BLASTX nr result

ID: Coptis21_contig00005554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005554
         (965 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275707.1| PREDICTED: probable plastid-lipid-associated...   317   4e-84
emb|CBI23860.3| unnamed protein product [Vitis vinifera]              311   1e-82
ref|NP_001238621.1| uncharacterized protein LOC100306679 [Glycin...   306   6e-81
ref|XP_004142550.1| PREDICTED: probable plastid-lipid-associated...   305   1e-80
ref|XP_002528606.1| structural molecule, putative [Ricinus commu...   304   2e-80

>ref|XP_002275707.1| PREDICTED: probable plastid-lipid-associated protein 4,
           chloroplastic [Vitis vinifera]
          Length = 245

 Score =  317 bits (811), Expect = 4e-84
 Identities = 171/251 (68%), Positives = 200/251 (79%), Gaps = 4/251 (1%)
 Frame = +1

Query: 22  SMAFSSPSSLSTLAVPTLIPNSTSSL----FPLQRLLLHSSTNNTSIRTNEFSLKITTHS 189
           +++  SPSSL T   P+  P+S + L     PL +   H + N+ ++ +N       + S
Sbjct: 2   ALSLHSPSSLLTPIQPSK-PSSLTLLNCQYSPLTKPTNHITYNDAAVLSNP------SPS 54

Query: 190 EKWRVGVSFIPSFFKTKKDVKALKEELLEAISLLDRGADATPEDQERIDKMAKELEALSP 369
           +KWRVGVSF P+F K  KD KALKEELL+AI+ LDRGADAT EDQ+R+D++A ELEA++ 
Sbjct: 55  KKWRVGVSFFPAFLKKGKDAKALKEELLDAIAPLDRGADATLEDQQRVDQIASELEAVNS 114

Query: 370 VKETLKSDLLNGKWELIYTTSTSILQTQRPKFLRSKVNYQAINVDTLRAQNMESGPFFNQ 549
           +KE LKSDLLNGKWELIYTTS SILQTQRPKFLRS  NYQAINVDTLRAQNMES PFFNQ
Sbjct: 115 IKEPLKSDLLNGKWELIYTTSQSILQTQRPKFLRSIANYQAINVDTLRAQNMESFPFFNQ 174

Query: 550 VTADLKPLNARKVAVKFDYFKILGLIPVKAPDRATGELEITYLDEDLRISRGDKGNLFIL 729
           VTADL PL A+KVAVKFD FKILGLIP+KAP RA GELEITYLDE+LR+SRGDKGNLFIL
Sbjct: 175 VTADLTPLTAKKVAVKFDSFKILGLIPIKAPGRARGELEITYLDEELRVSRGDKGNLFIL 234

Query: 730 QMIDRSYRVPV 762
           +MID SYRVPV
Sbjct: 235 KMIDPSYRVPV 245


>emb|CBI23860.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score =  311 bits (797), Expect = 1e-82
 Identities = 161/220 (73%), Positives = 184/220 (83%)
 Frame = +1

Query: 103 PLQRLLLHSSTNNTSIRTNEFSLKITTHSEKWRVGVSFIPSFFKTKKDVKALKEELLEAI 282
           PL +   H + N+ ++ +N       + S+KWRVGVSF P+F K  KD KALKEELL+AI
Sbjct: 15  PLTKPTNHITYNDAAVLSNP------SPSKKWRVGVSFFPAFLKKGKDAKALKEELLDAI 68

Query: 283 SLLDRGADATPEDQERIDKMAKELEALSPVKETLKSDLLNGKWELIYTTSTSILQTQRPK 462
           + LDRGADAT EDQ+R+D++A ELEA++ +KE LKSDLLNGKWELIYTTS SILQTQRPK
Sbjct: 69  APLDRGADATLEDQQRVDQIASELEAVNSIKEPLKSDLLNGKWELIYTTSQSILQTQRPK 128

Query: 463 FLRSKVNYQAINVDTLRAQNMESGPFFNQVTADLKPLNARKVAVKFDYFKILGLIPVKAP 642
           FLRS  NYQAINVDTLRAQNMES PFFNQVTADL PL A+KVAVKFD FKILGLIP+KAP
Sbjct: 129 FLRSIANYQAINVDTLRAQNMESFPFFNQVTADLTPLTAKKVAVKFDSFKILGLIPIKAP 188

Query: 643 DRATGELEITYLDEDLRISRGDKGNLFILQMIDRSYRVPV 762
            RA GELEITYLDE+LR+SRGDKGNLFIL+MID SYRVPV
Sbjct: 189 GRARGELEITYLDEELRVSRGDKGNLFILKMIDPSYRVPV 228


>ref|NP_001238621.1| uncharacterized protein LOC100306679 [Glycine max]
           gi|255629261|gb|ACU14975.1| unknown [Glycine max]
          Length = 242

 Score =  306 bits (783), Expect = 6e-81
 Identities = 161/247 (65%), Positives = 192/247 (77%), Gaps = 1/247 (0%)
 Frame = +1

Query: 25  MAFSSPSSLSTLAVPTLIPNSTSSLFPLQRLLLHSSTNNTSIRTNEFSLKITTHSEKWRV 204
           MA SSPS  S +     +P+     F    L L SS    ++R +   + ++ H+ KWR 
Sbjct: 1   MALSSPSLFSAVNATYSVPH-----FHALPLSLSSSYFPINVRPSTHHVLVSDHNHKWRT 55

Query: 205 GVSFIPSFFKTK-KDVKALKEELLEAISLLDRGADATPEDQERIDKMAKELEALSPVKET 381
            VSF  SF K K KD K +KEELLEAI+ LDRGADATP+DQ+ +D++A+ELEA++P+KE 
Sbjct: 56  KVSFFTSFLKQKGKDAKIIKEELLEAIAPLDRGADATPQDQQTVDQIARELEAVTPIKEP 115

