BLASTX nr result
ID: Coptis21_contig00005445
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00005445 (552 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI26741.3| unnamed protein product [Vitis vinifera] 261 5e-68 ref|XP_002276224.1| PREDICTED: uncharacterized protein LOC100260... 261 5e-68 ref|XP_002298854.1| predicted protein [Populus trichocarpa] gi|2... 256 2e-66 ref|XP_004151387.1| PREDICTED: uncharacterized protein LOC101207... 253 1e-65 ref|XP_002864399.1| mitochondrial transcription termination fact... 245 3e-63 >emb|CBI26741.3| unnamed protein product [Vitis vinifera] Length = 480 Score = 261 bits (667), Expect = 5e-68 Identities = 127/161 (78%), Positives = 147/161 (91%) Frame = +1 Query: 67 GKLKIGKPVESRFHQLSEELDLDEKWFPLIDYLSTFGLKDSHFVQIYERHMSSLQINVTS 246 GKLK K E+++ +LSEE+DLDEKWFPL+DYLSTFGLK+SHF+Q+YERHM SLQIN S Sbjct: 177 GKLKPRKSTENKYCRLSEEIDLDEKWFPLLDYLSTFGLKESHFIQMYERHMPSLQINACS 236 Query: 247 AQERLEFLLSVGVKHRDIRKIILRQPQILEYTVESNLKSHVAFLVDLGVPHSRIGHIISA 426 AQERLE+L SVGVKHRDI++IILRQPQILEYTVE+NLKSHVAFLV LG+P SRIGH+I+A Sbjct: 237 AQERLEYLSSVGVKHRDIKRIILRQPQILEYTVENNLKSHVAFLVGLGIPDSRIGHVIAA 296 Query: 427 APSLFSYSVEQSLKPTIRYLVEEVGIKTSDVSKVVQLSPQI 549 APSLFSYSVE SLKPT+RYL+EEVGIK +D+ KVVQLSPQI Sbjct: 297 APSLFSYSVENSLKPTVRYLIEEVGIKKNDLGKVVQLSPQI 337 >ref|XP_002276224.1| PREDICTED: uncharacterized protein LOC100260706 [Vitis vinifera] Length = 514 Score = 261 bits (667), Expect = 5e-68 Identities = 127/161 (78%), Positives = 147/161 (91%) Frame = +1 Query: 67 GKLKIGKPVESRFHQLSEELDLDEKWFPLIDYLSTFGLKDSHFVQIYERHMSSLQINVTS 246 GKLK K E+++ +LSEE+DLDEKWFPL+DYLSTFGLK+SHF+Q+YERHM SLQIN S Sbjct: 177 GKLKPRKSTENKYCRLSEEIDLDEKWFPLLDYLSTFGLKESHFIQMYERHMPSLQINACS 236 Query: 247 AQERLEFLLSVGVKHRDIRKIILRQPQILEYTVESNLKSHVAFLVDLGVPHSRIGHIISA 426 AQERLE+L SVGVKHRDI++IILRQPQILEYTVE+NLKSHVAFLV LG+P SRIGH+I+A Sbjct: 237 AQERLEYLSSVGVKHRDIKRIILRQPQILEYTVENNLKSHVAFLVGLGIPDSRIGHVIAA 296 Query: 427 APSLFSYSVEQSLKPTIRYLVEEVGIKTSDVSKVVQLSPQI 549 APSLFSYSVE SLKPT+RYL+EEVGIK +D+ KVVQLSPQI Sbjct: 297 APSLFSYSVENSLKPTVRYLIEEVGIKKNDLGKVVQLSPQI 337 >ref|XP_002298854.1| predicted protein [Populus trichocarpa] gi|222846112|gb|EEE83659.1| predicted protein [Populus trichocarpa] Length = 448 Score = 256 bits (654), Expect = 2e-66 Identities = 124/166 (74%), Positives = 145/166 (87%) Frame = +1 Query: 52 DNGSRGKLKIGKPVESRFHQLSEELDLDEKWFPLIDYLSTFGLKDSHFVQIYERHMSSLQ 231 D +GKL GK E R+ +LSEE+DLDEKW PL+DYLSTFGLK+SHF+QIYERHM SLQ Sbjct: 106 DINGQGKLMTGKSTEDRYPKLSEEIDLDEKWLPLLDYLSTFGLKESHFIQIYERHMPSLQ 165 Query: 232 INVTSAQERLEFLLSVGVKHRDIRKIILRQPQILEYTVESNLKSHVAFLVDLGVPHSRIG 411 INV SA+ERLE+L