BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005489
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA40429.1| unknown [Solanum tuberosum]                            207   3e-51
ref|XP_002511394.1| 50S ribosomal protein L7/L12, putative [Rici...   206   5e-51
ref|XP_002282612.1| PREDICTED: 50S ribosomal protein L12, chloro...   202   8e-50
ref|XP_004170687.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...   197   4e-48
ref|XP_004152013.1| PREDICTED: 50S ribosomal protein L12, chloro...   196   6e-48

>gb|ABA40429.1| unknown [Solanum tuberosum]
          Length = 194

 Score =  207 bits (527), Expect = 3e-51
 Identities = 124/194 (63%), Positives = 137/194 (70%), Gaps = 5/194 (2%)
 Frame = -3

Query: 874 MKLLAFLRTVHXXXXXXXXXXXLQYRLFQPDFVPRDPMVKPKRXXXXXXXXXXXXXXXPS 695
           MKL+A LR +            LQ R FQPDFVPRDP  KP R               PS
Sbjct: 1   MKLIARLRPIQTCTALREIIGPLQSRSFQPDFVPRDPNAKPIRYKYPAAYDPYGPRPPPS 60

Query: 694 DKVVQLAERIAALPLEECIQIFPALRHRLLQPEI-QISTEGMDLDSQGGS----AMAEEE 530
           DK+VQLAERIAAL  EE  QI P LR  L  P + QIS EGMDL + GG+    A AEE+
Sbjct: 61  DKIVQLAERIAALAPEERRQIGPLLREILRHPNLKQISVEGMDLGAIGGAGGGPAKAEEK 120

Query: 529 KPEKTAFDVKLEKYDAASKIKVIKEVRAFTSLGLKEAKDLVEKAPVLLKQGVTKEEANEI 350
           K EKTAFDVKLEK+DAA+KIKVIKEVR+FTSLGLKEAK+LVEKAP +LKQGVTKEEANEI
Sbjct: 121 KVEKTAFDVKLEKFDAAAKIKVIKEVRSFTSLGLKEAKELVEKAPAILKQGVTKEEANEI 180

Query: 349 IEKLKAVGGAAVME 308
           IEK+KAVGG AVME
Sbjct: 181 IEKIKAVGGVAVME 194


>ref|XP_002511394.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
           gi|223550509|gb|EEF51996.1| 50S ribosomal protein
           L7/L12, putative [Ricinus communis]
          Length = 193

 Score =  206 bits (525), Expect = 5e-51
 Identities = 118/193 (61%), Positives = 136/193 (70%), Gaps = 4/193 (2%)
 Frame = -3

Query: 874 MKLLAFLRTVHXXXXXXXXXXXLQYRLFQPDFVPRDPMVKPKRXXXXXXXXXXXXXXXPS 695
           MK +  LR+V            LQ R FQ DFVPRDP + P++               PS
Sbjct: 1   MKFVPLLRSVSTRYTLREITGPLQVRFFQHDFVPRDPKINPRKYKYPAFYDPYGPRPPPS 60

Query: 694 DKVVQLAERIAALPLEECIQIFPALRHRLLQPEIQ-ISTEGMDLDSQGGSAMAE---EEK 527
           DK+VQLAERIAALP EE  QI P L ++L  P++Q ISTEGMDL +QG  A      EEK
Sbjct: 61  DKIVQLAERIAALPPEERRQIGPTLHYKLNHPKLQTISTEGMDLGAQGSQAAVAAKVEEK 120

Query: 526 PEKTAFDVKLEKYDAASKIKVIKEVRAFTSLGLKEAKDLVEKAPVLLKQGVTKEEANEII 347
            EKTAFDVKLEK+DAA+KIKVIKEVRAFT+LGLKEAKDLVEKAP +LKQGVTKEEAN+II
Sbjct: 121 KEKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKAPAVLKQGVTKEEANDII 180

Query: 346 EKLKAVGGAAVME 308
           EK+KA GG A+ME
Sbjct: 181 EKIKAAGGVAIME 193


>ref|XP_002282612.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Vitis
           vinifera]
          Length = 193

 Score =  202 bits (515), Expect = 8e-50
 Identities = 119/193 (61%), Positives = 136/193 (70%), Gaps = 4/193 (2%)
 Frame = -3

Query: 874 MKLLAFLRTVHXXXXXXXXXXXLQYRLFQPDFVPRDPMVKPKRXXXXXXXXXXXXXXXPS 695
           MK  A ++TV            LQ R FQ DFVPR+P  KPKR               PS
Sbjct: 1   MKFTALVKTVRVHPTLPKIIGPLQSRFFQHDFVPREPNAKPKRYKYPPFYDPYGPKPPPS 60

