BLASTX nr result

ID: Coptis21_contig00005547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005547
         (1522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253...   360   7e-97
ref|XP_003516741.1| PREDICTED: uncharacterized protein LOC100800...   328   2e-87
ref|XP_002525522.1| nucleic acid binding protein, putative [Rici...   327   5e-87
ref|XP_002325510.1| predicted protein [Populus trichocarpa] gi|2...   322   1e-85
ref|XP_003537947.1| PREDICTED: uncharacterized protein LOC100786...   307   5e-81

>ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253453 [Vitis vinifera]
          Length = 772

 Score =  360 bits (923), Expect = 7e-97
 Identities = 211/432 (48%), Positives = 243/432 (56%), Gaps = 15/432 (3%)
 Frame = +2

Query: 2    PVKPSPLSGGYNQQAYRARGPGGPPQWGSRTHSASQATIYDNQQRGMYPSHNQ-YMPPAY 178
            PV+ S   G YNQQ YR RGP GP QWG R     Q T YD  QRG YPS NQ Y PP+Y
Sbjct: 346  PVRSSTYPGSYNQQGYRPRGPTGPSQWGPRGPHPGQPTGYD-YQRGAYPSQNQQYAPPSY 404

Query: 179  GGYPSQQTAPRNNFNAGWDQR-SGSMQTPQXXXXXXXXXXXXXXXXXAPNPMPNS----- 340
            GGYP QQ APR++F +GW+QR   +MQ P                  AP   P+S     
Sbjct: 405  GGYPPQQMAPRSSFGSGWEQRPPANMQGPPQSGGYDFYGGQGGHGPDAPAAAPHSASMSI 464

Query: 341  ---GHVPASAHGAPPTHVTYNNXXXXXXXXXXXXXXSQSAPSQHSYGHGYEDPKYANQVP 511
               G  P+   G PP+   YN               SQ+ P Q  YGHGY++PKY  Q P
Sbjct: 465  HAPGPSPSPGMGPPPSQGNYNYGQPQGPDYGQQAQYSQTGPPQQGYGHGYDEPKYEGQAP 524

Query: 512  AQPAYGGHGNAQPGAYPQQVATQPGY-AQQPYSKPPTYGMPSQGPAPQSYGQPRASQPGD 688
              P YGGHG +QP  YPQ  A Q GY  QQPY KP +YGM SQ PA QSYG PRASQPGD
Sbjct: 525  THPPYGGHG-SQP-VYPQGGA-QSGYPPQQPYGKPQSYGMASQAPAAQSYGPPRASQPGD 581

Query: 689  VPYQNPVSSAHSYGQTVPSQQPYPYAASGPTQQAYPYGSAPPANDGYSQPPTHSAPAPVY 868
            VPYQ P+SS  SYG  VP QQ YPYA+SGP QQ+YP   + PA DGY+QP   S P   Y
Sbjct: 582  VPYQGPMSSNQSYGPNVPPQQ-YPYASSGPMQQSYPAYGSQPAADGYNQPQPASGPG--Y 638

Query: 869  PQPGGQPV-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQSAPNNANY-YQGPTDTG 1042
            PQ GGQP+                                 +Q   NNA Y YQG  D  
Sbjct: 639  PQQGGQPMSGYSQPGGQQAPGYAQVGPQGGYGPYPSQPGYAEQQTANNAAYGYQGSADPT 698

Query: 1043 YSNAPTSAYGAPPSAQAGYVQQASSNQPAYEQP-AAQSGGYPSVPGSAP-GFVKTLSPQP 1216
            Y++ P SAYGA PS Q GYV Q +  QP+Y+Q   AQSGGY +VP +AP G+ K+LSPQP
Sbjct: 699  YNSGPASAYGAQPSGQPGYV-QPTPTQPSYDQSIPAQSGGYGAVPATAPVGYGKSLSPQP 757

Query: 1217 VYGQYDSTQMYG 1252
             Y QYD+TQMYG
Sbjct: 758  GYPQYDATQMYG 769


>ref|XP_003516741.1| PREDICTED: uncharacterized protein LOC100800173 [Glycine max]
          Length = 793

 Score =  328 bits (842), Expect = 2e-87
 Identities = 209/437 (47%), Positives = 235/437 (53%), Gaps = 20/437 (4%)
 Frame = +2

Query: 2    PVKPSPLSGGYNQQAYRA-RGPGGPPQWGSRTHSASQATIYDNQQRGMYPSHNQ-YMPPA 175
            PV+PS  SGG+ QQAYR  RG GGPPQWG R     Q T YD Q RG YPSHNQ Y PP 
Sbjct: 368  PVRPS--SGGFGQQAYRPPRGSGGPPQWGQRGSHFGQPTAYDYQHRGPYPSHNQPYAPPP 425

