BLASTX nr result

ID: Coptis21_contig00005429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005429
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263050.2| PREDICTED: transmembrane protein 56-like [Vi...   208   8e-52
emb|CBI29075.3| unnamed protein product [Vitis vinifera]              204   1e-50
emb|CAN68584.1| hypothetical protein VITISV_043904 [Vitis vinifera]   192   4e-47
ref|XP_004157742.1| PREDICTED: transmembrane protein 56-B-like [...   186   3e-45
ref|XP_004145450.1| PREDICTED: transmembrane protein 56-B-like [...   186   4e-45

>ref|XP_002263050.2| PREDICTED: transmembrane protein 56-like [Vitis vinifera]
          Length = 275

 Score =  208 bits (529), Expect = 8e-52
 Identities = 98/129 (75%), Positives = 116/129 (89%)
 Frame = -2

Query: 387 MPVSKEAVMAIKSYQDQAELLVRDYLLADPFIPYTSVLGGMFACKMVYELAQLISSLYFK 208
           M  S+  +MAIK+YQ+QAE LV+DYLLADPFIPYTS+L G+FACKMVY+L QLIS+ YFK
Sbjct: 1   MASSERTIMAIKAYQNQAEQLVKDYLLADPFIPYTSILSGLFACKMVYDLTQLISTFYFK 60

Query: 207 SYISLTKIQRIEWNNRCISTLHAFFITAMSLYFVFFSEMYSDHRLAGIVTFRSSPLSTFT 28
           SY  LTKIQRIEWNNR +ST+HAFFI A+SLYFVF+S+++SDHRLAG+VTFRSSPLSTF 
Sbjct: 61  SYAGLTKIQRIEWNNRSMSTVHAFFIAALSLYFVFWSDLFSDHRLAGLVTFRSSPLSTFG 120

Query: 27  LGISVGYFL 1
           LG+SVGYFL
Sbjct: 121 LGVSVGYFL 129


>emb|CBI29075.3| unnamed protein product [Vitis vinifera]
          Length = 267

 Score =  204 bits (519), Expect = 1e-50
 Identities = 96/121 (79%), Positives = 112/121 (92%)
 Frame = -2

Query: 363 MAIKSYQDQAELLVRDYLLADPFIPYTSVLGGMFACKMVYELAQLISSLYFKSYISLTKI 184
           MAIK+YQ+QAE LV+DYLLADPFIPYTS+L G+FACKMVY+L QLIS+ YFKSY  LTKI
Sbjct: 1   MAIKAYQNQAEQLVKDYLLADPFIPYTSILSGLFACKMVYDLTQLISTFYFKSYAGLTKI 60

Query: 183 QRIEWNNRCISTLHAFFITAMSLYFVFFSEMYSDHRLAGIVTFRSSPLSTFTLGISVGYF 4
           QRIEWNNR +ST+HAFFI A+SLYFVF+S+++SDHRLAG+VTFRSSPLSTF LG+SVGYF
Sbjct: 61  QRIEWNNRSMSTVHAFFIAALSLYFVFWSDLFSDHRLAGLVTFRSSPLSTFGLGVSVGYF 120

Query: 3   L 1
           L
Sbjct: 121 L 121


>emb|CAN68584.1| hypothetical protein VITISV_043904 [Vitis vinifera]
          Length = 1283

 Score =  192 bits (488), Expect = 4e-47
 Identities = 91/118 (77%), Positives = 107/118 (90%)
 Frame = -2

Query: 363 MAIKSYQDQAELLVRDYLLADPFIPYTSVLGGMFACKMVYELAQLISSLYFKSYISLTKI 184
           MAIK+YQ+QAE LV+DYLLADPFIPYTS+L G+FACKMVY+L QLIS+ YFKSY  LTKI
Sbjct: 1   MAIKAYQNQAEQLVKDYLLADPFIPYTSILSGLFACKMVYDLTQLISTFYFKSYAGLTKI 60

Query: 183 QRIEWNNRCISTLHAFFITAMSLYFVFFSEMYSDHRLAGIVTFRSSPLSTFTLGISVG 10
           QRIEWNNR +ST+HAFFI A+SLYFVF+S+++SDHRLAG+VTFRSSPLSTF LG  +G
Sbjct: 61  QRIEWNNRSMSTVHAFFIAALSLYFVFWSDLFSDHRLAGLVTFRSSPLSTFGLGGKLG 118


>ref|XP_004157742.1| PREDICTED: transmembrane protein 56-B-like [Cucumis sativus]
          Length = 274

 Score =  186 bits (472), Expect = 3e-45
 Identities = 88/129 (68%), Positives = 110/129 (85%)
 Frame = -2

Query: 387 MPVSKEAVMAIKSYQDQAELLVRDYLLADPFIPYTSVLGGMFACKMVYELAQLISSLYFK 208
           M +S + VMAIKSYQ QA+ LV++YLLAD F+P+TSVLGGM ACK+VY+L QL+S+ YFK
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 207 SYISLTKIQRIEWNNRCISTLHAFFITAMSLYFVFFSEMYSDHRLAGIVTFRSSPLSTFT 28
           SY+ LTKIQR+EWNNR +ST HA +I+ MSLYFVF+S+++SD R  G+VTF+SS LSTF 
Sbjct: 61  SYVGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI 120

Query: 27  LGISVGYFL 1
           LGISVGYFL
Sbjct: 121 LGISVGYFL 129


>ref|XP_004145450.1| PREDICTED: transmembrane protein 56-B-like [Cucumis sativus]
          Length = 274

 Score =  186 bits (471), Expect = 4e-45
 Identities = 88/129 (68%), Positives = 110/129 (85%)
 Frame = -2

Query: 387 MPVSKEAVMAIKSYQDQAELLVRDYLLADPFIPYTSVLGGMFACKMVYELAQLISSLYFK 208
           M +S + VMAIKSYQ QA+ LV++YLLAD F+P+TSVLGGM ACK+VY+L QL+S+ YFK
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 207 SYISLTKIQRIEWNNRCISTLHAFFITAMSLYFVFFSEMYSDHRLAGIVTFRSSPLSTFT 28
           SY+ LTKIQR+EWNNR +ST HA +I+ MSLYFVF+S+++SD R  G+VTF+SS LSTF 
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI 120

Query: 27  LGISVGYFL 1
           LGISVGYFL
Sbjct: 121 LGISVGYFL 129


Top