Query: 694 DKVVQLAERIAALPLEECIQIFPALRHRLLQPEIQ-ISTEGMDLDSQGGSAMAE---EEK 527
           +KVV LAERIAAL  EE +QI P L+ RL  P+ Q ISTEGM+L SQGG+A      EEK
Sbjct: 61  EKVVGLAERIAALAPEERLQIGPMLKDRLSLPKTQVISTEGMELGSQGGAAAGAGKVEEK 120

Query: 526 PEKTAFDVKLEKYDAASKIKVIKEVRAFTSLGLKEAKDLVEKAPVLLKQGVTKEEANEII 347
            EKTAFDVKLEK++AA+KIKVIKEVRAFTSLGLKEAKDLVEK PV++KQG+TKEEAN+II
Sbjct: 121 VEKTAFDVKLEKFEAAAKIKVIKEVRAFTSLGLKEAKDLVEKVPVVIKQGITKEEANDII 180

Query: 346 EKLKAVGGAAVME 308
           EK+KA GG AVME
Sbjct: 181 EKIKAAGGVAVME 193


>ref|XP_004170687.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L12,
           chloroplastic-like [Cucumis sativus]
          Length = 193

 Score =  197 bits (500), Expect = 4e-48
 Identities = 110/193 (56%), Positives = 129/193 (66%), Gaps = 4/193 (2%)
 Frame = -3

Query: 874 MKLLAFLRTVHXXXXXXXXXXXLQYRLFQPDFVPRDPMVKPKRXXXXXXXXXXXXXXXPS 695
           MKL    +++             Q R FQPDF PRDP  KPK+               PS
Sbjct: 1   MKLTVVAQSLQVRSTFAKIIGLSQVRFFQPDFTPRDPNAKPKKYKYPAFYDPYGPRPPPS 60

Query: 694 DKVVQLAERIAALPLEECIQIFPALRHRLLQPEIQ-ISTEGMDLDSQGGSAMAE---EEK 527
           DK+++LAERI ALP  E  QI P L  +L  P++Q IS +G+D+  +GG+A      EEK
Sbjct: 61  DKIIELAERIVALPAAERCQIGPTLXRKLRHPKLQEISVDGLDMGPEGGAAAGSSNVEEK 120

Query: 526 PEKTAFDVKLEKYDAASKIKVIKEVRAFTSLGLKEAKDLVEKAPVLLKQGVTKEEANEII 347
            EKTAFDVKLEK+DAASKIKVIKEVRAFT+LGLKEAKDLVEK P +LKQGVTKEEAN II
Sbjct: 121 KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII 180

Query: 346 EKLKAVGGAAVME 308
           EK+KA GG AVME
Sbjct: 181 EKIKAAGGVAVME 193


>ref|XP_004152013.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Cucumis
           sativus]
          Length = 193

 Score =  196 bits (499), Expect = 6e-48
 Identities = 110/193 (56%), Positives = 129/193 (66%), Gaps = 4/193 (2%)
 Frame = -3

Query: 874 MKLLAFLRTVHXXXXXXXXXXXLQYRLFQPDFVPRDPMVKPKRXXXXXXXXXXXXXXXPS 695
           MKL    +++             Q R FQPDF PRDP  KPK+               PS
Sbjct: 1   MKLTVVAQSLQVRSTFAKIIGLSQVRFFQPDFTPRDPNAKPKKYKYPAFYDPYGPRPPPS 60

Query: 694 DKVVQLAERIAALPLEECIQIFPALRHRLLQPEIQ-ISTEGMDLDSQGGSAMAE---EEK 527
           DK+++LAERI ALP  E  QI P L  +L  P++Q IS +G+D+  +GG+A      EEK
Sbjct: 61  DKIIELAERIVALPAAERCQIGPTLGEKLRHPKLQEISVDGLDMGPEGGAAAGSSNVEEK 120

Query: 526 PEKTAFDVKLEKYDAASKIKVIKEVRAFTSLGLKEAKDLVEKAPVLLKQGVTKEEANEII 347
            EKTAFDVKLEK+DAASKIKVIKEVRAFT+LGLKEAKDLVEK P +LKQGVTKEEAN II
Sbjct: 121 KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII 180

Query: 346 EKLKAVGGAAVME 308
           EK+KA GG AVME
Sbjct: 181 EKIKAAGGVAVME 193