Query: 176  YGGYPSQQTAPRNNFNAGWDQR-SGSMQTPQXXXXXXXXXXXXXXXXXAPNPMPNSGHVP 352
            YG YP Q  APR++F +GW+QR   S Q P                    +  P S  +P
Sbjct: 426  YGNYP-QHMAPRSSFGSGWEQRPHHSFQGPPPHNGGYEYYGGQGGHL---SEAPPSTQLP 481

Query: 353  ASA--HGA----------PPTHVTYNNXXXXXXXXXXXXXXSQSAPSQHSYGHGYEDPKY 496
            +SA  HGA           P  V YN               SQ+   Q  YG GY++ KY
Sbjct: 482  SSAPPHGAGPSPVPSMVPTPAQVNYNYGQPQGQDYGHQTAYSQAGLPQQGYGQGYDESKY 541

Query: 497  ANQVPAQPAYGGHGNAQPGAYPQQVATQPGY-AQQPYSKPPTYGMPSQGPAPQSYGQPRA 673
             N+ P Q +YGGH N+Q   YPQ VA QP Y A Q Y KPP YGMPSQG  PQSYG PRA
Sbjct: 542  ENRAPTQHSYGGHVNSQ-STYPQAVA-QPNYPAPQQYGKPPLYGMPSQGQPPQSYGPPRA 599

Query: 674  SQPGDVPYQNPVSSAHSYGQTVPSQQPYPYAASGPTQQAYP-YGSAPPANDGYSQPPTHS 850
            +QPGD+PYQ   + A SYG  +P+QQPYPYA SGP+Q AYP YGSAP A DGYS PP   
Sbjct: 600  TQPGDMPYQGS-TPAQSYGTNMPTQQPYPYAVSGPSQTAYPSYGSAPAA-DGYSHPP--P 655

Query: 851  APAPVYPQPGGQPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQSAPNNANY-YQG 1027
            A  P Y QPG QP                                 +Q APNNA Y YQ 
Sbjct: 656  ASGPPYTQPGAQPT-YGQPAAQPAASYAQVGPTGYGSYPSSQPSYPEQPAPNNAVYGYQA 714

Query: 1028 PTDTGYSNAPTSAYG-APPSAQAGYVQQASSNQPAYEQPAAQSGGYPSVPGSAPG-FVKT 1201
            P D GYS     AY  A PS Q GYV Q +  Q  YEQ   Q  GY +VP SA   + KT
Sbjct: 715  PQDPGYSTGAAPAYSTAQPSGQPGYV-QPTPTQTGYEQSNTQPAGYAAVPASASAVYGKT 773

Query: 1202 LSPQPVYGQYDSTQMYG 1252
            LSPQP   QYDSTQ+YG
Sbjct: 774  LSPQPAAYQYDSTQVYG 790


>ref|XP_002525522.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223535201|gb|EEF36880.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 798

 Score =  327 bits (838), Expect = 5e-87
 Identities = 201/432 (46%), Positives = 229/432 (53%), Gaps = 17/432 (3%)
 Frame = +2

Query: 5    VKPSPLSGGYNQQ-AYRARGPGGPPQWGSRTHSASQATIYDNQQRGMYPSHN-QYMPPAY 178
            V+ SPLSGGYNQQ +YR RGP GP  WG R   +SQ + YD   RG YPS N QY PP+Y
Sbjct: 371  VRLSPLSGGYNQQQSYRPRGPTGPSHWGPRGPHSSQPSPYDYHHRGPYPSQNSQYPPPSY 430

Query: 179  GGYPSQQTAPRNNFNAGWDQRSGSMQTPQXXXXXXXXXXXXXXXXX-----APNPMPNSG 343
            GGYP Q   PR NF +GW+QR  +MQ P                       AP   P +G
Sbjct: 431  GGYPPQHMGPRGNFGSGWEQRPPNMQGPVSHGGGYDYYGGQGGHVPDHPSSAPISNPITG 490

Query: 344  HV----PASAHGAPPTHVTYNNXXXXXXXXXXXXXXSQSAPSQHSYGHGYEDPKYANQVP 511
            H     P    G PP+   YN               SQ A SQH YGHGY++PKY +   
Sbjct: 491  HATGPSPTPGMGHPPSQANYNYGQQHGPDYGHQAPYSQ-AVSQHGYGHGYDEPKYDSHAQ 549

