BLASTX nr result

ID: Coptis21_contig00005544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005544
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38671.3| unnamed protein product [Vitis vinifera]              112   3e-23
ref|XP_002263933.1| PREDICTED: uncharacterized protein LOC100257...   112   3e-23
ref|XP_002326614.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_003539702.1| PREDICTED: uncharacterized protein LOC100781...   103   2e-20
ref|XP_003533509.1| PREDICTED: uncharacterized protein LOC100812...   103   2e-20

>emb|CBI38671.3| unnamed protein product [Vitis vinifera]
          Length = 659

 Score =  112 bits (281), Expect = 3e-23
 Identities = 64/95 (67%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
 Frame = -2

Query: 281 EREKMKKGKEVLISPNPKNVETXXXXXXXXXXKDSSDSL--PIKRSSRNASSKYDFVKVK 108
           +R  MKK K V + PNP   E            D SDS   P++ S+RNASSKYDFVKVK
Sbjct: 208 QRRGMKKDKGVAV-PNPNTPEE-----------DISDSSLPPVRFSTRNASSKYDFVKVK 255

Query: 107 VWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKI 3
           VWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKI
Sbjct: 256 VWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKI 290


>ref|XP_002263933.1| PREDICTED: uncharacterized protein LOC100257148 [Vitis vinifera]
          Length = 483

 Score =  112 bits (281), Expect = 3e-23
 Identities = 64/95 (67%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
 Frame = -2

Query: 281 EREKMKKGKEVLISPNPKNVETXXXXXXXXXXKDSSDSL--PIKRSSRNASSKYDFVKVK 108
           +R  MKK K V + PNP   E            D SDS   P++ S+RNASSKYDFVKVK
Sbjct: 32  QRRGMKKDKGVAV-PNPNTPEE-----------DISDSSLPPVRFSTRNASSKYDFVKVK 79

Query: 107 VWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKI 3
           VWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKI
Sbjct: 80  VWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKI 114


>ref|XP_002326614.1| predicted protein [Populus trichocarpa] gi|222833936|gb|EEE72413.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score =  107 bits (267), Expect = 1e-21
 Identities = 63/97 (64%), Positives = 67/97 (69%), Gaps = 8/97 (8%)
 Frame = -2

Query: 269 MKKGKEVLISPNP--KNVETXXXXXXXXXXKDSS------DSLPIKRSSRNASSKYDFVK 114
           M KGKEV+IS +P   N  +           D S       S P   SSRNASSKYDFVK
Sbjct: 1   MSKGKEVVISTSPHYSNHNSGVEDDEEEDGFDHSGNNKRFSSFP-SFSSRNASSKYDFVK 59

Query: 113 VKVWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKI 3
           V+VWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKI
Sbjct: 60  VRVWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKI 96


>ref|XP_003539702.1| PREDICTED: uncharacterized protein LOC100781886 [Glycine max]
          Length = 446

 Score =  103 bits (258), Expect = 2e-20
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = -2

Query: 161 IKRSSRNASSKYDFVKVKVWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKI 3
           ++ SSRNASSKYDFVKVKVWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKI
Sbjct: 33  VRFSSRNASSKYDFVKVKVWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKI 85


>ref|XP_003533509.1| PREDICTED: uncharacterized protein LOC100812099 [Glycine max]
          Length = 448

 Score =  103 bits (258), Expect = 2e-20
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = -2

Query: 161 IKRSSRNASSKYDFVKVKVWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKI 3
           ++ SSRNASSKYDFVKVKVWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKI
Sbjct: 35  VRFSSRNASSKYDFVKVKVWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKI 87


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