BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005412
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-27
ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
emb|CAN79167.1| hypothetical protein VITISV_031236 [Vitis vinifera]   118   9e-25
ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus...   115   5e-24
ref|XP_003549390.1| PREDICTED: pentatricopeptide repeat-containi...   105   6e-21

>ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 895

 Score =  125 bits (315), Expect = 4e-27
 Identities = 78/163 (47%), Positives = 97/163 (59%), Gaps = 12/163 (7%)
 Frame = +3

Query: 156 FFTRTPYFLS-NHNTNRVFLHFLQY----PSFFSPNTIFNLPMNQNHSLSTSVQCAT--- 311
           FF +TP      H   R  LH   +    P+ +SP     + MN++   S     AT   
Sbjct: 328 FFAKTPILCHVGHTRLRPLLHGCSHHHFKPTTYSPYIKDRIFMNKSAHFSNLALSATNKY 387

Query: 312 ----MPIGRTMSKKAQNKAYRQSPEGVLHLKLDMCSKHGDLVEALRLYDEARRERILISK 479
                   +TMS KA+ KA R+SPEGVL  KLDMCSK GD+VEALRLYDEAR   + +S+
Sbjct: 388 IPESSAAAKTMSNKARKKARRESPEGVLRFKLDMCSKRGDVVEALRLYDEARSLGVPLSQ 447

Query: 480 PHYNSLLYLCSCSNTSGSLENSVSDEKLGLSRGFEIFKQMGID 608
            +YN LLYLCSCS ++G  EN V+   L L RGFEIFKQMG+D
Sbjct: 448 HNYNVLLYLCSCSGSNGD-ENVVN---LALKRGFEIFKQMGVD 486


>ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 526

 Score =  122 bits (307), Expect = 4e-26
 Identities = 63/97 (64%), Positives = 74/97 (76%)
 Frame = +3

Query: 318 IGRTMSKKAQNKAYRQSPEGVLHLKLDMCSKHGDLVEALRLYDEARRERILISKPHYNSL 497
           +  TMS KA+ KA R+SPEGVL  KLDMCSK GD+VEALRLYDEAR   + +S+ HYN L
Sbjct: 25  VAETMSNKARKKARRESPEGVLRFKLDMCSKRGDVVEALRLYDEARSRGVPLSQHHYNVL 84

Query: 498 LYLCSCSNTSGSLENSVSDEKLGLSRGFEIFKQMGID 608
           LYLCSCS ++G  EN V+   L L RGFEIFKQMG+D
Sbjct: 85  LYLCSCSGSNGD-ENVVN---LALKRGFEIFKQMGVD 117


>emb|CAN79167.1| hypothetical protein VITISV_031236 [Vitis vinifera]
          Length = 696

 Score =  118 bits (295), Expect = 9e-25
 Identities = 73/163 (44%), Positives = 96/163 (58%), Gaps = 12/163 (7%)
 Frame = +3

Query: 156 FFTRTPYFLS-NHNTNRVFLHFLQY----PSFFSPNTIFNLPMNQN-HSLSTSVQCATMP 317
           FF + P      H   R  L+   +    P+ +SP     +  N++ H L+ ++      
Sbjct: 328 FFAKAPILCHVGHTRLRPLLYGCSHHHFKPTTYSPYIKDRIFTNKSAHFLNVALSATNKY 387

Query: 318 I------GRTMSKKAQNKAYRQSPEGVLHLKLDMCSKHGDLVEALRLYDEARRERILISK 479
           I       +TMS K + KA R+SPEGVL  K DMCSKHGD+VEAL LYDEAR   + +S+
Sbjct: 388 IPESSAAAKTMSNKTRKKARRESPEGVLRFKTDMCSKHGDVVEALHLYDEARSRGVPLSQ 447

Query: 480 PHYNSLLYLCSCSNTSGSLENSVSDEKLGLSRGFEIFKQMGID 608
            +YN LLYLCSCS ++G  EN V+   L L RGFEIFKQMG+D
Sbjct: 448 HNYNVLLYLCSCSGSNGD-ENVVN---LALKRGFEIFKQMGVD 486


>ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223534642|gb|EEF36338.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 589

 Score =  115 bits (289), Expect = 5e-24
 Identities = 76/187 (40%), Positives = 111/187 (59%), Gaps = 16/187 (8%)
 Frame = +3

Query: 96  MAFSTHISPSHLLKNSTLFNFFTRTPYFLS-NHNTNRVFLHFLQYPSFFSPNTIFNLPMN 272
           M   +  +PS L + S LF+FFT+ P+F S  +N + +   FL Y  +  P  + N+  +
Sbjct: 1   MLRGSSFAPS-LNRASPLFSFFTKIPFFSSFQNNFHTIRRPFLHYHYYVFPKPVCNIQAS 59

Query: 273 Q----------NHSLSTSVQC--ATMPIGRTMSKKAQNKAYRQSPEGVLHLKLDMCSKHG 416
           +          + +LS   Q   ++    + +S KA+ KA ++SPEGVL  K+D CSKHG
Sbjct: 60  RFCMERRVQFCSSALSAKPQIHESSALAAKKVSNKAKKKARQESPEGVLRSKIDNCSKHG 119

Query: 417 DLVEALRLYDEARRERILISKPHYNSLLYLCSCSNTSGSLENSVSDEK---LGLSRGFEI 587
           +LVEALRLYDEAR   + +++ HYN LLYLCS S +S  L  + ++EK   +   RGFEI
Sbjct: 120 NLVEALRLYDEARINGVQLNQHHYNVLLYLCS-SGSSVELGGNGANEKASNMQFKRGFEI 178

Query: 588 FKQMGID 608
           F+QM ID
Sbjct: 179 FQQMVID 185


>ref|XP_003549390.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  105 bits (262), Expect = 6e-21
 Identities = 62/153 (40%), Positives = 93/153 (60%), Gaps = 3/153 (1%)
 Frame = +3

Query: 150 FNFFTRTPYF---LSNHNTNRVFLHFLQYPSFFSPNTIFNLPMNQNHSLSTSVQCATMPI 320
           F+ FT++ Y+   LS+HN      H L   + FS  ++   P +++   +T+++      
Sbjct: 9   FSIFTQSHYWRPLLSSHNAK----HALTAATNFSITSLARTPKSRDEGTTTTIK------ 58

Query: 321 GRTMSKKAQNKAYRQSPEGVLHLKLDMCSKHGDLVEALRLYDEARRERILISKPHYNSLL 500
              +S K++ KA+ +SPEGVL  KL+ CSK GD+++ALR YDEAR+  +L+S  HYN LL
Sbjct: 59  ---LSSKSRRKAFYESPEGVLLRKLNECSKDGDVIQALRHYDEARKLGVLLSLDHYNKLL 115

Query: 501 YLCSCSNTSGSLENSVSDEKLGLSRGFEIFKQM 599
           YLC       S+E++     LGL RGFEIF+QM
Sbjct: 116 YLC-------SVESAAGVPHLGLKRGFEIFQQM 141