
          Length = 519

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 45/117 (38%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
 Frame = +3

Query: 123 GVSANNLGLIHVTTTPNLPFSPQP---LRLSDSNNLSFTSRNIISTSVRYSAQ----FKC 281
           G   N  GLIH    P LPF  Q    +     N +    R +    + Y  +     KC
Sbjct: 368 GTRGNGRGLIH----PELPFRDQRCNGIGFKGCNAVGIACRKVPRGRIXYFHEERLGSKC 423

Query: 282 SASLGRNQPESRFNDKSQLEPLWVTYSKQAIQGLKLLVVFLIEQPGQLKYIEWPSFQ 452
            A  GRN+ E  F + S  EP  ++  K+A   LK L  FL++QP QLKYIEWPSFQ
Sbjct: 424 VAYAGRNRHELSFANDSPKEPFLLSSIKEAFWALKSLFEFLVDQPSQLKYIEWPSFQ 480


>emb|CBI37827.3| unnamed protein product [Vitis vinifera]
          Length = 156

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 44/110 (40%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
 Frame = +3

Query: 144 GLIHVTTTPNLPFSPQP---LRLSDSNNLSFTSRNIISTSVRYSAQ----FKCSASLGRN 302
           GLIH    P LPF  Q    +     N +    R +    +RY  +     KC A  GRN
Sbjct: 12  GLIH----PELPFRDQRCNGIGFKGCNAVGIACRKVPRGRIRYFHEERLGSKCVAYAGRN 67

Query: 303 QPESRFNDKSQLEPLWVTYSKQAIQGLKLLVVFLIEQPGQLKYIEWPSFQ 452
           + E  F + S  EP  ++  K+A   LK L  FL++QP QLKYIEWPSFQ
Sbjct: 68  RHELSFANDSPKEPFLLSSIKEAFWALKSLFEFLVDQPSQLKYIEWPSFQ 117


>ref|XP_002280561.1| PREDICTED: uncharacterized protein LOC100245308 [Vitis vinifera]
          Length = 157

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 44/110 (40%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
 Frame = +3

Query: 144 GLIHVTTTPNLPFSPQP---LRLSDSNNLSFTSRNIISTSVRYSAQ----FKCSASLGRN 302
           GLIH    P LPF  Q    +     N +    R +    +RY  +     KC A  GRN
Sbjct: 13  GLIH----PELPFRDQRCNGIGFKGCNAVGIACRKVPRGRIRYFHEERLGSKCVAYAGRN 68

Query: 303 QPESRFNDKSQLEPLWVTYSKQAIQGLKLLVVFLIEQPGQLKYIEWPSFQ 452
           + E  F + S  EP  ++  K+A   LK L  FL++QP QLKYIEWPSFQ
Sbjct: 69  RHELSFANDSPKEPFLLSSIKEAFWALKSLFEFLVDQPSQLKYIEWPSFQ 118


>ref|XP_003553977.1| PREDICTED: uncharacterized protein LOC100815558 [Glycine max]
          Length = 156

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 42/99 (42%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
 Frame = +3

Query: 165 TPNLPFSPQPLRLSDSNNLSFTSRNIISTSVRYS-AQFKCS---ASLGRNQPESRFNDKS 332
           TP LP S  P R+    N+S TS+ I    +R   A + C+    S  RN     ++D  
Sbjct: 19  TPFLP-SKFPARVDCHRNVSQTSQTIFRIKIREKHANYSCTKFVTSAARNDHHLSYDDDL 77

Query: 333 QLEPLWVTYSKQAIQGLKLLVVFLIEQPGQLKYIEWPSF 449
             EP  +T  K AI GL+ + VFL EQP Q KYIEWPSF
Sbjct: 78  PQEPFLLTLIKDAIWGLRYIFVFLAEQPSQFKYIEWPSF 116


>ref|XP_003543436.1| PREDICTED: uncharacterized protein LOC100790097 [Glycine max]
          Length = 156

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
 Frame = +3

Query: 165 TPNLPFSPQPLRLSDSNNLSFTSRNIISTSVRYS-AQFKCS---ASLGRNQPESRFNDKS 332
           TP LP S  P R+    ++S TS+ I    +R   A   C+    S  RN     ++D  
Sbjct: 19  TPFLP-SKFPARVDYHRDVSLTSQTIFRIKIREKHANHSCTKFVTSAARNDHHLSYDDDL 77

Query: 333 QLEPLWVTYSKQAIQGLKLLVVFLIEQPGQLKYIEWPSF 449
             EP  +T  K  I GL+ + VFL+EQPGQ KYIEWPSF
Sbjct: 78  PQEPFLLTLIKDVIWGLRYIFVFLVEQPGQFKYIEWPSF 116


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