BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005558
         (2136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containi...   797   0.0  
emb|CBI37948.3| unnamed protein product [Vitis vinifera]              797   0.0  
ref|XP_002534048.1| pentatricopeptide repeat-containing protein,...   782   0.0  
ref|XP_002306163.1| predicted protein [Populus trichocarpa] gi|2...   773   0.0  
ref|XP_003533478.1| PREDICTED: pentatricopeptide repeat-containi...   744   0.0  

>ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Vitis vinifera]
          Length = 1115

 Score =  797 bits (2058), Expect = 0.0
 Identities = 393/540 (72%), Positives = 459/540 (85%), Gaps = 1/540 (0%)
 Frame = +1

Query: 1    QVAKAFGAYGILRSK*NVKPDRVVFNALITACGQSGAVDRAFDVLAEMKAEPTPVDPDHV 180
            QVAKAFGAYGI+RSK  V+PDRVVFNALITACGQSGAVDRAFDVLAEM+AE  P+DPDH+
Sbjct: 577  QVAKAFGAYGIMRSK-KVEPDRVVFNALITACGQSGAVDRAFDVLAEMRAETQPIDPDHI 635

Query: 181  TVGALIKTCTQAGQFDRVHEVYKMIHQYNIKGTPEVYTIAIRSCSQLGDLEFALGVYRDM 360
            TVGALIK CT AGQ DR  EVYKMI QYNIKGTPEVYTIA+ S SQ+GD EFA  VY DM
Sbjct: 636  TVGALIKACTNAGQVDRAREVYKMIDQYNIKGTPEVYTIAVSSHSQIGDWEFAYSVYTDM 695

Query: 361  TRNGVIPDEMFLSALVDVAGHAGKVDVAFEVLQEARTRGIKLGNITYSSLMGACSNAKNW 540
            TR GV+PDEMFLSAL+DVAGHAGK+D AFEV+QEAR +GI LG ++YSSLMGACSNAKNW
Sbjct: 696  TRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQEARIQGIPLGIVSYSSLMGACSNAKNW 755

Query: 541  QKALELYEDIKSFKLTPTVSTLNALVTALCDGDQLQKAVEVLDEMKKGSVSPNIITYSIL 720
            QKALELY DIKS KL PTVST+NAL+TALC+G+QL+KA+EVL +MK+  + PN ITYSIL
Sbjct: 756  QKALELYVDIKSMKLNPTVSTMNALITALCEGEQLEKAMEVLSDMKRAGLCPNTITYSIL 815

Query: 721  IVASEKKDEVEVGLMLYSQAKNEGVVPNLIICKCLIGMCLRRFEKAYSLGDPVFSLKSGN 900
            +VASEKKD+++VGLM+ SQA+ + V PNL++C+CL+GMCLRRFEKA +LG+PV S  SG 
Sbjct: 816  LVASEKKDDIDVGLMILSQARKDSVAPNLVMCRCLVGMCLRRFEKACALGEPVLSFNSGR 875

Query: 901  PQVDNKWTSLALTVYRETIASGVLPTMEVFSSLLGCLQFPCDTSSRTRLVENLGVSSDAS 1080
            PQ+DNKWTS AL VYRET+++GV+PTME+ S +LGCLQFP D S R RL+ENLGVS+DAS
Sbjct: 876  PQIDNKWTSSALMVYRETVSAGVIPTMELLSQVLGCLQFPRDVSLRNRLIENLGVSADAS 935

Query: 1081 VCSNLCSLIEGFGEYDPRSFSLLEEATSLGILPCVSFKACPIIVDARKLQIHTVEVYLLT 1260
              SNLCSLI+GFGEYD R+FSLLEEA SLG++ CVSFK  P+IVD R+LQI   EVYLLT
Sbjct: 936  RRSNLCSLIDGFGEYDSRAFSLLEEAASLGVVSCVSFKKSPVIVDTRRLQIRIAEVYLLT 995

Query: 1261 ILKGLKHRLAAGARLPNINIVLPVEKTQVLTPKGEKTIKLVGRVGQSIGALLRRLGLPYQ 1440
            +LKGLKHRLAAGA+LP++ I+LP E TQVL PKGEK I L GR+ Q++ ++LRRLGLPYQ
Sbjct: 996  VLKGLKHRLAAGAKLPSMTILLPTETTQVLAPKGEKAINLAGRISQAVASMLRRLGLPYQ 1055

Query: 1441 GNESYGKIRINGISVKRWFQPKLASPQSGKPPEF-NSELRLGKGISGQQRDIRMRNLYLD 1617
            GNES GKIRING++ +RWFQPKLA P SGK  E  +S+ RLG GIS QQR IR  NL LD
Sbjct: 1056 GNESRGKIRINGLATRRWFQPKLAGPFSGKVDELSSSQSRLGTGISLQQRKIRTGNLSLD 1115



