BLASTX nr result
ID: Coptis21_contig00005483
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00005483 (1990 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kD... 941 0.0 ref|XP_002530328.1| signal recognition particle protein, putativ... 915 0.0 ref|XP_004143384.1| PREDICTED: signal recognition particle 54 kD... 911 0.0 ref|XP_002322825.1| predicted protein [Populus trichocarpa] gi|2... 889 0.0 ref|XP_003554443.1| PREDICTED: signal recognition particle 54 kD... 885 0.0 >ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kDa protein, chloroplastic-like [Vitis vinifera] gi|297740127|emb|CBI30309.3| unnamed protein product [Vitis vinifera] Length = 567 Score = 941 bits (2433), Expect = 0.0 Identities = 487/568 (85%), Positives = 528/568 (92%) Frame = -1 Query: 1972 MEAIPYSTVISRHFSSLPSTRTLFTSKPTTSNSTKLFSSWAGSSLSVHHSSRNHFTREIW 1793 MEA+P+STV SR FSS ++ +L T K + ST SW S L + SSRN FTRE+W Sbjct: 1 MEAVPFSTVASRPFSS--TSPSLSTPKSLSRRSTNTRCSWTASKLPLPLSSRNPFTREVW 58 Query: 1792 SWVQMKRVTVRREMRGVVRAEMFGQLTSGLESAWNKLKGEEVLTKENIVEPMKEIRRALL 1613 S V+ K V+VRR+M GV+RAEMFGQLTSGLE+AW KLKGEEVLTKENIVEPM++IRRALL Sbjct: 59 SLVKSKSVSVRRQMPGVIRAEMFGQLTSGLEAAWTKLKGEEVLTKENIVEPMRDIRRALL 118 Query: 1612 EADVSLPVARRFVQTVSEQAVGVGLIRGVKPDQQLVKIVRDELVKLMGGEVSELVFAKSG 1433 EADVSLPV RRFVQ VSEQAVGVGLIRGVKPDQQLVKIV DELVKLMGGEVSELVFAKSG Sbjct: 119 EADVSLPVVRRFVQAVSEQAVGVGLIRGVKPDQQLVKIVHDELVKLMGGEVSELVFAKSG 178 Query: 1432 PTIILLAGLQGVGKTTVCAKLAFYLKKQGKSCMLVAADIYRPAAIDQLVILGEQVNVPVY 1253 PT+ILLAGLQGVGKTTVCAKLAFYLKKQGKSCMLVA D+YRPAAIDQLVILGEQV+VPVY Sbjct: 179 PTVILLAGLQGVGKTTVCAKLAFYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVDVPVY 238 Query: 1252 TAGTEVKPADIARQGLQEAKKKNADVVIVDTAGRLQIDKGMMDELKEVKRALNPTEVLLV 1073 TAGTEVKP+ IA+QGL+EA+KKN DVVIVDTAGRLQIDK MMDELK+VKRA+NPTEVLLV Sbjct: 239 TAGTEVKPSQIAKQGLEEARKKNIDVVIVDTAGRLQIDKAMMDELKDVKRAINPTEVLLV 298 Query: 1072 VDAMTGQEAAGLVTAFNLEIGITGAILTKLDGDSRGGAALSVKEVSGRPIKLVGRGERME 893 VDAMTGQEAA LVT FN+EIGITGAILTKLDGDSRGGAALSVKEVSG+PIKLVGRGERME Sbjct: 299 VDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERME 358 Query: 892 DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRKEDAEELQKKIMSTKFDFNDFLKQTRTV 713 DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMR+EDAEELQKKIMS KFDFNDFLKQTR V Sbjct: 359 DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSAKFDFNDFLKQTRAV 418 Query: 712 AQMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMEGMIEAMTPEERENPELLAESPVRRK 533 A+MGSMTRVLGMIPGMGKVTPAQIREAEKSLK+MEGMIEAMTPEERE PELLAESPVRRK