BLASTX nr result

ID: Coptis21_contig00005498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005498
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549617.1| PREDICTED: uncharacterized protein LOC100781...    99   4e-19
ref|XP_003525508.1| PREDICTED: uncharacterized protein LOC100817...    94   1e-17
ref|XP_002511381.1| U3 small nucleolar ribonucleoprotein protein...    94   2e-17
ref|XP_002865060.1| hypothetical protein ARALYDRAFT_496951 [Arab...    91   1e-16
ref|XP_002321609.1| predicted protein [Populus trichocarpa] gi|2...    90   3e-16

>ref|XP_003549617.1| PREDICTED: uncharacterized protein LOC100781093 [Glycine max]
          Length = 516

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 47/78 (60%), Positives = 59/78 (75%)
 Frame = -1

Query: 234 NARYEDFFGGKKKKSVKRQSNIHNKSEDEEQEDDKGDHKQTKESLSTHEKELQKQHSKIE 55
           +ARYEDFFGGKK++  KR++ +  +SE  + EDD    KQTK + S HEK+L+K  SKIE
Sbjct: 223 SARYEDFFGGKKERGSKRKAQVLQESEYSDDEDDMEFDKQTKGTASAHEKQLEKIQSKIE 282

Query: 54  QMEKANLDPKAWTMQGEV 1
            MEKAN+DPK WTMQGEV
Sbjct: 283 LMEKANIDPKTWTMQGEV 300


>ref|XP_003525508.1| PREDICTED: uncharacterized protein LOC100817724 [Glycine max]
          Length = 547

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 48/78 (61%), Positives = 58/78 (74%)
 Frame = -1

Query: 234 NARYEDFFGGKKKKSVKRQSNIHNKSEDEEQEDDKGDHKQTKESLSTHEKELQKQHSKIE 55
           NARYEDFFGGKK++  KR++    +S D   EDD    KQTK + S HEK+L+K  SKIE
Sbjct: 237 NARYEDFFGGKKERGSKRKAQALQES-DYSDEDDMELDKQTKGTASAHEKQLEKIQSKIE 295

Query: 54  QMEKANLDPKAWTMQGEV 1
           QMEKAN++ KAWTMQGEV
Sbjct: 296 QMEKANIEQKAWTMQGEV 313


>ref|XP_002511381.1| U3 small nucleolar ribonucleoprotein protein mpp10, putative
           [Ricinus communis] gi|223550496|gb|EEF51983.1| U3 small
           nucleolar ribonucleoprotein protein mpp10, putative
           [Ricinus communis]
          Length = 533

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 45/81 (55%), Positives = 59/81 (72%)
 Frame = -1

Query: 243 KLGNARYEDFFGGKKKKSVKRQSNIHNKSEDEEQEDDKGDHKQTKESLSTHEKELQKQHS 64
           +LGNARYEDFFG KKK   KR+SN+     D+  ++D G   + +  LSTH+K+ +K  S
Sbjct: 229 ELGNARYEDFFGAKKKTDSKRKSNL-----DDGSDEDSGSEVEKEGDLSTHQKQREKLKS 283

Query: 63  KIEQMEKANLDPKAWTMQGEV 1
           +IEQMEKANL+PK WTM+GEV
Sbjct: 284 EIEQMEKANLEPKTWTMRGEV 304


>ref|XP_002865060.1| hypothetical protein ARALYDRAFT_496951 [Arabidopsis lyrata subsp.
           lyrata] gi|297310895|gb|EFH41319.1| hypothetical protein
           ARALYDRAFT_496951 [Arabidopsis lyrata subsp. lyrata]
          Length = 522

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 49/81 (60%), Positives = 57/81 (70%)
 Frame = -1

Query: 243 KLGNARYEDFFGGKKKKSVKRQSNIHNKSEDEEQEDDKGDHKQTKESLSTHEKELQKQHS 64
           KLG ARY+DFFGGKKK++  +  ++   SEDEE E +     Q  E LSTHEK   K  S
Sbjct: 237 KLGRARYDDFFGGKKKETKMKLKDL---SEDEEAEREN----QGNEKLSTHEKARLKLQS 289

Query: 63  KIEQMEKANLDPKAWTMQGEV 1
           KIEQMEKANLDPK WTMQGE+
Sbjct: 290 KIEQMEKANLDPKHWTMQGEI 310


>ref|XP_002321609.1| predicted protein [Populus trichocarpa] gi|222868605|gb|EEF05736.1|
           predicted protein [Populus trichocarpa]
          Length = 554

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 44/77 (57%), Positives = 58/77 (75%)
 Frame = -1

Query: 231 ARYEDFFGGKKKKSVKRQSNIHNKSEDEEQEDDKGDHKQTKESLSTHEKELQKQHSKIEQ 52
           ARYEDFFGGKK+K +K+++   + S+DE  ++   + K     LSTHEK+LQK  S+IEQ
Sbjct: 251 ARYEDFFGGKKRKILKKKTKEDSSSDDELDDEALNERKGR---LSTHEKQLQKLQSEIEQ 307

Query: 51  MEKANLDPKAWTMQGEV 1
           MEK+NL+PK WTMQGEV
Sbjct: 308 MEKSNLEPKTWTMQGEV 324


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