 Score =  106 bits (264), Expect = 3e-20
 Identities = 86/330 (26%), Positives = 146/330 (44%), Gaps = 15/330 (4%)
 Frame = +1

Query: 58   PDRVVFNALITACGQSGAVDRAFDVLAEMKAEPTPVDPDHVTVGALIKTCTQAGQFDRVH 237
            P    FN L++ C  S     AF VL  ++      D    T   LI TC ++G+ D + 
Sbjct: 490  PTLSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTT--LISTCAKSGKVDAMF 547

Query: 238  EVYKMIHQYNIKGTPEVYTIAIRSCSQLGDLEFALGVYRDMTRNGVIPDEMFLSALVDVA 417
            EV+  +    ++     Y   I  C + G +  A G Y  M    V PD +  +AL+   
Sbjct: 548  EVFHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITAC 607

Query: 418  GHAGKVDVAFEVLQE--ARTRGIKLGNITYSSLMGACSNAKNWQKALELYEDIKSFKLTP 591
            G +G VD AF+VL E  A T+ I   +IT  +L+ AC+NA    +A E+Y+ I  + +  
Sbjct: 608  GQSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKG 667

Query: 592  TVSTLNALVTALCDGDQLQKAVEVLDEMKKGSVSPNIITYSILIVASEKKDEVEVGLMLY 771
            T       V++       + A  V  +M +  V P+ +  S LI  +    +++    + 
Sbjct: 668  TPEVYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVI 727

Query: 772  SQAKNEGVVPNLIICKCLIGMC--LRRFEKAYSLGDPVFSLKSGNPQV-----------D 912
             +A+ +G+   ++    L+G C   + ++KA  L   + S+K  NP V           +
Sbjct: 728  QEARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKL-NPTVSTMNALITALCE 786

Query: 913  NKWTSLALTVYRETIASGVLPTMEVFSSLL 1002
             +    A+ V  +   +G+ P    +S LL
Sbjct: 787  GEQLEKAMEVLSDMKRAGLCPNTITYSILL 816


>emb|CBI37948.3| unnamed protein product [Vitis vinifera]
          Length = 1550

 Score =  797 bits (2058), Expect = 0.0
 Identities = 393/540 (72%), Positives = 459/540 (85%), Gaps = 1/540 (0%)
 Frame = +1

Query: 1    QVAKAFGAYGILRSK*NVKPDRVVFNALITACGQSGAVDRAFDVLAEMKAEPTPVDPDHV 180
            QVAKAFGAYGI+RSK  V+PDRVVFNALITACGQSGAVDRAFDVLAEM+AE  P+DPDH+
Sbjct: 1012 QVAKAFGAYGIMRSK-KVEPDRVVFNALITACGQSGAVDRAFDVLAEMRAETQPIDPDHI 1070

Query: 181  TVGALIKTCTQAGQFDRVHEVYKMIHQYNIKGTPEVYTIAIRSCSQLGDLEFALGVYRDM 360
            TVGALIK CT AGQ DR  EVYKMI QYNIKGTPEVYTIA+ S SQ+GD EFA  VY DM
Sbjct: 1071 TVGALIKACTNAGQVDRAREVYKMIDQYNIKGTPEVYTIAVSSHSQIGDWEFAYSVYTDM 1130

Query: 361  TRNGVIPDEMFLSALVDVAGHAGKVDVAFEVLQEARTRGIKLGNITYSSLMGACSNAKNW 540
            TR GV+PDEMFLSAL+DVAGHAGK+D AFEV+QEAR +GI LG ++YSSLMGACSNAKNW
Sbjct: 1131 TRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQEARIQGIPLGIVSYSSLMGACSNAKNW 1190

Query: 541  QKALELYEDIKSFKLTPTVSTLNALVTALCDGDQLQKAVEVLDEMKKGSVSPNIITYSIL 720
            QKALELY DIKS KL PTVST+NAL+TALC+G+QL+KA+EVL +MK+  + PN ITYSIL
Sbjct: 1191 QKALELYVDIKSMKLNPTVSTMNALITALCEGEQLEKAMEVLSDMKRAGLCPNTITYSIL 1250

Query: 721  IVASEKKDEVEVGLMLYSQAKNEGVVPNLIICKCLIGMCLRRFEKAYSLGDPVFSLKSGN 900
            +VASEKKD+++VGLM+ SQA+ + V PNL++C+CL+GMCLRRFEKA +LG+PV S  SG 
Sbjct: 1251 LVASEKKDDIDVGLMILSQARKDSVAPNLVMCRCLVGMCLRRFEKACALGEPVLSFNSGR 1310

