BLASTX nr result

ID: Coptis21_contig00005401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005401
         (3048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589553.1| hypothetical protein MTR_1g026010 [Medicago ...    94   2e-16
ref|XP_002489305.1| hypothetical protein SORBIDRAFT_0010s007680 ...    93   5e-16
emb|CCA66039.1| hypothetical protein [Beta vulgaris subsp. vulga...    92   1e-15
ref|XP_002465815.1| hypothetical protein SORBIDRAFT_01g046340 [S...    89   5e-15
ref|XP_002438099.1| hypothetical protein SORBIDRAFT_10g007985 [S...    85   1e-13

>ref|XP_003589553.1| hypothetical protein MTR_1g026010 [Medicago truncatula]
            gi|355478601|gb|AES59804.1| hypothetical protein
            MTR_1g026010 [Medicago truncatula]
          Length = 352

 Score = 94.0 bits (232), Expect = 2e-16
 Identities = 54/206 (26%), Positives = 99/206 (48%)
 Frame = +1

Query: 949  EDLEIMDIPRDLLLQSQARWTASLIGKLISDVPHHPNEILRAVRSKWNLKKKLDIVVLEG 1128
            E+ E + +  D++ + +A +  +L+GK+ +DVP++     + +   W LK  ++I  L  
Sbjct: 12   EEGEGITVEEDVITEGEA-FGRTLVGKIWTDVPYNVRAFKQTMIQAWRLKNTVEIQDLNK 70

Query: 1129 DLFVFRFERESDKAKIIKEQPWQVLGYLLVLKAFSPNIQPSTVLFTTTPIWIGFTGLLLE 1308
            +LF+F+F    D   I++  PW     LL+L   S   QPS +   T   W+    L L+
Sbjct: 71   NLFLFKFSSRRDAENILQSGPWSFDRNLLILDTISGEEQPSELDLHTVQFWVRIYDLPLK 130

Query: 1309 HQLSIVVERIASAAGRVLEVDPADNNPKDADGYRARVEVNIEEPIRQGVMVQTINHEPVW 1488
             +  ++ ++I    G+ LEVDP DNN +     R +V +++  P+++G ++         
Sbjct: 131  LRYDLMAKKIGDLVGKFLEVDPRDNN-RMGKSIRIKVAIDLRNPLKRGTVLPNF------ 183

Query: 1489 ISFIYVGMPYHSCKRCFKIGHDTYYC 1566
                        C +C +IGH    C
Sbjct: 184  ------------CYKCGRIGHQMKEC 197


>ref|XP_002489305.1| hypothetical protein SORBIDRAFT_0010s007680 [Sorghum bicolor]
            gi|241946953|gb|EES20098.1| hypothetical protein
            SORBIDRAFT_0010s007680 [Sorghum bicolor]
          Length = 531

 Score = 92.8 bits (229), Expect = 5e-16
 Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 4/244 (1%)
 Frame = +1

Query: 859  KQQHQPPDLDLYIMEQITHSLHQSLVLGNPEDLEIMDIPRDLLLQSQARWTASLIGKLIS 1038
            K+   P  +DL+    +T      +   + ED EI+          Q  W   L+GK++S
Sbjct: 13   KENPNPSVIDLFHQLILTEQEEAVVEFSDEEDEEILP---------QEEWL--LVGKVLS 61

Query: 1039 DVPHHPNEILRAVRSKWNLKKKLDIVVLE---GDLFVFRFERESDKAKIIKEQPWQVLGY 1209
              P H   I  A++  W     L + V+     ++F+  F  +SD  +++   PW V  +
Sbjct: 62   PTPIHMTTIRSAIKPAWGNPMGLKLRVIGEKVDNMFITEFGCKSDLERVLAGTPWIVGRH 121

Query: 1210 LLVLKAFSPNIQPSTVLFTTTPIWIGFTGLLLEHQLSIVVERIASAAGRVLEVDPADNNP 1389
             ++LK ++  +  S ++F    IW+    L L         R  S  G V+ +D  D+  
Sbjct: 122  AVILKDYNEKLSASEIVFDRMEIWVRIPNLPLGWMNQTRGSRAMSLIGPVVRMDVDDDGK 181

Query: 1390 KDADGYRARVEVNIEEPIRQGVMVQTIN-HEPVWISFIYVGMPYHSCKRCFKIGHDTYYC 1566
                  RARV + I++P+R+GV+++     EP W    Y  +PY+ C  C  +GH    C
Sbjct: 182  ASGAFLRARVAIEIDKPLRRGVLLRMSKAEEPRWFHAQYEKLPYY-CFGCGIMGHSEVEC 240

Query: 1567 NLPG 1578
              PG
Sbjct: 241  LHPG 244


>emb|CCA66039.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 488

 Score = 91.7 bits (226), Expect = 1e-15
 Identities = 60/207 (28%), Positives = 101/207 (48%)
 Frame = +1

Query: 949  EDLEIMDIPRDLLLQSQARWTASLIGKLISDVPHHPNEILRAVRSKWNLKKKLDIVVLEG 1128
            E+ E++D+         A+ +  L+GK++S    + + + R +   W+L   + +  ++ 
Sbjct: 17   EENEVVDLGAVESTNLTAKTSLMLVGKVLSTRAVNLDALKRVMTQIWSLNSNMVVRAIDS 76

