BLASTX nr result

ID: Coptis21_contig00005493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005493
         (1093 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278060.1| PREDICTED: probable receptor-like protein ki...   340   3e-91
ref|XP_002511899.1| ATP binding protein, putative [Ricinus commu...   337   4e-90
ref|XP_002320815.1| predicted protein [Populus trichocarpa] gi|2...   318   1e-84
emb|CBI40430.3| unnamed protein product [Vitis vinifera]              308   2e-81
ref|NP_001190642.1| fringe-related protein [Arabidopsis thaliana...   287   4e-75

>ref|XP_002278060.1| PREDICTED: probable receptor-like protein kinase At5g24010-like
            [Vitis vinifera]
          Length = 481

 Score =  340 bits (873), Expect = 3e-91
 Identities = 171/302 (56%), Positives = 222/302 (73%), Gaps = 4/302 (1%)
 Frame = -1

Query: 1084 SSFGYVNAIEVFSAPDRLIADTAMLVGFNGSEKINGLRNQGLETVYRLNVGGPKVTPFND 905
            S F +VNAIEV SAP  LIADTA  V  +  E  +GL  Q LE VYR+NVGGPKVTPFND
Sbjct: 176  SKFAFVNAIEVISAPKDLIADTAQFVNGDSVENFDGLTKQALEVVYRVNVGGPKVTPFND 235

Query: 904  TLWRTWIPDDGVLRMNETSMDIHFSGRIQYQEGGLSREIGPDNVYSSARVMSNLKR---N 734
            +LWRTW+PD+  L+ +E S  ++ SGRI+YQ GG SRE+ PDNVY+SARV+S+      N
Sbjct: 236  SLWRTWVPDEEFLKFSEGSSRVYTSGRIRYQMGGASREVCPDNVYNSARVISSSNATVPN 295

Query: 733  SNITWILPVSVGYKYLVRMHFCDIASLALNELYFNVYINGHLATENLDLSDIT-RMLASP 557
             NITW   V  GYKYLVRMHFCDIAS+A+  +YFNV+++GHL  +++DLS IT  +L+SP
Sbjct: 296  HNITWGFDVVEGYKYLVRMHFCDIASIAIGLIYFNVHVDGHLVYKDMDLSYITNEVLSSP 355

Query: 556  YYADFVVNANELGVISVSIAPSNLSSPERMNAILNGLEIMKMNNSMGSFDGKISVASILR 377
            +YADFVV+ +  GV++VS+ PS+ S P  ++ ILNG+EIMK+NNSMGS DG++SV  +L+
Sbjct: 356  FYADFVVDGDSSGVLTVSVGPSSKSFPYAVDGILNGVEIMKLNNSMGSLDGEVSVEQVLK 415

Query: 376  SRARGNNGVGVCSLAIISLLVAAFVVMHRRNAVAQDSVGWSPLPLDSSEGNLKYKNQSAL 197
            +  RGN GV V   A + LL+ A ++MHRR    +DSV WSPLP+D S+GNLK  NQ + 
Sbjct: 416  NWPRGNIGVSVALFASVCLLLTASLLMHRRRVGVKDSVAWSPLPMDISKGNLKSNNQFSC 475

Query: 196  RK 191
             K
Sbjct: 476  GK 477


>ref|XP_002511899.1| ATP binding protein, putative [Ricinus communis]
            gi|223549079|gb|EEF50568.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 476

 Score =  337 bits (863), Expect = 4e-90
 Identities = 166/296 (56%), Positives = 219/296 (73%), Gaps = 3/296 (1%)
 Frame = -1

Query: 1087 ESSFGYVNAIEVFSAPDRLIADTAMLVGFNGSEKINGLRNQGLETVYRLNVGGPKVTPFN 908
            +  FG+VNAIEV SAP  LIAD A  V    +EK +GL  Q LE +YR+NVGGPK+TPFN
Sbjct: 174  KGEFGFVNAIEVISAPKDLIADVATRVNGYKNEKFDGLNKQALEMLYRVNVGGPKITPFN 233

Query: 907  DTLWRTWIPDDGVLRMNETSMDIHFSGRIQYQEGGLSREIGPDNVYSSARVMSNLKR--- 737
            DT+WRTWIPDD    +N+ +  I+FSGRI Y+ GG SRE+GPD VY++ARV+++      
Sbjct: 234  DTVWRTWIPDDHFFELNKLATRIYFSGRINYRSGGASREVGPDFVYNTARVITSKNSSVL 293

