BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005391
         (1008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36057.3| unnamed protein product [Vitis vinifera]              301   2e-79
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19...   292   8e-77
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ...   278   2e-72
ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788...   277   3e-72
ref|XP_003597674.1| MMS19 nucleotide excision repair protein-lik...   274   3e-71

>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  301 bits (770), Expect = 2e-79
 Identities = 148/217 (68%), Positives = 188/217 (86%)
 Frame = +3

Query: 48   REQEIHPLVMRSAADAFNVLLSDSDVCLNKRFHATMKPLYKQRFFSSMMPILLTSIKESD 227
            +EQ++ P V +SAADAF+VL+SDS++CLNKRFHA ++PLYKQRFFSS++PIL++S+ ES 
Sbjct: 930  QEQDVLPSVAKSAADAFHVLMSDSEICLNKRFHANIRPLYKQRFFSSVLPILVSSMAESR 989

Query: 228  SSMTRSMLYRAFGNVVYNTPLPAVVTEAKALIFVLLDGLSILSMDVRDRDLTYSLLLVLS 407
             S TRSMLYRA  +++ +TPL AV++EAK +I +LLD LSILS    D+D+ Y+LLLVLS
Sbjct: 990  LSNTRSMLYRALAHIISDTPLIAVLSEAKKIIPILLDSLSILSTYNLDKDILYNLLLVLS 1049

Query: 408  GMIMDENGREAVTENAHIIINRLIGLVYYPHMMLVRETAIQCLVAMSGLPHTRIFPMRTK 587
            G++MD+NG+E V ENAH+IIN LIGLV YPHMM+VRETAIQCLVAMS LPH RI+PMRT+
Sbjct: 1050 GILMDKNGQETVVENAHVIINCLIGLVGYPHMMVVRETAIQCLVAMSRLPHARIYPMRTQ 1109

Query: 588  VLQAISKSLDDPKRTVRHEAVRCLQAWASIASRSVNF 698
            VL+++ K+LDDPKR VRHEAVRC QAWASIASRS++F
Sbjct: 1110 VLRSVQKALDDPKRAVRHEAVRCRQAWASIASRSLHF 1146


>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
            communis] gi|223544868|gb|EEF46383.1| DNA
            repair/transcription protein met18/mms19, putative
            [Ricinus communis]
          Length = 1174

 Score =  292 bits (748), Expect = 8e-77
 Identities = 143/227 (62%), Positives = 186/227 (81%)
 Frame = +3

Query: 18   PSQQDTLQECREQEIHPLVMRSAADAFNVLLSDSDVCLNKRFHATMKPLYKQRFFSSMMP 197
            P +  +L+   EQ++   VM+SA+DAF +L+SDS++CLN+++HA ++PLYKQRFFSS+MP
Sbjct: 948  PLKHGSLENNGEQDMQQSVMKSASDAFQILMSDSELCLNRKYHAIVRPLYKQRFFSSIMP 1007

Query: 198  ILLTSIKESDSSMTRSMLYRAFGNVVYNTPLPAVVTEAKALIFVLLDGLSILSMDVRDRD 377
            IL   I +SDSS ++S+LYRAF +V+ +TPL  +  +AK L+ VLLDGL++L  DV D+D
Sbjct: 1008 ILYPLITKSDSSFSKSLLYRAFAHVISDTPLSVISNDAKKLVPVLLDGLTLLGKDVLDKD 1067

Query: 378  LTYSLLLVLSGMIMDENGREAVTENAHIIINRLIGLVYYPHMMLVRETAIQCLVAMSGLP 557
            + Y LLLVLSG++ D NG+EAV ENAHIII  LI LV YPHMML+RETA+QCLVAMS LP
Sbjct: 1068 IMYGLLLVLSGILTDTNGKEAVIENAHIIIKCLIELVAYPHMMLIRETAVQCLVAMSELP 1127

Query: 558  HTRIFPMRTKVLQAISKSLDDPKRTVRHEAVRCLQAWASIASRSVNF 698
            HTRI+P+R +VLQAISK+LDDPKR VR EAVRC QAWASIASRS+++
Sbjct: 1128 HTRIYPVRIQVLQAISKALDDPKRAVRQEAVRCRQAWASIASRSLHY 1174


