BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005431
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17596.3| unnamed protein product [Vitis vinifera]              108   3e-22
ref|XP_003631881.1| PREDICTED: 60S ribosomal protein L38-like [V...   108   5e-22
gb|AFK42835.1| unknown [Lotus japonicus]                              107   1e-21
ref|XP_003546983.1| PREDICTED: 60S ribosomal protein L38-like [G...   107   1e-21
ref|XP_003543572.1| PREDICTED: 60S ribosomal protein L38 [Glycin...   107   1e-21

>emb|CBI17596.3| unnamed protein product [Vitis vinifera]
          Length = 127

 Score =  108 bits (271), Expect = 3e-22
 Identities = 56/70 (80%), Positives = 57/70 (81%)
 Frame = -1

Query: 245 EMPKQIHEIKDFLLTARRKDARSXXXXXXXXXXXXXVRCSKYLYTLCVFDSEKADKLKQS 66
           +MPKQIHEIKDFLLTARRKDARS             VRCSKYLYTLCVFDSEKADKLKQS
Sbjct: 58  KMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQS 117

Query: 65  LPPGLSVQDL 36
           LPPGLSVQDL
Sbjct: 118 LPPGLSVQDL 127


>ref|XP_003631881.1| PREDICTED: 60S ribosomal protein L38-like [Vitis vinifera]
           gi|449442271|ref|XP_004138905.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
           gi|449454586|ref|XP_004145035.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
           gi|449506284|ref|XP_004162704.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
          Length = 69

 Score =  108 bits (270), Expect = 5e-22
 Identities = 56/69 (81%), Positives = 56/69 (81%)
 Frame = -1

Query: 242 MPKQIHEIKDFLLTARRKDARSXXXXXXXXXXXXXVRCSKYLYTLCVFDSEKADKLKQSL 63
           MPKQIHEIKDFLLTARRKDARS             VRCSKYLYTLCVFDSEKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60

Query: 62  PPGLSVQDL 36
           PPGLSVQDL
Sbjct: 61  PPGLSVQDL 69


>gb|AFK42835.1| unknown [Lotus japonicus]
          Length = 69

 Score =  107 bits (267), Expect = 1e-21
 Identities = 55/69 (79%), Positives = 56/69 (81%)
 Frame = -1

Query: 242 MPKQIHEIKDFLLTARRKDARSXXXXXXXXXXXXXVRCSKYLYTLCVFDSEKADKLKQSL 63
           MPKQIHEIKDFLLTARRKDARS             VRCSKYLYTLCVFD+EKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDTEKADKLKQSL 60

Query: 62  PPGLSVQDL 36
           PPGLSVQDL
Sbjct: 61  PPGLSVQDL 69


>ref|XP_003546983.1| PREDICTED: 60S ribosomal protein L38-like [Glycine max]
          Length = 100

 Score =  107 bits (267), Expect = 1e-21
 Identities = 55/69 (79%), Positives = 56/69 (81%)
 Frame = -1

Query: 242 MPKQIHEIKDFLLTARRKDARSXXXXXXXXXXXXXVRCSKYLYTLCVFDSEKADKLKQSL 63
           MPKQIHEIKDFLLTARRKDARS             VRCSKYLYTLCVFDSEKADKLKQSL
Sbjct: 32  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 91

Query: 62  PPGLSVQDL 36
           PPGLSVQD+
Sbjct: 92  PPGLSVQDV 100


>ref|XP_003543572.1| PREDICTED: 60S ribosomal protein L38 [Glycine max]
          Length = 69

 Score =  107 bits (267), Expect = 1e-21
 Identities = 55/69 (79%), Positives = 56/69 (81%)
 Frame = -1

Query: 242 MPKQIHEIKDFLLTARRKDARSXXXXXXXXXXXXXVRCSKYLYTLCVFDSEKADKLKQSL 63
           MPKQIHEIKDFLLTARRKDARS             VRCSKYLYTLCVFDSEKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60

Query: 62  PPGLSVQDL 36
           PPGLSVQD+
Sbjct: 61  PPGLSVQDV 69