Query: 1129 DLFVFRFERESDKAKIIKEQPWQVLGYLLVLKAFSPNIQPSTVLFTTTPIWIGFTGLLLE 1308
            + F+F+F    DKAKI+  +PW     LLV+     + QPS V+  T+P W+    L   
Sbjct: 77   NSFIFQFFHWKDKAKILDGRPWLFDQKLLVIDEILGDTQPSDVVLETSPFWVRIYNLPFN 136

Query: 1309 HQLSIVVERIASAAGRVLEVDPADNNPKDADGYRARVEVNIEEPIRQGVMVQTINHEPVW 1488
             +    V  IA   G VLEVD  D   +     R +VE+NI +P+R+   ++  +     
Sbjct: 137  CRSDTEVRAIAGGLGPVLEVDIDDFGLERF--CRVKVELNIFKPLRRRQRIRRKDGAVAS 194

Query: 1489 ISFIYVGMPYHSCKRCFKIGHDTYYCN 1569
            I + Y  +P H C RC  +GH    CN
Sbjct: 195  IDYKYERLP-HFCFRCGVLGHGDKDCN 220


>ref|XP_002465815.1| hypothetical protein SORBIDRAFT_01g046340 [Sorghum bicolor]
            gi|241919669|gb|EER92813.1| hypothetical protein
            SORBIDRAFT_01g046340 [Sorghum bicolor]
          Length = 1028

 Score = 89.4 bits (220), Expect = 5e-15
 Identities = 75/310 (24%), Positives = 135/310 (43%), Gaps = 19/310 (6%)
 Frame = +1

Query: 1015 SLIGKLISDVPHHPNEILRAVRSKWN--LKKKLDIVVLEGD-LFVFRFERESDKAKIIKE 1185
            +++GK++S +  H N I  A++  W      K   +  +GD +F+  F  ++D  +++  
Sbjct: 60   AVVGKVLSPMAVHVNTIRTAMKPAWGNPFGLKFRAIGEKGDNMFMAEFGTKADLERVLSG 119

Query: 1186 QPWQVLGYLLVLKAFSPNIQPSTVLFTTTPIWIGFTGLLLEHQLSIVVERIASAAGRVLE 1365
             PW V  + +VLK +   +  S ++F    IW+    L L         R+ S  G V++
Sbjct: 120  TPWMVGKHAIVLKLYDEKLSASEIVFDRMDIWVRILNLPLGWMNQQRGARVMSLIGSVVK 179

Query: 1366 VDPADNNPKDADGYRARVEVNIEEPIRQGVMVQ-TINHEPVWISFIYVGMPYHSCKRCFK 1542
            +D   +        R RV + I++P+R+GV+++ + + EP W    Y  +PY+ C  C  
Sbjct: 180  LDVDSDGKASGAFLRGRVSIEIDKPLRRGVLLRMSKSEEPKWFEAQYEKLPYY-CSSCGM 238

Query: 1543 IGHDTYYCNLPGT-----DIAIPTALQDPGAVQMEFYXXXXXXXXXXXXXXXXINMTDEA 1707
            +GH    C+ P        +     L+ P   +  F                    T   
Sbjct: 239  LGHSEIGCSQPAQRNEAGKLPYDIQLRAPEEKKRRFQTFGGAAAESYGSRSSSAART--P 296

Query: 1708 RNHFNALFGGIASRLLTSSYDHG--LTQIDQVQAI--PMET----ANPKGNI--LVQPIV 1857
            ++H++    G ASR    S+     L + D+VQ +  P++T    + PKG I  L+   +
Sbjct: 297  KDHYSRSSDGRASRGYEESHRSASDLLEADEVQEVQSPLKTDGGGSQPKGRIGGLIGKKL 356

Query: 1858 SFPESPKPDP 1887
                S +P P
Sbjct: 357  VLETSDRPTP 366


>ref|XP_002438099.1| hypothetical protein SORBIDRAFT_10g007985 [Sorghum bicolor]
            gi|241916322|gb|EER89466.1| hypothetical protein
            SORBIDRAFT_10g007985 [Sorghum bicolor]
          Length = 649

 Score = 85.1 bits (209), Expect = 1e-13
 Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 4/213 (1%)
 Frame = +1

Query: 949  EDLEIMDIPRDLLLQSQARWTASLIGKLISDVPHHPNEILRAVRSKWNLKKKLDIVVL-- 1122
            +++ I++   D    + A    +L+GK++S VP H   +  A+R  W     L    +  
Sbjct: 32   DEVAILEFSDDEDSDTMAPTEWTLVGKVLSPVPVHVTTVRSAMRLAWGNPIGLKFRAIGE 91

Query: 1123 -EGDLFVFRFERESDKAKIIKEQPWQVLGYLLVLKAFSPNIQPSTVLFTTTPIWIGFTGL 1299
             E +LFV  F    DK +++   PW V  Y ++L+ +   +  + + F    +W+    L
Sbjct: 92   KEDNLFVVEFGSARDKERVLGGSPWMVGKYSVLLQEYDEKLCAADIKFDRLDLWVRILNL 151

Query: 1300 LLEHQLSIVVERIASAAGRVLEVDPADNNPKDADGYRARVEVNIEEPIRQGVMVQ-TINH 1476
             L         R     G+V+E+D   +        RARV + I++P+R+G++++     
Sbjct: 152  PLGWMNRSRGSRAMGLIGQVVEMDVDADGKASGAFLRARVSMEIDKPVRRGILLRVNKTD 211

Query: 1477 EPVWISFIYVGMPYHSCKRCFKIGHDTYYCNLP 1575
            EP W    Y  +PY  C  C  IGH    C  P
Sbjct: 212  EPRWFQAQYEKLPY-ICLACGIIGHSDMECPTP 243


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