Query: 901  PQVDNKWTSLALTVYRETIASGVLPTMEVFSSLLGCLQFPCDTSSRTRLVENLGVSSDAS 1080
            PQ+DNKWTS AL VYRET+++GV+PTME+ S +LGCLQFP D S R RL+ENLGVS+DAS
Sbjct: 1311 PQIDNKWTSSALMVYRETVSAGVIPTMELLSQVLGCLQFPRDVSLRNRLIENLGVSADAS 1370

Query: 1081 VCSNLCSLIEGFGEYDPRSFSLLEEATSLGILPCVSFKACPIIVDARKLQIHTVEVYLLT 1260
              SNLCSLI+GFGEYD R+FSLLEEA SLG++ CVSFK  P+IVD R+LQI   EVYLLT
Sbjct: 1371 RRSNLCSLIDGFGEYDSRAFSLLEEAASLGVVSCVSFKKSPVIVDTRRLQIRIAEVYLLT 1430

Query: 1261 ILKGLKHRLAAGARLPNINIVLPVEKTQVLTPKGEKTIKLVGRVGQSIGALLRRLGLPYQ 1440
            +LKGLKHRLAAGA+LP++ I+LP E TQVL PKGEK I L GR+ Q++ ++LRRLGLPYQ
Sbjct: 1431 VLKGLKHRLAAGAKLPSMTILLPTETTQVLAPKGEKAINLAGRISQAVASMLRRLGLPYQ 1490

Query: 1441 GNESYGKIRINGISVKRWFQPKLASPQSGKPPEF-NSELRLGKGISGQQRDIRMRNLYLD 1617
            GNES GKIRING++ +RWFQPKLA P SGK  E  +S+ RLG GIS QQR IR  NL LD
Sbjct: 1491 GNESRGKIRINGLATRRWFQPKLAGPFSGKVDELSSSQSRLGTGISLQQRKIRTGNLSLD 1550



 Score =  106 bits (264), Expect = 3e-20
 Identities = 86/330 (26%), Positives = 146/330 (44%), Gaps = 15/330 (4%)
 Frame = +1

Query: 58   PDRVVFNALITACGQSGAVDRAFDVLAEMKAEPTPVDPDHVTVGALIKTCTQAGQFDRVH 237
            P    FN L++ C  S     AF VL  ++      D    T   LI TC ++G+ D + 
Sbjct: 925  PTLSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTT--LISTCAKSGKVDAMF 982

Query: 238  EVYKMIHQYNIKGTPEVYTIAIRSCSQLGDLEFALGVYRDMTRNGVIPDEMFLSALVDVA 417
            EV+  +    ++     Y   I  C + G +  A G Y  M    V PD +  +AL+   
Sbjct: 983  EVFHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITAC 1042

Query: 418  GHAGKVDVAFEVLQE--ARTRGIKLGNITYSSLMGACSNAKNWQKALELYEDIKSFKLTP 591
            G +G VD AF+VL E  A T+ I   +IT  +L+ AC+NA    +A E+Y+ I  + +  
Sbjct: 1043 GQSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKG 1102

Query: 592  TVSTLNALVTALCDGDQLQKAVEVLDEMKKGSVSPNIITYSILIVASEKKDEVEVGLMLY 771
            T       V++       + A  V  +M +  V P+ +  S LI  +    +++    + 
Sbjct: 1103 TPEVYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVI 1162

Query: 772  SQAKNEGVVPNLIICKCLIGMC--LRRFEKAYSLGDPVFSLKSGNPQV-----------D 912
             +A+ +G+   ++    L+G C   + ++KA  L   + S+K  NP V           +
Sbjct: 1163 QEARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKL-NPTVSTMNALITALCE 1221

Query: 913  NKWTSLALTVYRETIASGVLPTMEVFSSLL 1002
             +    A+ V  +   +G+ P    +S LL
Sbjct: 1222 GEQLEKAMEVLSDMKRAGLCPNTITYSILL 1251


>ref|XP_002534048.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223525928|gb|EEF28334.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1129

 Score =  782 bits (2019), Expect = 0.0
 Identities = 390/540 (72%), Positives = 450/540 (83%), Gaps = 1/540 (0%)
 Frame = +1

Query: 1    QVAKAFGAYGILRSK*NVKPDRVVFNALITACGQSGAVDRAFDVLAEMKAEPTPVDPDHV 180
            Q+AKAFGAYGILRSK NVKPDRVVFNALITACGQSGAVDRAFDVLAEM AE  P+DPDH+
Sbjct: 591  QMAKAFGAYGILRSK-NVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAETHPIDPDHI 649