Sbjct: 419 ARMGSMTRVLGMIPGMGKVTPAQIREAEKSLKMMEGMIEAMTPEEREKPELLAESPVRRK 478 Query: 532 RVAKDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMQGGSIPALNNLEESLKAEQKAPPGTA 353 RVA+DSGKTEQQVSQLVAQLFQMRVRMKNLMGVM+GGSIPAL+NLEE+LK+EQKAPPGTA Sbjct: 479 RVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALSNLEETLKSEQKAPPGTA 538 Query: 352 RRKRKSESRRQFADSAAARPSPRGFGTK 269 RRKR+SESR+QFA+ A++RPSPRGFG++ Sbjct: 539 RRKRRSESRKQFAEPASSRPSPRGFGSR 566 >ref|XP_002530328.1| signal recognition particle protein, putative [Ricinus communis] gi|223530132|gb|EEF32044.1| signal recognition particle protein, putative [Ricinus communis] Length = 572 Score = 915 bits (2365), Expect = 0.0 Identities = 476/570 (83%), Positives = 515/570 (90%), Gaps = 3/570 (0%) Frame = -1 Query: 1972 MEAIPYSTVISRHFSSLPSTRTLFTSKPTTSNSTKLFSSWAGSSLSVHH-SSRNHFTREI 1796 MEA+ STV SRHFS+ T T+ SN K SSW G S +V SSRN FTREI Sbjct: 1 MEAVQLSTVASRHFSTTSLTLANTTTNLKLSNCNKFRSSWTGCSGTVASLSSRNLFTREI 60 Query: 1795 WSWVQMKR--VTVRREMRGVVRAEMFGQLTSGLESAWNKLKGEEVLTKENIVEPMKEIRR 1622 W WV K VT+RR+ V+AEMFGQLT+GLESAW+KLKG E LTKENI EPM+++RR Sbjct: 61 WRWVNCKSSVVTLRRDFHSAVKAEMFGQLTTGLESAWSKLKGAETLTKENIAEPMRDMRR 120 Query: 1621 ALLEADVSLPVARRFVQTVSEQAVGVGLIRGVKPDQQLVKIVRDELVKLMGGEVSELVFA 1442 ALLEADVSLPV RRFVQ+V+++A+GVGLIRGVKPDQQLVKIV DELVKLMGGEVSELVFA Sbjct: 121 ALLEADVSLPVVRRFVQSVTDEAIGVGLIRGVKPDQQLVKIVHDELVKLMGGEVSELVFA 180 Query: 1441 KSGPTIILLAGLQGVGKTTVCAKLAFYLKKQGKSCMLVAADIYRPAAIDQLVILGEQVNV 1262 K PT+ILLAGLQGVGKTTVCAKLA YLKKQGKSCMLVA D+YRPAAIDQLVILGEQV V Sbjct: 181 KYSPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGV 240 Query: 1261 PVYTAGTEVKPADIARQGLQEAKKKNADVVIVDTAGRLQIDKGMMDELKEVKRALNPTEV 1082 PVYT GTEVKP++IA++GL+EAKKKN DVVIVDTAGRLQIDKGMMDELKEVKR LNPTEV Sbjct: 241 PVYTEGTEVKPSEIAKRGLEEAKKKNIDVVIVDTAGRLQIDKGMMDELKEVKRVLNPTEV 300 Query: 1081 LLVVDAMTGQEAAGLVTAFNLEIGITGAILTKLDGDSRGGAALSVKEVSGRPIKLVGRGE 902 LLVVDAMTGQEAA LVT FNLEIGITGAILTKLDGDSRGGAALSVKEVSG+PIKLVGRGE Sbjct: 301 LLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGE 360 Query: 901 RMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRKEDAEELQKKIMSTKFDFNDFLKQT 722 RMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMR+EDAE+LQKKIMS KFDFNDFLKQT Sbjct: 361 RMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSAKFDFNDFLKQT 420 Query: 721 RTVAQMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMEGMIEAMTPEERENPELLAESPV 542 R VA+MGSMTRV+GMIPGMGKVTPAQIREAEKSLKIME MIEAMTPEERE PELLAESP Sbjct: 421 RAVARMGSMTRVIGMIPGMGKVTPAQIREAEKSLKIMESMIEAMTPEEREKPELLAESPT 