Query: 512  AQPAYGGHGNAQPGAYPQQVATQPGY-AQQPYSKPPTYGMPSQGPAPQSYGQPRASQPGD 688
             Q  YG HGN QP  YPQ  + QPGY AQQ Y K P+YGM  QGP PQSYG PR  QPGD
Sbjct: 550  TQHPYG-HGNPQP-VYPQ-ASNQPGYGAQQQYGKQPSYGMLPQGP-PQSYGPPRPGQPGD 605

Query: 689  VPYQNPVSSAHSYGQTVPSQQPYPYAASGPTQQAYPYGSAPPANDGYSQPPTHSAPAPVY 868
            +PYQ P  S+ SYG  VP QQ YPYA+SGP QQAYP   AP A DGY+Q    S P   Y
Sbjct: 606  MPYQAPNPSSQSYGSNVPPQQQYPYASSGPMQQAYPSYGAPSATDGYNQGLPASVPG--Y 663

Query: 869  PQPGGQPV-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQSAPNNANY-YQGPTDTG 1042
            PQ  GQ V                                 +Q A N+A Y YQG  D  
Sbjct: 664  PQQAGQSVASYGQPGGQQASAYVQGPSGGYGSYPSSQQAYPEQPAQNSAGYGYQGSQDPA 723

Query: 1043 YSNAPTSAYGAPPSAQAGYVQQASSNQPAYEQPAAQSGGYPSV--PGSAP-GFVKTLSPQ 1213
            Y+  P SAY AP S Q GY  Q +  QP+Y+Q   QS  Y +   P SAP  + KT+SPQ
Sbjct: 724  YATGPGSAYAAPASGQQGYA-QPTPTQPSYDQSVPQSTAYAAAAPPASAPVSYGKTVSPQ 782

Query: 1214 PVYGQYDSTQMY 1249
            P Y QYDSTQMY
Sbjct: 783  PGYPQYDSTQMY 794


>ref|XP_002325510.1| predicted protein [Populus trichocarpa] gi|222862385|gb|EEE99891.1|
            predicted protein [Populus trichocarpa]
          Length = 581

 Score =  322 bits (826), Expect = 1e-85
 Identities = 194/430 (45%), Positives = 232/430 (53%), Gaps = 15/430 (3%)
 Frame = +2

Query: 5    VKPSPLSGGYNQQ-AYRARGPGGPPQWGSRTHSASQATIYDNQQRGMYPSHNQYMPPAYG 181
            V+PS LS  +NQQ +YR RGP GP  WG R   ++Q   YD Q RG YPSH    PPAYG
Sbjct: 166  VRPSTLSSSFNQQQSYRPRGPTGPAHWGPRGPHSNQKMPYDYQHRGPYPSHGSQYPPAYG 225

Query: 182  GYPSQQTAPRNNFNAGWDQRSGSMQTPQXXXXXXXXXXXXXXXXXAP--NPMPN------ 337
             YP Q  APR+N+++GW+QR  ++Q P                   P   PMP       
Sbjct: 226  DYP-QHMAPRSNYSSGWEQRPANVQGPHTHTSGYDYYSQGGHASDHPVSGPMPTPIPGPA 284

Query: 338  SGHVPASAHGAPPTHVTYNNXXXXXXXXXXXXXXSQSAPSQHSYGHGYEDPKYANQVPAQ 517
            S H PA   G PP+ V Y+               SQ+APS  SYGHGY++PKY       
Sbjct: 285  SRHSPAPVMGGPPSQVNYSYGQSHGPDYGHQAPYSQAAPSHQSYGHGYDEPKYPY----- 339

Query: 518  PAYGGHGNAQPGAYPQQVATQPGY-AQQPYSKPPTYGMPSQGPAPQSYGQPRASQPGDVP 694
                G+G++QP AY  Q   QPGY AQQ Y K P++GMPSQGP PQSYG PR  QPGD+ 
Sbjct: 340  ----GYGSSQP-AY-SQAGNQPGYGAQQQYGKQPSFGMPSQGPPPQSYGPPRPGQPGDMS 393

Query: 695  YQNPVSSAHSYGQTVPS--QQPYPYAASGPTQQAYPYGSAPPANDGYSQPPTHSAPAPVY 868
            YQ P+ S+  YG   P   QQ YPYA+SGP QQ YP   +   +DGY+Q  T S P   Y
Sbjct: 394  YQGPMQSSQLYGPNAPPPLQQQYPYASSGPMQQPYPSYGSGSGSDGYNQAQTASGPG--Y 451