Query: 736  NSNITWILPVSVGYKYLVRMHFCDIASLALNELYFNVYINGHLATENLDLSDITRMLASP 557
            N+N+TW+ PV  GY+YLVR+HFCDIAS++L  LYFNVYINGHLA ENLDL+ IT MLASP
Sbjct: 294  NANMTWVFPVIQGYQYLVRLHFCDIASMSLGLLYFNVYINGHLAFENLDLNTITYMLASP 353

Query: 556  YYADFVVNANELGVISVSIAPSNLSSPERMNAILNGLEIMKMNNSMGSFDGKISVASILR 377
             YADFVV+++  G + VSI  SN+S    ++ ILNG+EIMKMNNS+GS DG +    +LR
Sbjct: 354  VYADFVVDSDSNGALRVSIGRSNMSMAHTVDGILNGVEIMKMNNSVGSLDGNMCAGMVLR 413

Query: 376  SRARGNNGVGVCSLAIISLLVAAFVVMHRRNAVAQDSVGWSPLPLDSSEGNLKYKN 209
            S  R + GV V  +A++ +L++ +V+MHRR+  A+DS+ WS LP D+S+  LK+ N
Sbjct: 414  SWPREHIGVLVPLVAVVCVLLSVYVIMHRRSVDARDSIAWSKLPTDTSQVMLKHGN 469


>ref|XP_002320815.1| predicted protein [Populus trichocarpa] gi|222861588|gb|EEE99130.1|
            predicted protein [Populus trichocarpa]
          Length = 487

 Score =  318 bits (815), Expect = 1e-84
 Identities = 168/315 (53%), Positives = 216/315 (68%), Gaps = 9/315 (2%)
 Frame = -1

Query: 1087 ESSFGYVNAIEVFSAPDRLIADTAMLVGFNGSEKINGLRNQGLETVYRLNVGGPKVTPFN 908
            + ++G+VNAIEV SAP  LIAD   LV  N  EK  GL  Q LETV+R+NVGGPKVTPFN
Sbjct: 172  KGNYGFVNAIEVISAPKDLIADVGFLVNGNKDEKFVGLTKQALETVHRINVGGPKVTPFN 231

Query: 907  DTLWRTWIPDDGVLRM-NETSMDIHFSGRIQYQEGGLSREIGPDNVYSSARVMSNLKR-- 737
            DT+WRTWIPD   L+  N+ S  ++F GRI YQ GG SRE+GPD VY +ARV++N     
Sbjct: 232  DTVWRTWIPDYEFLKSSNDLSKRMYFGGRIHYQIGGASREVGPDFVYKTARVITNTNGSV 291

Query: 736  -NSNITWILPVSVGYKYLVRMHFCDIASLALNELYFNVYINGHLATENLDLSDITRMLAS 560
             N N+TW  PV  GYKYLVRMHFCDIAS++L  ++FNVY+NG+LA E+LDLS IT  LAS
Sbjct: 292  LNVNMTWEFPVDEGYKYLVRMHFCDIASISLGLIHFNVYVNGYLAYEDLDLSSITYTLAS 351

Query: 559  PYYADFVVNANELGVISVSIAPSNLSSPERMNAILNGLEIMKMNNSMGSFDGKISVASIL 380
            P+Y DFVV+ +  GV+ VS+ P+N +    ++ ILNG+EIMKMNNSMGS  GKI    +L
Sbjct: 352  PFYVDFVVDDDSSGVLRVSVGPTNKTMAYGVDGILNGVEIMKMNNSMGSLGGKICAGMVL 411

Query: 379  RSRARGNNGVGVCSLAIISLLVAAFVVMHRRNAVAQDSVGWSPLP-----LDSSEGNLKY 215
            +S  RGN GV V  +A + LL++  +VMHRR    ++ V WS LP     +D + GNL +
Sbjct: 412  KSWPRGNIGVLVPFVAGLCLLLSLALVMHRRTVGMRNPVSWSKLPTEVPGVDLNHGNLHF 471

Query: 214  KNQSALRKFLFF*II 170
               +     L+F I+
Sbjct: 472  SGCNIFNYLLYFAIL 486


>emb|CBI40430.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score =  308 bits (788), Expect = 2e-81
 Identities = 158/298 (53%), Positives = 213/298 (71%), Gaps = 4/298 (1%)
 Frame = -1

Query: 1030 IADTAMLVGFNGSEKINGLRNQGLETVYRLNVGGPKVTPFNDTLWRTWIPDDGVLRMNET 851
            ++D    V  NG   ++   ++ L  VYR+NVGGPKVTPFND+LWRTW+PD+  L+ +E 
Sbjct: 159  VSDALFHVSVNGFLVLSNFTDRNL-LVYRVNVGGPKVTPFNDSLWRTWVPDEEFLKFSEG 217