480 Query: 541 RRKRVAKDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMQGGSIPALNNLEESLKAEQKAPP 362 RRKR+A+DSGKTEQQVSQLVAQLFQMRVRMKNLMGVM+GGSIPAL+NLE++LKAEQKAPP Sbjct: 481 RRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALSNLEDALKAEQKAPP 540 Query: 361 GTARRKRKSESRRQFADSAAARPSPRGFGT 272 GTARRKR+SESRRQFADSA++RPSPRGFG+ Sbjct: 541 GTARRKRRSESRRQFADSASSRPSPRGFGS 570 >ref|XP_004143384.1| PREDICTED: signal recognition particle 54 kDa protein, chloroplastic-like [Cucumis sativus] gi|449482550|ref|XP_004156318.1| PREDICTED: signal recognition particle 54 kDa protein, chloroplastic-like [Cucumis sativus] Length = 572 Score = 911 bits (2354), Expect = 0.0 Identities = 474/571 (83%), Positives = 513/571 (89%), Gaps = 4/571 (0%) Frame = -1 Query: 1972 MEAIPYSTVISRHFSSLP----STRTLFTSKPTTSNSTKLFSSWAGSSLSVHHSSRNHFT 1805 ME + STV SRH +S ++R L ++ + SSW GSS SSRN FT Sbjct: 1 MEGLQISTVASRHLTSNSQSHCASRGLCHGSNCARKTSSISSSWLGSSNLKSLSSRNLFT 60 Query: 1804 REIWSWVQMKRVTVRREMRGVVRAEMFGQLTSGLESAWNKLKGEEVLTKENIVEPMKEIR 1625 REIW W+ K V RR+MRGVVRAEMFGQLTSGLE+AWNKLKGEEVL+KENIVEPM++IR Sbjct: 61 REIWGWLHAKTVNTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIR 120 Query: 1624 RALLEADVSLPVARRFVQTVSEQAVGVGLIRGVKPDQQLVKIVRDELVKLMGGEVSELVF 1445 RALLEADVSLPV RRFVQ VS+QAVGVG+IRGV+PDQQLVKIV DELVKLMGGEVSELVF Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180 Query: 1444 AKSGPTIILLAGLQGVGKTTVCAKLAFYLKKQGKSCMLVAADIYRPAAIDQLVILGEQVN 1265 +KSGPT+ILLAGLQGVGKTTVCAKLA YLKKQGKSCMLVA D+YRPAAIDQLVILGEQV Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240 Query: 1264 VPVYTAGTEVKPADIARQGLQEAKKKNADVVIVDTAGRLQIDKGMMDELKEVKRALNPTE 1085 VPVYTAGTEVKP+DIA+QGLQEA+K DVVIVDTAGRLQID+ MMDELKEVKR +NPTE Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDRAMMDELKEVKRVINPTE 300 Query: 1084 VLLVVDAMTGQEAAGLVTAFNLEIGITGAILTKLDGDSRGGAALSVKEVSGRPIKLVGRG 905 VLLVVDAMTGQEAA LVT FN+EIGITGAILTKLDGDSRGGAALSVKEVSG+PIKLVGRG Sbjct: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360 Query: 904 ERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRKEDAEELQKKIMSTKFDFNDFLKQ 725 ERM+DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMR+EDAEELQKKI+S KFDFNDFLKQ Sbjct: 361 ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ 420 Query: 724 TRTVAQMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMEGMIEAMTPEERENPELLAESP 545 TR VA+MGSMTRV+GMIPGMGKVTPAQ+REAEKSLKIME MIEAMTPEERE PELLAESP Sbjct: 421 TRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEEREKPELLAESP 480 Query: 544 VRRKRVAKDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMQGGSIPALNNLEESLKAEQKAP 365 RRKRVA+DSGKTEQQVSQLVAQLFQMRVRMKNLMGVM+GGSIPALNNLEE+LKAEQKAP Sbjct: 481 ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540 Query: 364 PGTARRKRKSESRRQFADSAAARPSPRGFGT 272 PGTARRKR+SESR+QFA+S R SPRGFG+ Sbjct: 541 PGTARRKRRSESRKQFANS-ETRSSPRGFGS 570 >ref|XP_002322825.1| predicted protein [Populus trichocarpa] gi|222867455|gb|EEF04586.1| predicted protein [Populus trichocarpa] Length = 576 Score = 889 bits (2297), Expect = 0.0 Identities = 471/575 (81%), Positives = 512/575 (89%), Gaps = 8/575 (1%) Frame = -1 Query: 1972 MEAIPYSTVISRHFSSLPS----TRTLFTSKPTTSNSTKLF-SSWAGSSLSVHH-SSRNH 1811 MEA+ STV SRHFS+ PS +TL STK F SSW GSS +V SSRN Sbjct: 1 MEAVQLSTVASRHFST-PSLSKNNKTLSYYSSCPGCSTKSFCSSWTGSSNNVTSLSSRNS 59 Query: 1810 FTREIWSWVQMKRV-TVRREMRG-VVRAEMFGQLTSGLESAWNKLKGEEVLTKENIVEPM 1637 FT+E+W WV K V T RREM G VV+AEMFGQLTSGLESAWNKLKGEEVLTKENIVEPM Sbjct: 60 FTKEMWRWVTCKSVVTFRREMGGGVVKAEMFGQLTSGLESAWNKLKGEEVLTKENIVEPM 119 Query: 1636 KEIRRALLEADVSLPVARRFVQTVSEQAVGVGLIRGVKPDQQLVKIVRDELVKLMGGEVS 1457 ++IRRALLEADVSLPV RRFVQ+VS+QAVGVGL+RGVKPDQQLVKIV DELVKLMGGEVS Sbjct: 120 RDIRRALLEADVSLPVVRRFVQSVSDQAVGVGLVRGVKPDQQLVKIVHDELVKLMGGEVS 179 Query: 1456 ELVFAKSGPTIILLAGLQGVGKTTVCAKLAFYLKKQGKSCMLVAADIYRPAAIDQLVILG 1277 ELVFAKS PT+ILLAGLQGVGKTTVCAKLA YLKKQGKSCML+A D+YRPAAIDQLVILG Sbjct: 180 ELVFAKSAPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLIAGDVYRPAAIDQLVILG 239 Query: 1276 EQVNVPVYTAGTEVKPADIARQGLQEAKKKNADVVIVDTAGRLQIDKGMMDELKEVKRAL 1097 EQV VPVYT GT+VKP++IAR+GL EAKKKN DVVIVDTAGRLQIDKGMMDELK+VK L Sbjct: 240 EQVGVPVYTEGTDVKPSEIARKGLSEAKKKNIDVVIVDTAGRLQIDKGMMDELKDVKLIL 299 Query: 1096 NPTEVLLVVDAMTGQEAAGLVTAFNLEIGITGAILTKLDGDSRGGAALSVKEVSGRPIKL 917 NPTEVLLVVDAMTGQEAA LVT FNLEIGITGAILTKLDGDSRGGAALSVKEVSG+PIKL Sbjct: 300 NPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKL 359 Query: 916 VGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRKEDAEELQKKIMSTKFDFND 737 VGRGERMEDLEPFYP+RMAGRILGMGDVLSFVEKAQEVMR+EDAEELQKKIMS FDFND Sbjct: 360 VGRGERMEDLEPFYPNRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSANFDFND 419 Query: 736 FLKQTRTVAQMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMEGMIEAMTPEERENPELL 557 FLKQTR VA+MGSMTRV+GMIPGM KVTP Q+REAEK+LKIME MIE MTPEERE PELL Sbjct: 420 FLKQTRAVAKMGSMTRVIGMIPGMAKVTPGQVREAEKNLKIMEAMIEVMTPEEREKPELL 479 Query: 556 AESPVRRKRVAKDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMQGGSIPALNNLEESLKAE 377 AESP RRKRVA+ SGKTEQQVSQLVAQLFQMRVRMKNLMGVM+GGSIP+L+NLE++LK + Sbjct: 480 AESPERRKRVAQASGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPSLSNLEDALKTK 539 Query: 376 QKAPPGTARRKRKSESRRQFADSAAARPSPRGFGT 272 QKAPPGTARR+RK+ES ++F DS ++RP P GFG+ Sbjct: 540 QKAPPGTARRRRKTESSKRFVDSVSSRPGPHGFGS 574 >ref|XP_003554443.1| PREDICTED: signal recognition particle 54 kDa protein, chloroplastic-like [Glycine max] Length = 565 Score = 885 bits (2286), Expect = 0.0 Identities = 462/562 (82%), Positives = 511/562 (90%), Gaps = 4/562 (0%) Frame = -1 Query: 1942 SRHFSSLP-STRTLFTSKPTTSNSTKLFSSWAGSSLSVHHSSRNHFTREIWSWVQM--KR 1772 SRHFS+LP S T + +++ S KL S W +SL+ S N F +E+W WV K Sbjct: 7 SRHFSTLPLSFSQNKTLRSSSAKSIKLSSPWTNASLT----SPNCFAKEVWGWVNSNSKG 62 Query: 1771 VTVRREMRGVV-RAEMFGQLTSGLESAWNKLKGEEVLTKENIVEPMKEIRRALLEADVSL 1595 V VRR+ RGVV RAEMFGQLTSGLE+AWNKLKGEEVL+KENIVEPM++IRRALLEADVSL Sbjct: 63 VAVRRDTRGVVVRAEMFGQLTSGLETAWNKLKGEEVLSKENIVEPMRDIRRALLEADVSL 122 Query: 1594 PVARRFVQTVSEQAVGVGLIRGVKPDQQLVKIVRDELVKLMGGEVSELVFAKSGPTIILL 1415 PV RRFVQ+VS+QAVGVG+IRGV+PDQQLVKIV DELV+LMGGEVSELVFAKSGPT+ILL Sbjct: 123 PVVRRFVQSVSDQAVGVGVIRGVRPDQQLVKIVHDELVRLMGGEVSELVFAKSGPTVILL 182 Query: 1414 AGLQGVGKTTVCAKLAFYLKKQGKSCMLVAADIYRPAAIDQLVILGEQVNVPVYTAGTEV 1235 AGLQGVGKTTVCAKLA YLKKQGKSCMLVA D+YRPAAIDQL ILG+QV+VPVYTAGT+V Sbjct: 183 AGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLAILGKQVDVPVYTAGTDV 242 Query: 1234 KPADIARQGLQEAKKKNADVVIVDTAGRLQIDKGMMDELKEVKRALNPTEVLLVVDAMTG 1055 KP++IA+QGL+EAKKK DVVIVDTAGRLQIDK MMDELKEVK+ALNPTEVLLVVDAMTG Sbjct: 243 KPSEIAKQGLEEAKKKKIDVVIVDTAGRLQIDKTMMDELKEVKKALNPTEVLLVVDAMTG 302 Query: 1054 QEAAGLVTAFNLEIGITGAILTKLDGDSRGGAALSVKEVSGRPIKLVGRGERMEDLEPFY 875 QEAA LVT FNLEIGITGAILTKLDGDSRGGAALSVKEVSG+PIKLVGRGERMEDLEPFY Sbjct: 303 QEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFY 362 Query: 874 PDRMAGRILGMGDVLSFVEKAQEVMRKEDAEELQKKIMSTKFDFNDFLKQTRTVAQMGSM 695 PDRMAGRILGMGDVLSFVEKAQ+VMR+EDAEELQKKIMS KFDFNDFLKQTRTVA+MGS+ Sbjct: 363 PDRMAGRILGMGDVLSFVEKAQQVMRQEDAEELQKKIMSAKFDFNDFLKQTRTVAKMGSV 422 Query: 694 TRVLGMIPGMGKVTPAQIREAEKSLKIMEGMIEAMTPEERENPELLAESPVRRKRVAKDS 515 +RV+GMIPGMGKVTPAQIR+AEK+L+ ME MIEAMTPEERE PELLAESPVRRKRVA+DS Sbjct: 423 SRVIGMIPGMGKVTPAQIRDAEKNLQNMEAMIEAMTPEEREKPELLAESPVRRKRVAQDS 482 Query: 514 GKTEQQVSQLVAQLFQMRVRMKNLMGVMQGGSIPALNNLEESLKAEQKAPPGTARRKRKS 335 GKTEQQVSQLVAQLFQMRVRMKNLMGVM+ GS+P L+NLEE+LKAE+KAPPGTARR+++S Sbjct: 483 GKTEQQVSQLVAQLFQMRVRMKNLMGVMESGSLPTLSNLEEALKAEEKAPPGTARRRKRS 542 Query: 334 ESRRQFADSAAARPSPRGFGTK 269 ESR F DS ARPSPRGFG+K Sbjct: 543 ESRSVFGDSTPARPSPRGFGSK 564