BLASTX nr result

ID: Coptis21_contig00005517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005517
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308527.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28
ref|XP_002282302.1| PREDICTED: PCI domain-containing protein 2 [...   126   2e-27
ref|XP_003542290.1| PREDICTED: PCI domain-containing protein 2-l...   126   2e-27
ref|XP_003549244.1| PREDICTED: PCI domain-containing protein 2-l...   124   6e-27
tpg|DAA61305.1| TPA: hypothetical protein ZEAMMB73_565062 [Zea m...   124   1e-26

>ref|XP_002308527.1| predicted protein [Populus trichocarpa] gi|222854503|gb|EEE92050.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  127 bits (319), Expect = 9e-28
 Identities = 58/69 (84%), Positives = 67/69 (97%)
 Frame = +2

Query: 2   YIIQKQKDPSKAHQVELDVIVKALRWLDLDMDVDEVECIMAILIYKNLVKGYFTHKSKVA 181
           YIIQKQ+DPSKAHQ++L+VIVKAL+WL++DMD+DEVECI+AILIYKNLVKGYF HKSKV 
Sbjct: 336 YIIQKQRDPSKAHQIKLEVIVKALKWLEIDMDLDEVECIVAILIYKNLVKGYFAHKSKVV 395

Query: 182 VLSKQDPFP 208
           VLSKQDPFP
Sbjct: 396 VLSKQDPFP 404


>ref|XP_002282302.1| PREDICTED: PCI domain-containing protein 2 [Vitis vinifera]
           gi|297738675|emb|CBI27920.3| unnamed protein product
           [Vitis vinifera]
          Length = 413

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/69 (84%), Positives = 66/69 (95%)
 Frame = +2

Query: 2   YIIQKQKDPSKAHQVELDVIVKALRWLDLDMDVDEVECIMAILIYKNLVKGYFTHKSKVA 181
           Y IQKQKDPSKAHQ++L+VIVKAL+WL++DMDVDEVECIM+ILIYKNL+KGYF HKSKV 
Sbjct: 336 YFIQKQKDPSKAHQLKLEVIVKALKWLEMDMDVDEVECIMSILIYKNLMKGYFAHKSKVV 395

Query: 182 VLSKQDPFP 208
           VLSKQDPFP
Sbjct: 396 VLSKQDPFP 404


>ref|XP_003542290.1| PREDICTED: PCI domain-containing protein 2-like [Glycine max]
          Length = 410

 Score =  126 bits (316), Expect = 2e-27
 Identities = 58/69 (84%), Positives = 66/69 (95%)
 Frame = +2

Query: 2   YIIQKQKDPSKAHQVELDVIVKALRWLDLDMDVDEVECIMAILIYKNLVKGYFTHKSKVA 181
           YIIQKQKDP +AHQV+L+VIVKAL+WL++DMDVDEVECI+AILIYKNL+KGYF HKSKV 
Sbjct: 333 YIIQKQKDPGRAHQVKLEVIVKALKWLEIDMDVDEVECIVAILIYKNLMKGYFAHKSKVV 392

Query: 182 VLSKQDPFP 208
           VLSKQDPFP
Sbjct: 393 VLSKQDPFP 401


>ref|XP_003549244.1| PREDICTED: PCI domain-containing protein 2-like [Glycine max]
          Length = 413

 Score =  124 bits (312), Expect = 6e-27
 Identities = 58/69 (84%), Positives = 66/69 (95%)
 Frame = +2

Query: 2   YIIQKQKDPSKAHQVELDVIVKALRWLDLDMDVDEVECIMAILIYKNLVKGYFTHKSKVA 181
           YIIQKQ+DPS+AHQV+L+VIVKAL+WL +DMDVDEVECI+AILIYKNL+KGYF HKSKV 
Sbjct: 336 YIIQKQRDPSRAHQVKLEVIVKALKWLVIDMDVDEVECIVAILIYKNLMKGYFAHKSKVV 395

Query: 182 VLSKQDPFP 208
           VLSKQDPFP
Sbjct: 396 VLSKQDPFP 404


>tpg|DAA61305.1| TPA: hypothetical protein ZEAMMB73_565062 [Zea mays]
          Length = 295

 Score =  124 bits (310), Expect = 1e-26
 Identities = 55/69 (79%), Positives = 66/69 (95%)
 Frame = +2

Query: 2   YIIQKQKDPSKAHQVELDVIVKALRWLDLDMDVDEVECIMAILIYKNLVKGYFTHKSKVA 181
           +IIQ+QK+P+KAHQ++LDV+VKAL+WL++DMDVDEVECIMA LIYKNL+KGYF HKSKV 
Sbjct: 220 HIIQRQKEPAKAHQIKLDVVVKALKWLEIDMDVDEVECIMACLIYKNLIKGYFAHKSKVL 279

Query: 182 VLSKQDPFP 208
           VLSKQDPFP
Sbjct: 280 VLSKQDPFP 288


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