BLASTX nr result

ID: Coptis21_contig00005471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005471
         (1220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297860.1| NAC domain protein, IPR003441 [Populus trich...   235   7e-69
ref|XP_002264588.1| PREDICTED: NAC domain-containing protein 29 ...   243   9e-69
ref|XP_002304662.1| NAC domain protein, IPR003441 [Populus trich...   234   1e-68
gb|AEI72272.1| NAC domain transcription factor [Citrus trifoliata]    234   4e-68
ref|XP_002512632.1| NAC domain-containing protein, putative [Ric...   233   6e-68

>ref|XP_002297860.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222845118|gb|EEE82665.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 257

 Score =  235 bits (599), Expect(2) = 7e-69
 Identities = 118/158 (74%), Positives = 130/158 (82%), Gaps = 6/158 (3%)
 Frame = +2

Query: 263 MEKPTLVRNGVISRLPPGFRFHPTDEELVVQYLKRKAFDCPLPASIIHEVNVCKYDPWDL 442
           MEK + V+NGV+ RLPPGFRFHPTDEELVVQYLKRK F CPLPASII EV+VCK DPWDL
Sbjct: 1   MEKLSFVKNGVL-RLPPGFRFHPTDEELVVQYLKRKVFACPLPASIIPEVDVCKSDPWDL 59

Query: 443 PAGDWEKEKYFFSNREVKYLNGNRCNRATGSGYWKATGVDKQIVASRSNQAVGMKKTLVF 622
           P GD E+E+YFFS RE KY NGNR NRATGSGYWKATG+DKQIV S+ +Q VGMKKTLVF
Sbjct: 60  P-GDLEQERYFFSTREAKYPNGNRSNRATGSGYWKATGIDKQIVTSKGHQVVGMKKTLVF 118

Query: 623 YRGKPTKGSKTDWIMHEYRLMG----ACP--QTKNSTQ 718
           YRGKP  G++TDWIMHEYRL      AC   + KNSTQ
Sbjct: 119 YRGKPPHGTRTDWIMHEYRLASTETTACNTLKNKNSTQ 156



 Score = 53.5 bits (127), Expect(2) = 7e-69
 Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 11/83 (13%)
 Frame = +3

Query: 792  VHTEDWVLCRVFLKKRIAKHEDEDAQQCTDNKV------KPRFINFMMQDNT---DKCPX 944
            V  E+WVLCR+FLKKR  K+E+E+ Q   DN++      +P F +FM ++ T   +  P 
Sbjct: 161  VPMENWVLCRIFLKKRGTKNEEENIQVGNDNRLPKLRATEPVFYDFMTKEKTTDLNLAPS 220

Query: 945  XXXXXXXGITE--VCSVGFDHEE 1007
                   GITE   C+   DHEE
Sbjct: 221  SSSSGSSGITEEVSCNESDDHEE 243


>ref|XP_002264588.1| PREDICTED: NAC domain-containing protein 29 isoform 1 [Vitis
           vinifera] gi|296088719|emb|CBI38169.3| unnamed protein
           product [Vitis vinifera]
          Length = 251

 Score =  243 bits (619), Expect(2) = 9e-69
 Identities = 120/153 (78%), Positives = 131/153 (85%), Gaps = 2/153 (1%)
 Frame = +2

Query: 263 MEKPTLVRNGVISRLPPGFRFHPTDEELVVQYLKRKAFDCPLPASIIHEVNVCKYDPWDL 442
           MEK   V+NGV+ RLPPGFRFHPTDEELVVQYLKRKA+ CPLPASII EV+VCK DPWDL
Sbjct: 1   MEKLNFVKNGVL-RLPPGFRFHPTDEELVVQYLKRKAYSCPLPASIIPEVDVCKADPWDL 59