Query: 850  SMDIHFSGRIQYQEGGLSREIGPDNVYSSARVMSNLKR---NSNITWILPVSVGYKYLVR 680
            S  ++ SGRI+YQ GG SRE+ PDNVY+SARV+S+      N NITW   V  GYKYLVR
Sbjct: 218  SSRVYTSGRIRYQMGGASREVCPDNVYNSARVISSSNATVPNHNITWGFDVVEGYKYLVR 277

Query: 679  MHFCDIASLALNELYFNVYINGHLATENLDLSDITR-MLASPYYADFVVNANELGVISVS 503
            MHFCDIAS+A+  +YFNV+++GHL  +++DLS IT  +L+SP+YADFVV+ +  GV++VS
Sbjct: 278  MHFCDIASIAIGLIYFNVHVDGHLVYKDMDLSYITNEVLSSPFYADFVVDGDSSGVLTVS 337

Query: 502  IAPSNLSSPERMNAILNGLEIMKMNNSMGSFDGKISVASILRSRARGNNGVGVCSLAIIS 323
            + PS+ S P  ++ ILNG+EIMK+NNSMGS DG++SV  +L++  RGN GV V   A + 
Sbjct: 338  VGPSSKSFPYAVDGILNGVEIMKLNNSMGSLDGEVSVEQVLKNWPRGNIGVSVALFASVC 397

Query: 322  LLVAAFVVMHRRNAVAQDSVGWSPLPLDSSEGNLKYKNQSALRKFLFF*IIN*YLYYV 149
            LL+ A ++MHRR    +DSV WSPLP+D S+GNLK  NQ +  K   F  +N  LYYV
Sbjct: 398  LLLTASLLMHRRRVGVKDSVAWSPLPMDISKGNLKSNNQFSCGKSAVFFFLN-TLYYV 454


>ref|NP_001190642.1| fringe-related protein [Arabidopsis thaliana]
            gi|110737285|dbj|BAF00589.1| hypothetical protein
            [Arabidopsis thaliana] gi|332656452|gb|AEE81852.1|
            fringe-related protein [Arabidopsis thaliana]
          Length = 478

 Score =  287 bits (734), Expect = 4e-75
 Identities = 158/310 (50%), Positives = 209/310 (67%), Gaps = 11/310 (3%)
 Frame = -1

Query: 1087 ESSFGYVNAIEVFSAPDRLIADTAMLVGFNGSEKINGLRNQGLETVYRLNVGGPKVTPFN 908
            +S+F +VNAIEV SAP  LI D A  V  +G+EK NGL  Q +E VYR+NVGG KVTPFN
Sbjct: 170  DSNFAFVNAIEVISAPKDLIGDVATSVSHDGTEKFNGLAKQAMEVVYRVNVGGRKVTPFN 229

Query: 907  DTLWRTWIPDDGVLRMNETSMD-IHFSGRIQYQEGGLSREIGPDNVYSSARVMSNLKRNS 731
            DTLWRTW+ D+G L+  + S +  +F+GRI+Y+ GG SRE+GPDNVY++ARV        
Sbjct: 230  DTLWRTWVTDEGFLKTGDGSSEKSYFTGRIKYRRGGASREVGPDNVYNTARVGKRSNGLV 289

Query: 730  NITWILPVSVGYKYLVRMHFCDIASLALNELYFNVYINGHLATENLDLS-DITRMLASPY 554
            +++W   V+VGYKYL+RMHFCDIAS +L  LYFNVYING+LA E+ D+S     +LASPY
Sbjct: 290  DMSWGFKVNVGYKYLIRMHFCDIASKSLGRLYFNVYINGNLAYEDFDISYAADNVLASPY 349

Query: 553  YADFVVNA-----NELG-VISVSIAPSNLSSPE--RMNAILNGLEIMKMNNSMGSFDGKI 398
            Y DFVV+A     N  G  I+VS+ PSN +S +   ++AILNG+EIMKMNNSMGS DG +
Sbjct: 350  YIDFVVDATADDNNPSGSSITVSVGPSNKTSVDGNGVDAILNGVEIMKMNNSMGSLDGYV 409

Query: 397  SVASILRS-RARGNNGVGVCSLAIISLLVAAFVVMHRRNAVAQDSVGWSPLPLDSSEGNL 221
            S   IL +   R N  + +  LA + + ++ ++V  R+    +D  GW+ L +D  E N 
Sbjct: 410  STEMILSTCPNRRNLSIFIAMLAFMCIFMSFYIVTQRKR--VKDQYGWTKLSMDVLEDNS 467

Query: 220  KYKNQSALRK 191
            K  NQ   RK
Sbjct: 468  KSGNQFTARK 477


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