Query: 181  TVGALIKTCTQAGQFDRVHEVYKMIHQYNIKGTPEVYTIAIRSCSQLGDLEFALGVYRDM 360
            TVGAL+K C +AGQ DR  EVY M+H+YNIKGTPEVYTIA+  CSQ GD EFA  VY DM
Sbjct: 650  TVGALMKACAKAGQVDRAKEVYNMLHKYNIKGTPEVYTIAVNFCSQTGDWEFARSVYDDM 709

Query: 361  TRNGVIPDEMFLSALVDVAGHAGKVDVAFEVLQEARTRGIKLGNITYSSLMGACSNAKNW 540
            TR GV PDEMFLSALVDVAGHAG VD+AFE LQEART+G +LG + YSSLMGACSNAKNW
Sbjct: 710  TRKGVAPDEMFLSALVDVAGHAGLVDIAFETLQEARTQGTQLGIVPYSSLMGACSNAKNW 769

Query: 541  QKALELYEDIKSFKLTPTVSTLNALVTALCDGDQLQKAVEVLDEMKKGSVSPNIITYSIL 720
            QKALELYEDIK+ KL PTVST+NAL+TALCDGDQLQKA+E L EMK   + PNI+TYSIL
Sbjct: 770  QKALELYEDIKAIKLKPTVSTMNALMTALCDGDQLQKALETLSEMKSFGLCPNIVTYSIL 829

Query: 721  IVASEKKDEVEVGLMLYSQAKNEGVVPNLIICKCLIGMCLRRFEKAYSLGDPVFSLKSGN 900
            +VASE+KD+++ G ML SQAK + + P  ++ KC+IGMCLRR++KA SLG+ + S  SG 
Sbjct: 830  LVASERKDDLDAGDMLLSQAKEDCITPTFLMYKCIIGMCLRRYKKACSLGESILSFDSGR 889

Query: 901  PQVDNKWTSLALTVYRETIASGVLPTMEVFSSLLGCLQFPCDTSSRTRLVENLGVSSDAS 1080
            PQ+ N+WTS ALTVYRETIA+G  PTMEV S +LGCLQ PCD S + RLVENLGV++D S
Sbjct: 890  PQIKNEWTSRALTVYRETIAAGEKPTMEVVSQVLGCLQLPCDASLKGRLVENLGVTADPS 949

Query: 1081 VCSNLCSLIEGFGEYDPRSFSLLEEATSLGILPCVSFKACPIIVDARKLQIHTVEVYLLT 1260
              SNLC+L++GFGEYDPR+FSLLEEA SLG +PC SFK  PI++DA+ LQ H  EVYLLT
Sbjct: 950  KFSNLCALVDGFGEYDPRAFSLLEEAASLGTVPCASFKESPIVMDAKLLQSHIAEVYLLT 1009

Query: 1261 ILKGLKHRLAAGARLPNINIVLPVEKTQVLTPKGEKTIKLVGRVGQSIGALLRRLGLPYQ 1440
            ILKGLKHRLAAGA+LPNI I+LP E TQ+ T KGEKTI L GR+ Q + +LLRRLGLPYQ
Sbjct: 1010 ILKGLKHRLAAGAKLPNITILLPTEMTQIKTLKGEKTINLAGRISQDVASLLRRLGLPYQ 1069

Query: 1441 GNESYGKIRINGISVKRWFQPKLASPQSGKPPEFNSEL-RLGKGISGQQRDIRMRNLYLD 1617
            GNESYGKIRINGIS++RW QPKLASP SGKP E +  L R+GKGI+ QQR+IR  NL L+
Sbjct: 1070 GNESYGKIRINGISLRRWLQPKLASPFSGKPEELSFSLSRIGKGITHQQRNIRTGNLSLN 1129



 Score =  112 bits (279), Expect = 5e-22
 Identities = 86/348 (24%), Positives = 143/348 (41%), Gaps = 2/348 (0%)
 Frame = +1

Query: 58   PDRVVFNALITACGQSGAVDRAFDVLAEMKAEPTPVDPDHVTVGALIKTCTQAGQFDRVH 237
            P    FN L++ C  S   D AF+VL    A+   +  D      LI TC ++G+ D + 
Sbjct: 504  PSLSTFNMLMSVCSSSQDSDGAFEVL--RLAQGAGLKADCKLYTTLISTCAKSGKVDAMF 561

Query: 238  EVYKMIHQYNIKGTPEVYTIAIRSCSQLGDLEFALGVYRDMTRNGVIPDEMFLSALVDVA 417
            EV+  +    ++     Y   I  C++ G +  A G Y  +    V PD +  +AL+   
Sbjct: 562  EVFHEMVNAGVEPNVHTYGSLIDGCAKAGQMAKAFGAYGILRSKNVKPDRVVFNALITAC 621