Query: 443 PAGDWEKEKYFFSNREVKYLNGNRCNRATGSGYWKATGVDKQIVASRSNQAVGMKKTLVF 622
           P GD E+E+YFFS RE KY NGNR NRAT SGYWKATG+DKQIVAS+ NQ VGMKKTLVF
Sbjct: 60  P-GDLEQERYFFSTREAKYPNGNRSNRATVSGYWKATGIDKQIVASKGNQVVGMKKTLVF 118

Query: 623 YRGKPTKGSKTDWIMHEYRLMGA--CPQTKNST 715
           YRGKP  GS+TDWIMHEYRL+GA   PQ K+ST
Sbjct: 119 YRGKPPHGSRTDWIMHEYRLVGAETTPQRKSST 151



 Score = 45.4 bits (106), Expect(2) = 9e-69
 Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
 Frame = +3

Query: 783  NSTVHTEDWVLCRVFLKKRIAKHEDEDAQQCTDNKV-------KPRFINFMMQDNTD-KC 938
            +S    E+WVLCR+FLKKR  K+++E  Q   +N+V       +P F +F+ +   D   
Sbjct: 154  SSMAQAENWVLCRIFLKKRGTKNDEEMMQTNNENRVVQKLRSSRPVFYDFLTRGRDDTNL 213

Query: 939  PXXXXXXXXGITEVCSV-GFDHEE 1007
                     GITEV +    +HEE
Sbjct: 214  ASSNSSGSSGITEVSNTESEEHEE 237


>ref|XP_002304662.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222842094|gb|EEE79641.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 255

 Score =  234 bits (596), Expect(2) = 1e-68
 Identities = 112/140 (80%), Positives = 121/140 (86%)
 Frame = +2

Query: 263 MEKPTLVRNGVISRLPPGFRFHPTDEELVVQYLKRKAFDCPLPASIIHEVNVCKYDPWDL 442
           MEK   V+NG + RLPPGFRFHPTDEELVVQYLKRK F CPLPASII EV+VCK DPWDL
Sbjct: 1   MEKLNFVKNGAV-RLPPGFRFHPTDEELVVQYLKRKVFACPLPASIIPEVDVCKSDPWDL 59

Query: 443 PAGDWEKEKYFFSNREVKYLNGNRCNRATGSGYWKATGVDKQIVASRSNQAVGMKKTLVF 622
           P GD E+E+YFFS RE KY NGNR NRATGSGYWKATG+DKQIV S+ NQAVGMKKTLVF
Sbjct: 60  P-GDLEQERYFFSTREAKYPNGNRSNRATGSGYWKATGIDKQIVTSKGNQAVGMKKTLVF 118

Query: 623 YRGKPTKGSKTDWIMHEYRL 682
           YRGKP  G++TDWIMHEYRL
Sbjct: 119 YRGKPPHGTRTDWIMHEYRL 138



 Score = 53.9 bits (128), Expect(2) = 1e-68
 Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
 Frame = +3

Query: 792  VHTEDWVLCRVFLKKRIAKHEDEDAQQCTDNKV------KPRFINFMMQDNTD--KCPXX 947
            V  E+WVLCR+FLKKR  K+E+E+ Q   DN++      KP F +FM +  T        
Sbjct: 161  VPMENWVLCRIFLKKRSTKNEEENMQFDNDNRLSKLRTTKPVFYDFMTKHRTTDLNLAPS 220

Query: 948  XXXXXXGITEV-CSVGFDHEE 1007
                  GITEV C+   DHEE
Sbjct: 221  SSSGSSGITEVSCNESDDHEE 241


>gb|AEI72272.1| NAC domain transcription factor [Citrus trifoliata]
          Length = 249

 Score =  234 bits (597), Expect(2) = 4e-68
 Identities = 117/154 (75%), Positives = 126/154 (81%), Gaps = 2/154 (1%)
 Frame = +2

