BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005551
         (845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234016.1| GTP-binding nuclear protein Ran1 [Solanum ly...   257   2e-66
ref|XP_002866070.1| predicted protein [Arabidopsis lyrata subsp....   255   1e-65
emb|CBI21000.3| unnamed protein product [Vitis vinifera]              255   1e-65
ref|XP_002284967.1| PREDICTED: GTP-binding nuclear protein Ran-3...   255   1e-65
emb|CBI28152.3| unnamed protein product [Vitis vinifera]              255   1e-65

>ref|NP_001234016.1| GTP-binding nuclear protein Ran1 [Solanum lycopersicum]
           gi|585777|sp|P38546.1|RAN1_SOLLC RecName:
           Full=GTP-binding nuclear protein Ran1; AltName:
           Full=Ras-related nuclear protein 1
           gi|453561|gb|AAC37402.1| Ran protein/TC4 protein
           [Solanum lycopersicum] gi|77745509|gb|ABB02653.1|
           Ran/TC4-like protein [Solanum tuberosum]
           gi|82623375|gb|ABB87102.1| Ran protein/TC4 protein-like
           [Solanum tuberosum]
          Length = 221

 Score =  257 bits (657), Expect = 2e-66
 Identities = 124/146 (84%), Positives = 126/146 (86%)
 Frame = +3

Query: 3   GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVK 182
           GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVK
Sbjct: 76  GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVK 135

Query: 183 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVHIDXX 362
           AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPEVHID  
Sbjct: 136 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDGNLHFVESPALAPPEVHIDLA 195

Query: 363 XXXXXXXXXXXXSHQPLPXXXXELFE 440
                       ++QPLP    E FE
Sbjct: 196 AQALHEEELQQAANQPLPDDDDEAFE 221


>ref|XP_002866070.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311905|gb|EFH42329.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 193

 Score =  255 bits (651), Expect = 1e-65
 Identities = 123/146 (84%), Positives = 125/146 (85%)
 Frame = +3

Query: 3   GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVK 182
           GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVK
Sbjct: 48  GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVK 107

Query: 183 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVHIDXX 362
           AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPEVHID  
Sbjct: 108 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDKNLHFVESPALAPPEVHIDHA 167

Query: 363 XXXXXXXXXXXXSHQPLPXXXXELFE 440
                       + QPLP    + FE
Sbjct: 168 AQQKNEADLIAAASQPLPDDDDDAFE 193


>emb|CBI21000.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score =  255 bits (651), Expect = 1e-65
 Identities = 123/146 (84%), Positives = 125/146 (85%)
 Frame = +3

Query: 3   GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVK 182
           GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVK
Sbjct: 109 GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVK 168

Query: 183 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVHIDXX 362
           AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPEVHID  
Sbjct: 169 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVHIDLA 228

Query: 363 XXXXXXXXXXXXSHQPLPXXXXELFE 440
                       + QPLP    + FE
Sbjct: 229 AQQQHEAELAAAASQPLPDDDDDAFE 254


>ref|XP_002284967.1| PREDICTED: GTP-binding nuclear protein Ran-3-like [Vitis vinifera]
           gi|225445410|ref|XP_002285018.1| PREDICTED: GTP-binding
           nuclear protein Ran-3-like [Vitis vinifera]
          Length = 221

 Score =  255 bits (651), Expect = 1e-65
 Identities = 123/146 (84%), Positives = 125/146 (85%)
 Frame = +3

Query: 3   GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVK 182
           GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVK
Sbjct: 76  GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVK 135

Query: 183 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVHIDXX 362
           AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPEVHID  
Sbjct: 136 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVHIDLA 195

Query: 363 XXXXXXXXXXXXSHQPLPXXXXELFE 440
                       + QPLP    + FE
Sbjct: 196 AQQQHEAELAAAASQPLPDDDDDAFE 221


>emb|CBI28152.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  255 bits (651), Expect = 1e-65
 Identities = 123/146 (84%), Positives = 125/146 (85%)
 Frame = +3

Query: 3   GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVK 182
           GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVK
Sbjct: 115 GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVK 174

Query: 183 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVHIDXX 362
           AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPEVHID  
Sbjct: 175 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVHIDLA 234

Query: 363 XXXXXXXXXXXXSHQPLPXXXXELFE 440
                       + QPLP    + FE
Sbjct: 235 AQQQHEAELAAAASQPLPDDDDDAFE 260