BLASTX nr result

ID: Coptis21_contig00005518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005518
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFI98399.1| heat shock transcription factor A2 [Vitis vinifera]     55   5e-06
ref|XP_002278709.1| PREDICTED: heat shock factor protein HSF30-l...    55   5e-06

>gb|AFI98399.1| heat shock transcription factor A2 [Vitis vinifera]
          Length = 377

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
 Frame = +3

Query: 3   GRKRRLPASHGADNL--LFEAIDTTPFVNYTNQTEPEVVTVDSVIETLFSSSIDEELSNA 176
           GRKRRL  S  A+NL  +          +YTNQ + ++  ++S IET FS   D E S  
Sbjct: 236 GRKRRLTTSQSAENLQEVITVASIDQAFSYTNQDDGDMSGIESEIETFFSGGWDNESSED 295

Query: 177 FHDQEVHGTNDLDSGSATDITWENLLND 260
             D +     D + GS  D+ WE LL+D
Sbjct: 296 IKDPKADSI-DNNLGSVNDVIWEELLSD 322


>ref|XP_002278709.1| PREDICTED: heat shock factor protein HSF30-like [Vitis vinifera]
          Length = 388

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
 Frame = +3

Query: 3   GRKRRLPASHGADNL--LFEAIDTTPFVNYTNQTEPEVVTVDSVIETLFSSSIDEELSNA 176
           GRKRRL  S  A+NL  +          +YTNQ + ++  ++S IET FS   D E S  
Sbjct: 236 GRKRRLTTSQSAENLQEVITVASIDQAFSYTNQDDGDMSGIESEIETFFSGGWDNESSED 295

Query: 177 FHDQEVHGTNDLDSGSATDITWENLLND 260
             D +     D + GS  D+ WE LL+D
Sbjct: 296 IKDPKADSI-DNNLGSVNDVIWEELLSD 322


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