BLASTX nr result

ID: Coptis21_contig00005458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005458
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512665.1| conserved hypothetical protein [Ricinus comm...   124   1e-26
ref|XP_002303748.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002269943.2| PREDICTED: uncharacterized protein LOC100267...   115   4e-24
emb|CBI29253.3| unnamed protein product [Vitis vinifera]              115   4e-24
ref|XP_002299351.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24

>ref|XP_002512665.1| conserved hypothetical protein [Ricinus communis]
           gi|223548626|gb|EEF50117.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 347

 Score =  124 bits (311), Expect = 1e-26
 Identities = 66/91 (72%), Positives = 73/91 (80%), Gaps = 2/91 (2%)
 Frame = -1

Query: 582 QPASNPEKGSPSHEGRKRKRLSSDDGGE--TTLQEQLVKVLERNNKMLTAQLEAQNNNCH 409
           QP SNPE GS  HE RKRKR  + DG E  TTLQ QL+ VLERN +MLTAQLEAQN N  
Sbjct: 257 QPPSNPEMGSGLHESRKRKRFGTTDGDEETTTLQNQLIGVLERNGEMLTAQLEAQNTNFQ 316

Query: 408 LDRDQRKDQADSLIAVLNKLADALVKIADKM 316
           LDR+QRKDQA+SL+AVLNKLADAL KIADK+
Sbjct: 317 LDREQRKDQANSLVAVLNKLADALGKIADKL 347


>ref|XP_002303748.1| predicted protein [Populus trichocarpa] gi|222841180|gb|EEE78727.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  116 bits (291), Expect = 2e-24
 Identities = 61/90 (67%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
 Frame = -1

Query: 582 QPASNPEKGSPSHEGRKRKRLSSDDGGET-TLQEQLVKVLERNNKMLTAQLEAQNNNCHL 406
           +P++NPE GS SHE RKRKR + D G ET +    L+ VLERN KMLTAQLEAQN N  L
Sbjct: 225 RPSTNPEMGSASHEDRKRKRFAIDGGEETISSHSHLIHVLERNGKMLTAQLEAQNTNFQL 284

Query: 405 DRDQRKDQADSLIAVLNKLADALVKIADKM 316
           DR+QRKD AD L+AVLNKLADAL KIADK+
Sbjct: 285 DREQRKDHADGLVAVLNKLADALGKIADKL 314


>ref|XP_002269943.2| PREDICTED: uncharacterized protein LOC100267783 [Vitis vinifera]
          Length = 340

 Score =  115 bits (289), Expect = 4e-24
 Identities = 61/89 (68%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
 Frame = -1

Query: 579 PASNPEKGSPSHEGRKRKRLSSDDGGETT-LQEQLVKVLERNNKMLTAQLEAQNNNCHLD 403
           PASNPE  S S EGRKRKR + D   ETT LQ+QL++VLERN +ML+ QLEAQN N  LD
Sbjct: 252 PASNPEMASTSQEGRKRKRFTVDGDEETTRLQDQLIEVLERNGRMLSDQLEAQNTNFQLD 311

Query: 402 RDQRKDQADSLIAVLNKLADALVKIADKM 316
           R+QRKDQAD L+AVL+KLADAL +IADK+
Sbjct: 312 REQRKDQADCLVAVLSKLADALGRIADKL 340


>emb|CBI29253.3| unnamed protein product [Vitis vinifera]
          Length = 165

 Score =  115 bits (289), Expect = 4e-24
 Identities = 61/89 (68%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
 Frame = -1

Query: 579 PASNPEKGSPSHEGRKRKRLSSDDGGETT-LQEQLVKVLERNNKMLTAQLEAQNNNCHLD 403
           PASNPE  S S EGRKRKR + D   ETT LQ+QL++VLERN +ML+ QLEAQN N  LD
Sbjct: 77  PASNPEMASTSQEGRKRKRFTVDGDEETTRLQDQLIEVLERNGRMLSDQLEAQNTNFQLD 136

Query: 402 RDQRKDQADSLIAVLNKLADALVKIADKM 316
           R+QRKDQAD L+AVL+KLADAL +IADK+
Sbjct: 137 REQRKDQADCLVAVLSKLADALGRIADKL 165


>ref|XP_002299351.1| predicted protein [Populus trichocarpa] gi|222846609|gb|EEE84156.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score =  115 bits (289), Expect = 4e-24
 Identities = 62/90 (68%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
 Frame = -1

Query: 582 QPASNPEKGSPSHEGRKRKRLSSDDGGET-TLQEQLVKVLERNNKMLTAQLEAQNNNCHL 406
           +PA+NPE GS SHE RKRKR   D   ET +LQ  L+ VLERN KMLTAQLEAQN N  L
Sbjct: 257 RPATNPEMGSASHEERKRKRFVIDGDEETISLQSHLIDVLERNGKMLTAQLEAQNTNFQL 316

Query: 405 DRDQRKDQADSLIAVLNKLADALVKIADKM 316
           DR+QRKD AD L+AVLNKLA+AL KIADK+
Sbjct: 317 DREQRKDHADGLVAVLNKLANALGKIADKL 346


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