BLASTX nr result

ID: Coptis21_contig00005490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005490
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135061.1| PREDICTED: probable ribose-5-phosphate isome...    79   4e-13
ref|XP_002284079.1| PREDICTED: probable ribose-5-phosphate isome...    79   5e-13
ref|XP_003555942.1| PREDICTED: probable ribose-5-phosphate isome...    77   1e-12
ref|XP_002282058.2| PREDICTED: probable ribose-5-phosphate isome...    77   2e-12
emb|CBI16263.3| unnamed protein product [Vitis vinifera]               77   2e-12

>ref|XP_004135061.1| PREDICTED: probable ribose-5-phosphate isomerase-like [Cucumis
           sativus] gi|449493428|ref|XP_004159286.1| PREDICTED:
           probable ribose-5-phosphate isomerase-like [Cucumis
           sativus]
          Length = 275

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/56 (73%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
 Frame = -1

Query: 468 KLRVC-EKNVPFVTDNNNYIVNLFFEGAIGDLNAASDEILRLPGVVEHGMFLNMAT 304
           KLR   E   PFVTDN NYIV+L+F+  IGDLN ASDEILRL GVVEHGMFL MAT
Sbjct: 205 KLRTSGESGEPFVTDNGNYIVDLYFKEDIGDLNVASDEILRLAGVVEHGMFLGMAT 260


>ref|XP_002284079.1| PREDICTED: probable ribose-5-phosphate isomerase-like [Vitis
           vinifera]
          Length = 269

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/55 (69%), Positives = 42/55 (76%)
 Frame = -1

Query: 468 KLRVCEKNVPFVTDNNNYIVNLFFEGAIGDLNAASDEILRLPGVVEHGMFLNMAT 304
           KLR  E   PFVTDN NY+V+L+F+  IGDL  ASD ILRL GVVEHGMFL MAT
Sbjct: 200 KLRTYENGEPFVTDNRNYVVDLYFKREIGDLKVASDAILRLAGVVEHGMFLGMAT 254


>ref|XP_003555942.1| PREDICTED: probable ribose-5-phosphate isomerase-like [Glycine max]
          Length = 265

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/56 (69%), Positives = 47/56 (83%), Gaps = 1/56 (1%)
 Frame = -1

Query: 468 KLRV-CEKNVPFVTDNNNYIVNLFFEGAIGDLNAASDEILRLPGVVEHGMFLNMAT 304
           KLR   EK+ P+VTDN N+IV+L+FE +IGDL AASD IL+L GVVEHGMFL+MAT
Sbjct: 195 KLRTFAEKDEPYVTDNGNFIVDLYFERSIGDLKAASDAILQLAGVVEHGMFLDMAT 250


>ref|XP_002282058.2| PREDICTED: probable ribose-5-phosphate isomerase-like [Vitis
           vinifera]
          Length = 345

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/55 (67%), Positives = 43/55 (78%)
 Frame = -1

Query: 468 KLRVCEKNVPFVTDNNNYIVNLFFEGAIGDLNAASDEILRLPGVVEHGMFLNMAT 304
           KLR  +   PFVTDN NYIV+L+F+  IGDL  ASD ILRL GVVEHGMF++MAT
Sbjct: 200 KLRTYQNGEPFVTDNMNYIVDLYFKREIGDLKVASDAILRLAGVVEHGMFIDMAT 254


>emb|CBI16263.3| unnamed protein product [Vitis vinifera]
          Length = 322

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/55 (67%), Positives = 43/55 (78%)
 Frame = -1

Query: 468 KLRVCEKNVPFVTDNNNYIVNLFFEGAIGDLNAASDEILRLPGVVEHGMFLNMAT 304
           KLR  +   PFVTDN NYIV+L+F+  IGDL  ASD ILRL GVVEHGMF++MAT
Sbjct: 218 KLRTYQNGEPFVTDNMNYIVDLYFKREIGDLKVASDAILRLAGVVEHGMFIDMAT 272


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