BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005549
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271649.1| PREDICTED: ATP-dependent Clp protease proteo...   420   e-115
ref|XP_003552706.1| PREDICTED: ATP-dependent Clp protease proteo...   416   e-114
gb|ACU19554.1| unknown [Glycine max]                                  412   e-113
ref|XP_003518640.1| PREDICTED: ATP-dependent Clp protease proteo...   412   e-113
ref|XP_004167647.1| PREDICTED: ATP-dependent Clp protease proteo...   405   e-111

>ref|XP_002271649.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic [Vitis vinifera]
          Length = 320

 Score =  420 bits (1080), Expect = e-115
 Identities = 207/251 (82%), Positives = 222/251 (88%), Gaps = 8/251 (3%)
 Frame = -2

Query: 925 APEWMPRPEELDANNMLLRQRIVFLGSQVDDVTADYIISQLLFLDAEDNTKDIKLFINSP 746
           AP W+PR E+LD  NMLLRQRIVFLGSQVDD+TAD +ISQLLFLDAED  KDIKLFINSP
Sbjct: 70  APTWLPRFEDLDTTNMLLRQRIVFLGSQVDDMTADLVISQLLFLDAEDQEKDIKLFINSP 129

Query: 745 GGSVTAGMGIYDAMKMCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNARVMIHQPLG 566
           GGSVTAG+GIYDAMK+CKADVSTVCLGLAASMGAFLLASGSKGKRFCMPN+RVMIHQPLG
Sbjct: 130 GGSVTAGLGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNSRVMIHQPLG 189

Query: 565 TSGGKASEMGLRIREMMYHKTKLNKILSRITGKPEHQVELDTDRDNFMNPWEAKEYGLVD 386
           T+GGKA+EMG+RIREMMYHK KLNKILSRITGKPE Q+E DTDRDNFMN WEAKEYGL+D
Sbjct: 190 TAGGKATEMGIRIREMMYHKIKLNKILSRITGKPEQQIEADTDRDNFMNAWEAKEYGLID 249

Query: 385 AVIDDGKPGLVAPIGDATPPPKTRVWDQWKVEGRRKAMKNLPSEEKLYQNG--------G 230
           AVIDDGKPGLVAP  DA PPPKTRVW  WKVEG RKA KNLPSE KL QNG        G
Sbjct: 250 AVIDDGKPGLVAPTADAGPPPKTRVWGLWKVEGSRKAKKNLPSEHKLLQNGHQGGDDEKG 309

Query: 229 QEQEREAAAPV 197
            EQE+EA++PV
Sbjct: 310 TEQEKEASSPV 320


>ref|XP_003552706.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic-like [Glycine max]
          Length = 322

 Score =  416 bits (1068), Expect = e-114
 Identities = 198/233 (84%), Positives = 216/233 (92%)
 Frame = -2

Query: 925 APEWMPRPEELDANNMLLRQRIVFLGSQVDDVTADYIISQLLFLDAEDNTKDIKLFINSP 746
           A  W+PR EELDA NMLLRQRI+FLGSQVDD+TAD+IISQLLFLDAED+ KDIKLFINSP
Sbjct: 69  ASPWLPRFEELDATNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSKKDIKLFINSP 128

Query: 745 GGSVTAGMGIYDAMKMCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNARVMIHQPLG 566
           GGSVTAGMGIYDAMK+CKADVSTVCLGLAASMGAF+LASG+KGKR+CMPN+RVMIHQPLG
Sbjct: 129 GGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFILASGTKGKRYCMPNSRVMIHQPLG 188

Query: 565 TSGGKASEMGLRIREMMYHKTKLNKILSRITGKPEHQVELDTDRDNFMNPWEAKEYGLVD 386
           T+GGKA+EM +RIREM YHK K+NKILSRITGKPE Q+ELDTDRDNFMNPWEAKEYGLVD
Sbjct: 189 TAGGKATEMSIRIREMAYHKIKINKILSRITGKPEEQIELDTDRDNFMNPWEAKEYGLVD 248

Query: 385 AVIDDGKPGLVAPIGDATPPPKTRVWDQWKVEGRRKAMKNLPSEEKLYQNGGQ 227
            VIDDGKPGLVAPIGDA+PPPKTRVWDQWK+EG RKA KNLPSE K  QN  +
Sbjct: 249 GVIDDGKPGLVAPIGDASPPPKTRVWDQWKIEGSRKAKKNLPSEHKFLQNASK 301


>gb|ACU19554.1| unknown [Glycine max]
          Length = 322

 Score =  412 bits (1060), Expect = e-113
 Identities = 197/233 (84%), Positives = 214/233 (91%)
 Frame = -2

Query: 925 APEWMPRPEELDANNMLLRQRIVFLGSQVDDVTADYIISQLLFLDAEDNTKDIKLFINSP 746
           A  W+PR EELDA NMLLRQRI+FLGSQVDD+TAD+IISQLLFLDAED+ KDIKLFIN P
Sbjct: 69  ASPWLPRFEELDATNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSKKDIKLFINPP 128

