BLASTX nr result

ID: Coptis21_contig00005424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005424
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002870927.1| predicted protein [Arabidopsis lyrata subsp....    59   1e-06
ref|NP_568088.1| uncharacterized protein [Arabidopsis thaliana] ...    58   2e-06
gb|AAM65026.1| unknown [Arabidopsis thaliana]                          57   3e-06
ref|XP_004137707.1| PREDICTED: uncharacterized protein LOC101209...    56   6e-06
emb|CBI22810.3| unnamed protein product [Vitis vinifera]               56   6e-06

>ref|XP_002870927.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316764|gb|EFH47186.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 72

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 33/78 (42%), Positives = 43/78 (55%)
 Frame = +3

Query: 120 MVGGGTLLQRAXXXXXXXXXXDTLANSHAFQRFAVRTSKGLENASKRLGDVSQLAEQKKQ 299
           M GGG  + R           + LANSHAFQRFAVRTSK +EN SK       +A + ++
Sbjct: 1   MAGGGNFIARVISYVANEFIVNGLANSHAFQRFAVRTSKRIENLSK-------MAAENRE 53

Query: 300 EAAGFLEYVTKTFDSSKK 353
           + A  +E  +K  DS KK
Sbjct: 54  KVAQHMEEFSKNMDSMKK 71


>ref|NP_568088.1| uncharacterized protein [Arabidopsis thaliana]
           gi|14030733|gb|AAK53041.1|AF375457_1 AT5g01350/T10O8_60
           [Arabidopsis thaliana] gi|15010720|gb|AAK74019.1|
           AT5g01350/T10O8_60 [Arabidopsis thaliana]
           gi|16974531|gb|AAL31175.1| AT5g01350/T10O8_60
           [Arabidopsis thaliana] gi|110741284|dbj|BAF02192.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332002947|gb|AED90330.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 72

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 33/78 (42%), Positives = 43/78 (55%)
 Frame = +3

Query: 120 MVGGGTLLQRAXXXXXXXXXXDTLANSHAFQRFAVRTSKGLENASKRLGDVSQLAEQKKQ 299
           M GGG  + R           + LANSHAFQRFAVRTSK +EN SK       +A + ++
Sbjct: 1   MAGGGNFIARVISYVANEFIVNGLANSHAFQRFAVRTSKRIENLSK-------MAAENRE 53

Query: 300 EAAGFLEYVTKTFDSSKK 353
           + A  +E   K  DS+KK
Sbjct: 54  KVAQQMEEFAKNIDSTKK 71


>gb|AAM65026.1| unknown [Arabidopsis thaliana]
          Length = 72

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 33/78 (42%), Positives = 43/78 (55%)
 Frame = +3

Query: 120 MVGGGTLLQRAXXXXXXXXXXDTLANSHAFQRFAVRTSKGLENASKRLGDVSQLAEQKKQ 299
           M GGG  + R           + LANSHAFQRFAVRTSK +EN SK       LA + ++
Sbjct: 1   MAGGGNFIARVISYVANEFIVNGLANSHAFQRFAVRTSKRIENLSK-------LAAENRE 53

Query: 300 EAAGFLEYVTKTFDSSKK 353
           + A  +E   K  +S+KK
Sbjct: 54  KVAQQMEEFAKNIESTKK 71


>ref|XP_004137707.1| PREDICTED: uncharacterized protein LOC101209674 isoform 1 [Cucumis
           sativus] gi|449439870|ref|XP_004137708.1| PREDICTED:
           uncharacterized protein LOC101209674 isoform 2 [Cucumis
           sativus] gi|449483520|ref|XP_004156614.1| PREDICTED:
           uncharacterized LOC101209674 isoform 1 [Cucumis sativus]
           gi|449483524|ref|XP_004156615.1| PREDICTED:
           uncharacterized LOC101209674 isoform 2 [Cucumis sativus]
          Length = 71

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 33/78 (42%), Positives = 43/78 (55%)
 Frame = +3

Query: 123 VGGGTLLQRAXXXXXXXXXXDTLANSHAFQRFAVRTSKGLENASKRLGDVSQLAEQKKQE 302
           + GG  + R           ++LANS +FQRFAVRTSK +E       D+S  A QKKQE
Sbjct: 1   MAGGNFVHRVFSYLVNEVLVNSLANSRSFQRFAVRTSKQIE-------DISNKAAQKKQE 53

Query: 303 AAGFLEYVTKTFDSSKKH 356
            A  ++  +K FDS K H
Sbjct: 54  LAEQVKDFSKNFDSFKNH 71


>emb|CBI22810.3| unnamed protein product [Vitis vinifera]
          Length = 108

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 38/103 (36%), Positives = 54/103 (52%)
 Frame = +3

Query: 42  KKRVKKIRVLSKSLLFFFVISAEERKMVGGGTLLQRAXXXXXXXXXXDTLANSHAFQRFA 221
           KKR      L  SL   F + A+   ++ GG  + R           ++LANS AFQRFA
Sbjct: 12  KKRSCGFEKLGFSLCIVFSV-ADFETLMAGGNFMHRVISYVVNEVLVNSLANSPAFQRFA 70

Query: 222 VRTSKGLENASKRLGDVSQLAEQKKQEAAGFLEYVTKTFDSSK 350
           VRT       S+R+ D+S  A QK+QE A  ++ ++K F+S K
Sbjct: 71  VRT-------SRRMEDISNKAAQKRQELAEQVKELSKNFESPK 106


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