Query: 418  GHAGKVDVAFEVLQE--ARTRGIKLGNITYSSLMGACSNAKNWQKALELYEDIKSFKLTP 591
            G +G VD AF+VL E  A T  I   +IT  +LM AC+ A    +A E+Y  +  + +  
Sbjct: 622  GQSGAVDRAFDVLAEMGAETHPIDPDHITVGALMKACAKAGQVDRAKEVYNMLHKYNIKG 681

Query: 592  TVSTLNALVTALCDGDQLQKAVEVLDEMKKGSVSPNIITYSILIVASEKKDEVEVGLMLY 771
            T       V         + A  V D+M +  V+P+ +  S L+  +     V++     
Sbjct: 682  TPEVYTIAVNFCSQTGDWEFARSVYDDMTRKGVAPDEMFLSALVDVAGHAGLVDIAFETL 741

Query: 772  SQAKNEGVVPNLIICKCLIGMCLRRFEKAYSLGDPVFSLKSGNPQVDNKWTSLALTVYRE 951
             +A+ +G    ++    L+G C                           W   AL +Y +
Sbjct: 742  QEARTQGTQLGIVPYSSLMGACSNA----------------------KNWQK-ALELYED 778

Query: 952  TIASGVLPTMEVFSSLLGCLQFPCDTSSRTRLVENLGVSSDASVCSNL 1095
              A  + PT+   ++L+  L   CD     + +E L       +C N+
Sbjct: 779  IKAIKLKPTVSTMNALMTAL---CDGDQLQKALETLSEMKSFGLCPNI 823


>ref|XP_002306163.1| predicted protein [Populus trichocarpa] gi|222849127|gb|EEE86674.1|
            predicted protein [Populus trichocarpa]
          Length = 665

 Score =  773 bits (1995), Expect = 0.0
 Identities = 382/540 (70%), Positives = 452/540 (83%), Gaps = 1/540 (0%)
 Frame = +1

Query: 1    QVAKAFGAYGILRSK*NVKPDRVVFNALITACGQSGAVDRAFDVLAEMKAEPTPVDPDHV 180
            QVAKAFGAYGI+RSK NVKPDRVVFNALITACGQSGAVDRAFDVLAEM  E  P+DPDH+
Sbjct: 127  QVAKAFGAYGIMRSK-NVKPDRVVFNALITACGQSGAVDRAFDVLAEMTGEAQPIDPDHI 185

Query: 181  TVGALIKTCTQAGQFDRVHEVYKMIHQYNIKGTPEVYTIAIRSCSQLGDLEFALGVYRDM 360
            TVGALIK CT AGQ DR  EVY M+H+YNIKGTPEVYTIAI SCSQ+GD EFA  V+ DM
Sbjct: 186  TVGALIKACTNAGQVDRAQEVYNMVHKYNIKGTPEVYTIAINSCSQIGDWEFACKVFDDM 245

Query: 361  TRNGVIPDEMFLSALVDVAGHAGKVDVAFEVLQEARTRGIKLGNITYSSLMGACSNAKNW 540
            TR GV+PDEMFLSAL+DVAGHAGK+D AFE++QEA+ +G +LG I YSSLMGAC NAKNW
Sbjct: 246  TRKGVVPDEMFLSALIDVAGHAGKMDAAFEIIQEAKAKGAQLGIIPYSSLMGACCNAKNW 305

Query: 541  QKALELYEDIKSFKLTPTVSTLNALVTALCDGDQLQKAVEVLDEMKKGSVSPNIITYSIL 720
            QK LELYEDIKS K+ PTV+T+NAL+TALCDGDQL KA+EVL EMK   + PN ITYSIL
Sbjct: 306  QKGLELYEDIKSMKIKPTVATMNALITALCDGDQLPKALEVLSEMKAWGLRPNTITYSIL 365

Query: 721  IVASEKKDEVEVGLMLYSQAKNEGVVPNLIICKCLIGMCLRRFEKAYSLGDPVFSLKSGN 900
             VASE+KD++E GLML SQAK + V P LI+ KC+I MCLR+FE A +LG+ V S  SG 
Sbjct: 366  SVASERKDDLEAGLMLLSQAKKDCVAPTLIMSKCIISMCLRKFESACTLGEAVLSFNSGR 425

Query: 901  PQVDNKWTSLALTVYRETIASGVLPTMEVFSSLLGCLQFPCDTSSRTRLVENLGVSSDAS 1080
             Q++NKWTS+AL VYR T+A+G  PT+E+ S +LGCLQ PCD + + RLVENLGV++ +S
Sbjct: 426  AQIENKWTSVALMVYRGTMAAGEKPTIELVSQVLGCLQIPCDATLKNRLVENLGVTAVSS 485