Query: 869  PQPGGQPV-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQSAPNNANY-YQGPTDTG 1042
            PQ GGQPV                                 +Q A NNA Y YQG  D  
Sbjct: 452  PQQGGQPVPTPGQPGGQAAAGYAQGPAGGYGSYPSAQQGYPEQQAANNAGYGYQGSQDPA 511

Query: 1043 YSNAPTSAYGAPPSAQAGYVQQASSNQPAYEQPAAQSGGYPSVPGSAP-GFVKTLSPQPV 1219
            Y +AP  AYGAP S Q GY Q A + QP+Y+Q   QS GY + P +AP G+ KT+SPQP 
Sbjct: 512  YGSAP--AYGAPAS-QQGYAQPAPT-QPSYDQSVPQSAGYGAAPATAPVGYGKTVSPQPG 567

Query: 1220 YGQYDSTQMY 1249
            Y QYDSTQMY
Sbjct: 568  YPQYDSTQMY 577


>ref|XP_003537947.1| PREDICTED: uncharacterized protein LOC100786134 [Glycine max]
          Length = 794

 Score =  307 bits (786), Expect = 5e-81
 Identities = 195/436 (44%), Positives = 226/436 (51%), Gaps = 19/436 (4%)
 Frame = +2

Query: 2    PVKPSPLSGGYNQQAYRAR--GPGGPPQWGSRTHSASQATIYDNQQRGMYPSHNQ-YMPP 172
            PV+PS  SGG+ QQA+     G GGPPQWG R       T YD Q RG +P+HNQ Y P 
Sbjct: 367  PVRPS--SGGFGQQAHHPPRGGSGGPPQWGQRGSHFGHPTAYDYQHRGPFPAHNQPYAPA 424

Query: 173  AYGGYPSQQTAPRNNFNAGWDQR-SGSMQTP-------QXXXXXXXXXXXXXXXXXAPNP 328
             YG YP   T PR++F +GW+QR   S Q P       +                  P+ 
Sbjct: 425  PYGNYPQHMT-PRSSFGSGWEQRPHHSFQGPPPHNGGYEYYGGHGGHLSDAPPSTQLPSS 483

Query: 329  MP--NSGHVPASAHGAPPTHVTYNNXXXXXXXXXXXXXXSQSAPSQHSYGHGYEDPKYAN 502
             P   +G  P  + G  P  V YN               SQ+   Q  YG GY++ KY N
Sbjct: 484  APPYGAGPSPVPSMGPTPAQVNYNYGQPQGQDYGHQTTYSQAGLPQQGYGQGYDESKYEN 543

Query: 503  QVPAQPAYGGHGNAQPGAYPQQVATQPGY-AQQPYSKPPTYGMPSQGPAPQSYGQPRASQ 679
            + P Q +YGGH N+Q   YP Q   QP Y A Q + KPP YGMPS G  PQSYG PRA+Q
Sbjct: 544  RAPTQHSYGGHVNSQ-STYP-QAGAQPNYPAPQQFGKPPLYGMPS-GQPPQSYGPPRATQ 600

Query: 680  PGDVPYQNPVSSAHSYGQTVPSQQPYPYAASGPTQQAYP-YGSAPPANDGYSQPPTHSAP 856
            PGD+PYQ   + A SYG  +P+QQPYPYA SGP+Q AYP YGSA PA DGYS PP   A 
Sbjct: 601  PGDMPYQGS-TPAQSYGTNMPTQQPYPYAVSGPSQTAYPSYGSA-PATDGYSHPP--PAS 656

Query: 857  APVYPQPGGQPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQSAPNNANY-YQGPT 1033
             P Y QP  QP                                 +Q APNNA Y YQ P 
Sbjct: 657  FPPYTQPAAQPTYGQPAAQPAASYTQVGPTGYGSSYPSLQPSYPEQPAPNNAVYGYQAPQ 716

Query: 1034 DTGYSNAPTSAYG-APPSAQAGYVQQASSNQPAYEQPAAQSGGYPSVPGSAP-GFVKTLS 1207
            D GYS     AY  A PS Q GYV Q +  Q  YEQ   Q  GY +VP SAP  + KTLS
Sbjct: 717  DPGYSTGAAPAYSTAQPSGQPGYV-QPTPTQTGYEQSNTQPAGYAAVPASAPAAYGKTLS 775

Query: 1208 PQP-VYGQYDSTQMYG 1252
            PQP  Y QYDSTQ+YG
Sbjct: 776  PQPAAYPQYDSTQVYG 791


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