Query: 745 GGSVTAGMGIYDAMKMCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNARVMIHQPLG 566
           GGSVTAGMGIYDAMK+CKADVSTVCLGLAASMGAF+LASG+KGKR+CMPN+RVMIHQPLG
Sbjct: 129 GGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFILASGTKGKRYCMPNSRVMIHQPLG 188

Query: 565 TSGGKASEMGLRIREMMYHKTKLNKILSRITGKPEHQVELDTDRDNFMNPWEAKEYGLVD 386
           T+GGKA+EM +RIREM YHK K+NKILSRITGKPE Q+ELDTDRDNFMNPWEAKEYGLVD
Sbjct: 189 TAGGKATEMSIRIREMAYHKIKINKILSRITGKPEEQIELDTDRDNFMNPWEAKEYGLVD 248

Query: 385 AVIDDGKPGLVAPIGDATPPPKTRVWDQWKVEGRRKAMKNLPSEEKLYQNGGQ 227
            VIDDGKPGLVAPIGDA PPPKTRVWDQWK+EG RKA KNLPSE K  QN  +
Sbjct: 249 GVIDDGKPGLVAPIGDAFPPPKTRVWDQWKIEGSRKAKKNLPSEHKFLQNASK 301


>ref|XP_003518640.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic-like [Glycine max]
          Length = 319

 Score =  412 bits (1058), Expect = e-113
 Identities = 196/233 (84%), Positives = 215/233 (92%)
 Frame = -2

Query: 925 APEWMPRPEELDANNMLLRQRIVFLGSQVDDVTADYIISQLLFLDAEDNTKDIKLFINSP 746
           A  W+PR EELDA NMLLRQRI+FLGSQVDD+TAD+IISQLLFLDAED+ KDIKLFINSP
Sbjct: 69  ASPWLPRFEELDATNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSKKDIKLFINSP 128

Query: 745 GGSVTAGMGIYDAMKMCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNARVMIHQPLG 566
           GGSVTAGMGIYDAMK+CKADVSTVCLGLAASMGAF+LASG+KGKR+CMPN+RVMIHQPLG
Sbjct: 129 GGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFILASGTKGKRYCMPNSRVMIHQPLG 188

Query: 565 TSGGKASEMGLRIREMMYHKTKLNKILSRITGKPEHQVELDTDRDNFMNPWEAKEYGLVD 386
           T+GGKA+EM +RIREM YHK K+NKILSRITGKPE Q+ELDTDRDNFMNPWEAKEYGLVD
Sbjct: 189 TAGGKATEMSIRIREMAYHKIKINKILSRITGKPEEQIELDTDRDNFMNPWEAKEYGLVD 248

Query: 385 AVIDDGKPGLVAPIGDATPPPKTRVWDQWKVEGRRKAMKNLPSEEKLYQNGGQ 227
            VIDDGKPGLVAPIGD++PPPKTRVWD WK+EG RKA KNLPSE K  QN  +
Sbjct: 249 GVIDDGKPGLVAPIGDSSPPPKTRVWDLWKIEGSRKAKKNLPSEHKFLQNASK 301


>ref|XP_004167647.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic-like [Cucumis sativus]
          Length = 339

 Score =  405 bits (1041), Expect = e-111
 Identities = 199/251 (79%), Positives = 217/251 (86%), Gaps = 12/251 (4%)
 Frame = -2

Query: 913 MPRPEELDANNMLLRQRIVFLGSQVDDVTADYIISQLLFLDAEDNTKDIKLFINSPGGSV 734
           +PR EELD  NMLLRQRI+FLGSQVDD+TAD+IISQLLFLDAED TKDIKLFINSPGGSV
Sbjct: 89  LPRFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSV 148

Query: 733 TAGMGIYDAMKMCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNARVMIHQPLGTSGG 554
           TAGMGIYDAMK+CKADVSTVCLGLAASMGAFLLASGSKGKRFCMPN RVMIHQPLGT+GG
Sbjct: 149 TAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGG 208

Query: 553 KASEMGLRIREMMYHKTKLNKILSRITGKPEHQVELDTDRDNFMNPWEAKEYGLVDAVID 374
           KA+EM +RIREM YHK KLNKI SRITGKP  Q+ELDT+RDNFMNPWEAKEYGL+D VID
Sbjct: 209 KATEMSIRIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVID 268

Query: 373 DGKPGLVAPIGDATPPPKTRVWDQWKVEGRRKAMKNLPSEEKLYQNG------------G 230
           DGKPGL+API +ATPPPKTR+WD WKVEG RKA KNLPSE K+ +NG            G
Sbjct: 269 DGKPGLIAPIAEATPPPKTRIWDLWKVEGSRKAKKNLPSESKILKNGYEEGGQGSDKERG 328

Query: 229 QEQEREAAAPV 197
            +QE E  +PV
Sbjct: 329 GQQETEEPSPV 339