Query: 1081 VCSNLCSLIEGFGEYDPRSFSLLEEATSLGILPCVSFKACPIIVDARKLQIHTVEVYLLT 1260
              SNLCSL++GFGEYDPR+FSLLEEA +LGI+PCVSFK  PI +DA++LQIH  EVY LT
Sbjct: 486  RYSNLCSLVDGFGEYDPRAFSLLEEAAALGIVPCVSFKESPITMDAKQLQIHIAEVYFLT 545

Query: 1261 ILKGLKHRLAAGARLPNINIVLPVEKTQVLTPKGEKTIKLVGRVGQSIGALLRRLGLPYQ 1440
            ILKGLKHRLAAGA+LPN+ I+LPVEK QV+T +GEKTI + GR+ +++ +LLRRLGLPYQ
Sbjct: 546  ILKGLKHRLAAGAKLPNVTILLPVEKAQVITLEGEKTINVAGRISRAVASLLRRLGLPYQ 605

Query: 1441 GNESYGKIRINGISVKRWFQPKLASPQSGKPPEFNSEL-RLGKGISGQQRDIRMRNLYLD 1617
            GNESYGKIRINGIS++RW QPKL SP SGKP E+++ L RLGKGIS QQR+IR  +  L+
Sbjct: 606  GNESYGKIRINGISLRRWLQPKLDSPFSGKPGEWSTSLSRLGKGISFQQRNIRTGDFSLE 665



 Score =  108 bits (270), Expect = 6e-21
 Identities = 88/329 (26%), Positives = 142/329 (43%), Gaps = 15/329 (4%)
 Frame = +1

Query: 58   PDRVVFNALITACGQSGAVDRAFDVLAEMKAEPTPVDPDHVTVGALIKTCTQAGQFDRVH 237
            P    FN L++ C  S     AF+VL   KA     D    T   LI TC ++G+ D + 
Sbjct: 40   PTLSTFNMLMSVCATSQNSAGAFEVLQLAKAVGLKADCKLYTT--LISTCAKSGKVDAMF 97

Query: 238  EVYKMIHQYNIKGTPEVYTIAIRSCSQLGDLEFALGVYRDMTRNGVIPDEMFLSALVDVA 417
            EV+  +    ++     Y   I  C++ G +  A G Y  M    V PD +  +AL+   
Sbjct: 98   EVFHEMVNAGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITAC 157

Query: 418  GHAGKVDVAFEVLQE--ARTRGIKLGNITYSSLMGACSNAKNWQKALELYEDIKSFKLTP 591
            G +G VD AF+VL E     + I   +IT  +L+ AC+NA    +A E+Y  +  + +  
Sbjct: 158  GQSGAVDRAFDVLAEMTGEAQPIDPDHITVGALIKACTNAGQVDRAQEVYNMVHKYNIKG 217

Query: 592  TVSTLNALVTALCDGDQLQKAVEVLDEMKKGSVSPNIITYSILIVASEKKDEVEVGLMLY 771
            T       + +       + A +V D+M +  V P+ +  S LI  +    +++    + 
Sbjct: 218  TPEVYTIAINSCSQIGDWEFACKVFDDMTRKGVVPDEMFLSALIDVAGHAGKMDAAFEII 277

Query: 772  SQAKNEGVVPNLIICKCLIGMC--LRRFEKAYSLGDPVFSLKSGNPQV-----------D 912
             +AK +G    +I    L+G C   + ++K   L + + S+K   P V           D
Sbjct: 278  QEAKAKGAQLGIIPYSSLMGACCNAKNWQKGLELYEDIKSMKI-KPTVATMNALITALCD 336

Query: 913  NKWTSLALTVYRETIASGVLPTMEVFSSL 999
                  AL V  E  A G+ P    +S L
Sbjct: 337  GDQLPKALEVLSEMKAWGLRPNTITYSIL 365



 Score = 82.0 bits (201), Expect = 6e-13
 Identities = 82/376 (21%), Positives = 155/376 (41%), Gaps = 21/376 (5%)
 Frame = +1

Query: 166  DPDHVTVGALIKTCTQAGQFDRVHEVYKMIHQYNIKGTPEVYTIAIRSCSQLGDLEFALG 345
            +P   T   L+  C  +       EV ++     +K   ++YT  I +C++ G ++    
Sbjct: 39   NPTLSTFNMLMSVCATSQNSAGAFEVLQLAKAVGLKADCKLYTTLISTCAKSGKVDAMFE 98

Query: 346  VYRDMTRNGVIPDEMFLSALVDVAGHAGKVDVAFEVLQEARTRGIKLGNITYSSLMGACS 525
            V+ +M   GV P+     AL+D    AG+V  AF      R++ +K   + +++L+ AC 
Sbjct: 99   VFHEMVNAGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 158