S+GVKHRDI++I+LRQPQILEYTVESNLKSH AFL+ LG+P+SRIG Sbjct: 166 INVCSARERLEYLQSIGVKHRDIKRILLRQPQILEYTVESNLKSHTAFLIGLGIPNSRIG 225 Query: 412 HIISAAPSLFSYSVEQSLKPTIRYLVEEVGIKTSDVSKVVQLSPQI 549 II+AAPSLFSYSVE SLKPT+RY+VEEVGI ++ KVVQLSPQI Sbjct: 226 QIIAAAPSLFSYSVENSLKPTVRYMVEEVGIDEKNIGKVVQLSPQI 271 >ref|XP_004151387.1| PREDICTED: uncharacterized protein LOC101207692 [Cucumis sativus] gi|449517569|ref|XP_004165818.1| PREDICTED: uncharacterized protein LOC101227066 [Cucumis sativus] Length = 521 Score = 253 bits (646), Expect = 1e-65 Identities = 123/166 (74%), Positives = 148/166 (89%) Frame = +1 Query: 52 DNGSRGKLKIGKPVESRFHQLSEELDLDEKWFPLIDYLSTFGLKDSHFVQIYERHMSSLQ 231 + G +GK+ K +E RF +L+EE+DLDEKWFPL++YL+TFGLK+SHF+Q+YERHM SLQ Sbjct: 179 NTGRKGKVMTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQ 238 Query: 232 INVTSAQERLEFLLSVGVKHRDIRKIILRQPQILEYTVESNLKSHVAFLVDLGVPHSRIG 411 INV SAQERLE+LLSVGVK RD+R+I+LRQPQILEYTVE+NLKSHVAFL+ LG+P SR+G Sbjct: 239 INVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTSRVG 298 Query: 412 HIISAAPSLFSYSVEQSLKPTIRYLVEEVGIKTSDVSKVVQLSPQI 549 II+AAPSLFSYSVE SLKPT+RYLVEEVGI+ D+ KVVQLSPQI Sbjct: 299 QIIAAAPSLFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQI 344 Score = 55.1 bits (131), Expect = 7e-06 Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 1/96 (1%) Frame = +1 Query: 241 TSAQERLEFLLS-VGVKHRDIRKIILRQPQILEYTVESNLKSHVAFLVDLGVPHSRIGHI 417 TS R FL +G ++ K++ + PQ+L Y++ L + FL +G+ +S I + Sbjct: 351 TSWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKV 410 Query: 418 ISAAPSLFSYSVEQSLKPTIRYLVEEVGIKTSDVSK 525 +++ +FS S+E +LKP YL+ E+ + ++K Sbjct: 411 LTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTK 446 >ref|XP_002864399.1| mitochondrial transcription termination factor family protein [Arabidopsis lyrata subsp. lyrata] gi|297310234|gb|EFH40658.1| mitochondrial transcription termination factor family protein [Arabidopsis lyrata subsp. lyrata] Length = 493 Score = 245 bits (626), Expect = 3e-63 Identities = 117/162 (72%), Positives = 145/162 (89%) Frame = +1 Query: 64 RGKLKIGKPVESRFHQLSEELDLDEKWFPLIDYLSTFGLKDSHFVQIYERHMSSLQINVT 243 RGK+ K VE + +LSEE+D+D KW PL+DYLSTFGLK+SHFVQ+YERHM SLQINV Sbjct: 155 RGKVSSRKYVEKLYPRLSEEIDIDPKWVPLLDYLSTFGLKESHFVQMYERHMPSLQINVL 214 Query: 244 SAQERLEFLLSVGVKHRDIRKIILRQPQILEYTVESNLKSHVAFLVDLGVPHSRIGHIIS 423 SAQERL++LLSVGVKHRDI++++LRQPQIL+YTVE+NLK+H++FL+ LG+P+S+IG I++ Sbjct: 215 SAQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVA 274 Query: 424 AAPSLFSYSVEQSLKPTIRYLVEEVGIKTSDVSKVVQLSPQI 549 A PSLFSYSVE SL+PTIRYL+EEVGIK +DV KVVQLSPQI Sbjct: 275 ATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQI 316