Query: 263 MEKPTLVRNGVISRLPPGFRFHPTDEELVVQYLKRKAFDCPLPASIIHEVNVCKYDPWDL 442
           MEK   ++NGV+ RLPPGFRFHPTDEELVVQYLKRK F CPLPASII EV+VCK DPWDL
Sbjct: 1   MEKIDFMKNGVL-RLPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDL 59

Query: 443 PAGDWEKEKYFFSNREVKYLNGNRCNRATGSGYWKATGVDKQIVASRSNQAVGMKKTLVF 622
           P GD  +E+YFFS RE KY NGNR NRATGSGYWKATG+DKQI  SR NQ VGMKKTLVF
Sbjct: 60  P-GDVAQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVF 118

Query: 623 YRGKPTKGSKTDWIMHEYRLMGA--CPQTKNSTQ 718
           YRGKP  GS+TDWIMHEYRL+ A   PQ KN  Q
Sbjct: 119 YRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQ 152



 Score = 51.6 bits (122), Expect(2) = 4e-68
 Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 10/82 (12%)
 Frame = +3

Query: 792  VHTEDWVLCRVFLKKRIAKHEDEDAQQCTD------NKVKPRFINFMMQD---NTDKCPX 944
            V T++WVLCR+FLKKR AK EDE+   CT       N  KP F +FM ++   + +  P 
Sbjct: 156  VATDNWVLCRIFLKKRGAKSEDEET--CTKIGGTRANGPKPVFYDFMRKEERADLNLVPT 213

Query: 945  XXXXXXXGITEVCS-VGFDHEE 1007
                   G+TEV S    DHEE
Sbjct: 214  SSSSGSSGVTEVSSNESDDHEE 235


>ref|XP_002512632.1| NAC domain-containing protein, putative [Ricinus communis]
           gi|223548593|gb|EEF50084.1| NAC domain-containing
           protein, putative [Ricinus communis]
          Length = 254

 Score =  233 bits (595), Expect(2) = 6e-68
 Identities = 116/158 (73%), Positives = 128/158 (81%), Gaps = 6/158 (3%)
 Frame = +2

Query: 263 MEKPTLVRNGVISRLPPGFRFHPTDEELVVQYLKRKAFDCPLPASIIHEVNVCKYDPWDL 442
           ME+   V+NGV+ RLPPGFRFHPTDEELVVQYLKRK F CPLPASII EV+VCK DPWDL
Sbjct: 1   MERLNFVKNGVL-RLPPGFRFHPTDEELVVQYLKRKVFSCPLPASIIPEVDVCKSDPWDL 59

Query: 443 PAGDWEKEKYFFSNREVKYLNGNRCNRATGSGYWKATGVDKQIVASRSNQAVGMKKTLVF 622
           P GD E+E+YFFS RE KY NGNR NRAT SGYWKATG+DK+IV S+ NQ VGMKKTLVF
Sbjct: 60  P-GDLEQERYFFSTREAKYPNGNRSNRATSSGYWKATGIDKEIVTSKGNQLVGMKKTLVF 118

Query: 623 YRGKPTKGSKTDWIMHEYRLM----GAC--PQTKNSTQ 718
           YRGKP  G++TDWIMHEYRL+     AC  PQ KN  Q
Sbjct: 119 YRGKPPHGTRTDWIMHEYRLVSPQTAACNSPQKKNPIQ 156



 Score = 52.0 bits (123), Expect(2) = 6e-68
 Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
 Frame = +3

Query: 801  EDWVLCRVFLKKRIAKHEDEDAQQCTDNKV------KPRFINFMMQDNTD--KCPXXXXX 956
            ++WVLCR+FLKKR  K+E+++     +N+V      KP F  F+ +D TD    P     
Sbjct: 163  DNWVLCRIFLKKRSNKNEEDNLHIGNENRVCKLRNTKPVFYEFLTKDRTDLNLAPCSSSS 222

Query: 957  XXXGITEVCS-VGFDHEE 1007
               GITEV S    DHEE
Sbjct: 223  GSSGITEVSSNESDDHEE 240


Top