Query: 382 LKSDLLNGKWELIYTTSTSILQTQRPKFLRSKVNYQAINVDTLRAQNMESGPFFNQVTAD 561
           LKS+LL+GKWELIYTTS SILQT+RPK LRS  NYQAINVDTLRAQNMES PFFNQVTAD
Sbjct: 116 LKSNLLDGKWELIYTTSQSILQTKRPKLLRSVANYQAINVDTLRAQNMESWPFFNQVTAD 175

Query: 562 LKPLNARKVAVKFDYFKILGLIPVKAPDRATGELEITYLDEDLRISRGDKGNLFILQMID 741
           L PLN RKVAVKFD FKI G+IP+KAP RA GELEITYLDE+LR+SRGDKGNLFIL+M+D
Sbjct: 176 LTPLNPRKVAVKFDTFKIGGIIPIKAPGRARGELEITYLDEELRLSRGDKGNLFILKMVD 235

Query: 742 RSYRVPV 762
            SYRVP+
Sbjct: 236 PSYRVPI 242


>ref|XP_004142550.1| PREDICTED: probable plastid-lipid-associated protein 4,
           chloroplastic-like [Cucumis sativus]
           gi|449479703|ref|XP_004155682.1| PREDICTED: probable
           plastid-lipid-associated protein 4, chloroplastic-like
           [Cucumis sativus]
          Length = 243

 Score =  305 bits (780), Expect = 1e-80
 Identities = 167/241 (69%), Positives = 193/241 (80%), Gaps = 4/241 (1%)
 Frame = +1

Query: 52  STLAVPT--LIPNSTSSLFPLQRLLLHSSTNNTSIRTNEFSLKITTHSEKWRVGVSFIPS 225
           S+ A PT  L P STS      R LL    +N S  TN   L  ++ S KWR+ +SF P+
Sbjct: 9   SSTATPTTKLWPPSTSQP---PRFLLPIIPSNPSSNTN---LLTSSPSHKWRLRISFFPA 62

Query: 226 FFKTKK--DVKALKEELLEAISLLDRGADATPEDQERIDKMAKELEALSPVKETLKSDLL 399
           F    K  +V ALK+ELL+AI  LDRGA+ATPEDQE +D+++++LEA++P KE LKSDLL
Sbjct: 63  FLNKGKGNNVTALKQELLQAIEPLDRGAEATPEDQEMVDQISRKLEAVNPTKEPLKSDLL 122

Query: 400 NGKWELIYTTSTSILQTQRPKFLRSKVNYQAINVDTLRAQNMESGPFFNQVTADLKPLNA 579
           NGKWELIYTTS SILQT+RPKFLRSK+NYQ INVD+LRAQNMES PFFNQVTADLKPLN+
Sbjct: 123 NGKWELIYTTSRSILQTERPKFLRSKLNYQGINVDSLRAQNMESWPFFNQVTADLKPLNS 182

Query: 580 RKVAVKFDYFKILGLIPVKAPDRATGELEITYLDEDLRISRGDKGNLFILQMIDRSYRVP 759
           RKVAV+FD FKILGLIPVKAP RA GELEITYLDE+LRISRGDKGNLFIL+MID SYRVP
Sbjct: 183 RKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYRVP 242

Query: 760 V 762
           V
Sbjct: 243 V 243


>ref|XP_002528606.1| structural molecule, putative [Ricinus communis]
           gi|223531951|gb|EEF33764.1| structural molecule,
           putative [Ricinus communis]
          Length = 262

 Score =  304 bits (778), Expect = 2e-80
 Identities = 158/246 (64%), Positives = 191/246 (77%), Gaps = 4/246 (1%)
 Frame = +1

Query: 34  SSPSSLSTLAVPTLIPN---STSSLFPLQRLLLHSSTNNTSIRTNEFSL-KITTHSEKWR 201
           SSP+ L+     T  PN   +T++ +   R +  + +  + +  N  +    +T  +KWR
Sbjct: 16  SSPAILTASHFSTNPPNPKLTTTTFYFSSRFITANYSKTSFLNLNSSNNDNNSTFDDKWR 75

Query: 202 VGVSFIPSFFKTKKDVKALKEELLEAISLLDRGADATPEDQERIDKMAKELEALSPVKET 381
             VSF P+F + KKD   LKEELL+AI+ LDRGA+ATPEDQ+R+D++A++LEA++P K+ 
Sbjct: 76  AKVSFFPAFLRKKKDANVLKEELLDAIASLDRGAEATPEDQQRVDEIARQLEAVNPTKQP 135

Query: 382 LKSDLLNGKWELIYTTSTSILQTQRPKFLRSKVNYQAINVDTLRAQNMESGPFFNQVTAD 561
           LKSDL+NGKWELIYTTS SILQTQRPKFLRSK NYQAINVDTLRAQNMES PFFNQVTAD
Sbjct: 136 LKSDLINGKWELIYTTSQSILQTQRPKFLRSKTNYQAINVDTLRAQNMESWPFFNQVTAD 195

Query: 562 LKPLNARKVAVKFDYFKILGLIPVKAPDRATGELEITYLDEDLRISRGDKGNLFILQMID 741
           L PLNA+KVAVKFD FKI  LIPVKAP  A GELE TYLDE+LRISRGDKGNLF+L+MID
Sbjct: 196 LTPLNAKKVAVKFDTFKIASLIPVKAPGSARGELETTYLDEELRISRGDKGNLFVLKMID 255

Query: 742 RSYRVP 759
            SYRVP
Sbjct: 256 PSYRVP 261


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