Query: 526  NAKNWQKALELYEDI--KSFKLTPTVSTLNALVTALCDGDQLQKAVEVLDEMKKGSVSPN 699
             +    +A ++  ++  ++  + P   T+ AL+ A  +  Q+ +A EV + + K ++   
Sbjct: 159  QSGAVDRAFDVLAEMTGEAQPIDPDHITVGALIKACTNAGQVDRAQEVYNMVHKYNIKGT 218

Query: 700  IITYSILIVASEKKDEVEVGLMLYSQAKNEGVVPNLIICKCLI------GMCLRRFE--- 852
               Y+I I +  +  + E    ++     +GVVP+ +    LI      G     FE   
Sbjct: 219  PEVYTIAINSCSQIGDWEFACKVFDDMTRKGVVPDEMFLSALIDVAGHAGKMDAAFEIIQ 278

Query: 853  ----KAYSLGDPVFSLKSGNPQVDNKWTSLALTVYRETIASGVLPTMEVFSSLLGCLQFP 1020
                K   LG   +S   G       W    L +Y +  +  + PT+   ++L+  L   
Sbjct: 279  EAKAKGAQLGIIPYSSLMGACCNAKNWQK-GLELYEDIKSMKIKPTVATMNALITAL--- 334

Query: 1021 CDTSSRTRLVENL------GVSSDASVCSNLCSLIEGFGEYDPRSFSLLEEATSLGILPC 1182
            CD     + +E L      G+  +    S L    E   + +     LL +A    + P 
Sbjct: 335  CDGDQLPKALEVLSEMKAWGLRPNTITYSILSVASERKDDLE-AGLMLLSQAKKDCVAPT 393

Query: 1183 VSFKACPIIVDARKLQ 1230
            +    C I +  RK +
Sbjct: 394  LIMSKCIISMCLRKFE 409


>ref|XP_003533478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Glycine max]
          Length = 1092

 Score =  744 bits (1921), Expect = 0.0
 Identities = 377/549 (68%), Positives = 448/549 (81%), Gaps = 10/549 (1%)
 Frame = +1

Query: 1    QVAKAFGAYGILRSK*NVKPDRVVFNALITACGQSGAVDRAFDVLAEMKAEPTPVDPDHV 180
            QVAKAFGAYGI+RSK NVKPDRVVFNALI AC QSGA+DRAFDVLAEM AE  P+DPDHV
Sbjct: 545  QVAKAFGAYGIMRSK-NVKPDRVVFNALIAACAQSGALDRAFDVLAEMTAETQPIDPDHV 603

Query: 181  TVGALIKTCTQAGQFDRVHEVYKMIHQYNIKGTPEVYTIAIRSCSQLGDLEFALGVYRDM 360
            T+GAL+K CT+AGQ +R  EVYKM+ +YNIKG PEVYTIAI SCSQ GD EFA  VY DM
Sbjct: 604  TIGALLKACTKAGQVERAKEVYKMVQKYNIKGCPEVYTIAINSCSQTGDWEFAHTVYNDM 663

Query: 361  TRNGVIPDEMFLSALVDVAGHAGKVDVAFEVLQEARTRGIKLGNITYSSLMGACSNAKNW 540
            T+ G++PDE+FLSAL+DVAGHA K+D AF+VLQEAR  GI +G ++YSSLMGACSNA+NW
Sbjct: 664  TQKGILPDEIFLSALIDVAGHAKKLDAAFDVLQEARKGGILIGIMSYSSLMGACSNARNW 723

Query: 541  QKALELYEDIKSFKLTPTVSTLNALVTALCDGDQLQKAVEVLDEMKKGSVSPNIITYSIL 720
            QKALELYE +KS KLT TVST+NAL+TALCDGDQ QKA+EVL EMK   + PN IT+SIL
Sbjct: 724  QKALELYEYLKSLKLTITVSTVNALLTALCDGDQFQKALEVLFEMKGLGLRPNSITFSIL 783

Query: 721  IVASEKKDEVEVGLMLYSQAKNEGVVPNLIICKCLIGMCLRRFEKAYSLGDPVFSLKSGN 900
            IVASEKKD++E   ML S AK +GVVPNLI+C+C+IGMC RRFEKA  +G+PV S  SG 
Sbjct: 784  IVASEKKDDMEAAQMLLSLAKKDGVVPNLIMCRCIIGMCQRRFEKACFVGEPVLSFDSGR 843

Query: 901  PQVDNKWTSLALTVYRETIASGVLPTMEVFSSLLGCLQFPCDTSSRTRLVENLGVSSDAS 1080
            PQVDNKWTSLAL VYRETI +G  PT E+ S +LGCLQ P DTS + RLVENLGVS + S
Sbjct: 844  PQVDNKWTSLALMVYRETIEAGEKPTSEILSQILGCLQLPYDTSVKNRLVENLGVSMETS 903

Query: 1081 VCSNLCSLIEGFGEYDPRSFSLLEEATSLGILPCVSFKACPIIVDARKLQIHTVEVYLLT 1260
              SNLCSL++GFGEYDPR+FS+LEE+ S G++P VS K  P+++DA++L   T EVYL+T
Sbjct: 904  RSSNLCSLMDGFGEYDPRAFSILEESASHGVVPSVSLKVSPVVIDAKELNASTAEVYLIT 963

Query: 1261 ILKGLKHRLAAGARLPNINIVLPVEKTQVLTPKGEKTIKLVGRVGQSIGALLRRLGLPYQ 1440
            +LKGLKHRLAAGARLPNI I+LPVEKT+V++PK +K I L GR GQ++GALLRRL +P+Q
Sbjct: 964  VLKGLKHRLAAGARLPNIIILLPVEKTEVVSPKWKKNINLGGRAGQAVGALLRRLQIPHQ 1023

Query: 1441 GNESYGKIRINGISVKRWFQPKLASP---------QSGKPPEFNSEL-RLGKGISGQQRD 1590
            G+ES GK+RI G+++K+WFQPKLA P          SGKP ++NS L RLGK IS QQR+
Sbjct: 1024 GSESNGKLRIGGLALKKWFQPKLAYPFSVNMGSPTFSGKPGDWNSSLSRLGKSISNQQRN 1083

Query: 1591 IRMRNLYLD 1617
            IR  NL LD
Sbjct: 1084 IRTGNLSLD 1092



 Score = 86.7 bits (213), Expect = 2e-14
 Identities = 81/391 (20%), Positives = 166/391 (42%), Gaps = 4/391 (1%)
 Frame = +1

Query: 94   CGQSGAVDRAFDVLAEMKAEPTPVDPDHVTVGALIKTCTQAGQFDRVHEVYKMIHQYNIK 273
            C +  AV  AFD +   +  P P+     T   L+  C  +   +   +V +++    ++
Sbjct: 439  CKKRKAVKEAFDFI---RLIPNPMLS---TFNMLMSVCASSQDSEGAFQVLQLLKDARLE 492

Query: 274  GTPEVYTIAIRSCSQLGDLEFALGVYRDMTRNGVIPDEMFLSALVDVAGHAGKVDVAFEV 453
               ++YT  I +C++ G ++    V+  M  +GV P+     AL+D    AG+V  AF  
Sbjct: 493  PDCKLYTTLILTCAKSGKVDLMFEVFHKMVNSGVEPNVHTYGALIDGCARAGQVAKAFGA 552

Query: 454  LQEARTRGIKLGNITYSSLMGACSNAKNWQKALELYEDI--KSFKLTPTVSTLNALVTAL 627
                R++ +K   + +++L+ AC+ +    +A ++  ++  ++  + P   T+ AL+ A 
Sbjct: 553  YGIMRSKNVKPDRVVFNALIAACAQSGALDRAFDVLAEMTAETQPIDPDHVTIGALLKAC 612

Query: 628  CDGDQLQKAVEVLDEMKKGSVSPNIITYSILIVASEKKDEVEVGLMLYSQAKNEGVVPNL 807
                Q+++A EV   ++K ++      Y+I I +  +  + E    +Y+    +G++P+ 
Sbjct: 613  TKAGQVERAKEVYKMVQKYNIKGCPEVYTIAINSCSQTGDWEFAHTVYNDMTQKGILPDE 672

Query: 808  IICKCLIGMCLRRFEKAYSLGDPVFSLKSGNPQVDNKWTSLALTVYRETIASGVLPTMEV 987
            I    LI +                   +G+     K    A  V +E    G+L  +  
Sbjct: 673  IFLSALIDV-------------------AGHA----KKLDAAFDVLQEARKGGILIGIMS 709

Query: 988  FSSLLGCLQFPCDTSSRTRLVENLGVSSDASVCSNLCSLIEGF--GEYDPRSFSLLEEAT 1161
            +SSL+G      +      L E L         S + +L+     G+   ++  +L E  
Sbjct: 710  YSSLMGACSNARNWQKALELYEYLKSLKLTITVSTVNALLTALCDGDQFQKALEVLFEMK 769

Query: 1162 SLGILPCVSFKACPIIVDARKLQIHTVEVYL 1254
             LG+ P     +  I+   +K  +   ++ L
Sbjct: 770  GLGLRPNSITFSILIVASEKKDDMEAAQMLL 800