>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
            sativus]
          Length = 1147

 Score =  278 bits (710), Expect = 2e-72
 Identities = 137/227 (60%), Positives = 185/227 (81%)
 Frame = +3

Query: 18   PSQQDTLQECREQEIHPLVMRSAADAFNVLLSDSDVCLNKRFHATMKPLYKQRFFSSMMP 197
            P QQ  L++  E  +   VM+ AA+AF++L+SDS+ CLN++FHA ++PLYKQRFFS+MMP
Sbjct: 921  PLQQFKLEKDNETSLDFAVMKGAAEAFHILMSDSEACLNRKFHAIVRPLYKQRFFSTMMP 980

Query: 198  ILLTSIKESDSSMTRSMLYRAFGNVVYNTPLPAVVTEAKALIFVLLDGLSILSMDVRDRD 377
            I  T + +SD+S++R MLY+A+ +V+ +TPL A++++AK  I +LLDGL  LS++  ++D
Sbjct: 981  IFQTLVSKSDTSLSRYMLYQAYAHVISDTPLTAILSDAKKFIPMLLDGLLTLSVNGINKD 1040

Query: 378  LTYSLLLVLSGMIMDENGREAVTENAHIIINRLIGLVYYPHMMLVRETAIQCLVAMSGLP 557
            + YSLLLVLSG++MD+NG+EAVTENAH I++ L GL  + HMMLVRETAIQCLVA+S LP
Sbjct: 1041 VVYSLLLVLSGILMDKNGQEAVTENAHKIVDCLAGLTDFSHMMLVRETAIQCLVAVSELP 1100

Query: 558  HTRIFPMRTKVLQAISKSLDDPKRTVRHEAVRCLQAWASIASRSVNF 698
            H RI+PMR +VL  ISK+LDDPKR+VR EAVRC QAWASIASRS++F
Sbjct: 1101 HARIYPMRRQVLHVISKALDDPKRSVRQEAVRCRQAWASIASRSLHF 1147


>ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788537 [Glycine max]
          Length = 1135

 Score =  277 bits (708), Expect = 3e-72
 Identities = 141/220 (64%), Positives = 182/220 (82%)
 Frame = +3

Query: 18   PSQQDTLQECREQEIHPLVMRSAADAFNVLLSDSDVCLNKRFHATMKPLYKQRFFSSMMP 197
            P  +D+L+   EQ    LV++ A DAF+VL+SDS+VCLN++FHAT++PLYKQRFFSS+MP
Sbjct: 917  PLIKDSLENTEEQIQDLLVIKCATDAFHVLMSDSEVCLNRKFHATIRPLYKQRFFSSVMP 976

Query: 198  ILLTSIKESDSSMTRSMLYRAFGNVVYNTPLPAVVTEAKALIFVLLDGLSILSMDVRDRD 377
            IL   I +S SS++RS LYRAF +++ +TP+ A+V+EAK LI VLLD LS+L+ +++D+D
Sbjct: 977  ILQQIITKSHSSLSRSFLYRAFAHIMSDTPMVAIVSEAKKLIPVLLDCLSMLT-EIQDKD 1035

Query: 378  LTYSLLLVLSGMIMDENGREAVTENAHIIINRLIGLVYYPHMMLVRETAIQCLVAMSGLP 557
            + Y LLLVLSG++M++NG+EAV ENAHIIIN LI LV YPH MLVRETAIQCLVA+S LP
Sbjct: 1036 MLYGLLLVLSGILMEKNGQEAVVENAHIIINCLIKLVGYPHKMLVRETAIQCLVALSELP 1095

Query: 558  HTRIFPMRTKVLQAISKSLDDPKRTVRHEAVRCLQAWASI 677
            H RI+PMRT+VL+AISK LDD KR VRHEAV+C Q WAS+
Sbjct: 1096 HARIYPMRTQVLRAISKCLDDSKRAVRHEAVKCRQTWASM 1135


>ref|XP_003597674.1| MMS19 nucleotide excision repair protein-like protein [Medicago
            truncatula] gi|355486722|gb|AES67925.1| MMS19 nucleotide
            excision repair protein-like protein [Medicago
            truncatula]
          Length = 1140

 Score =  274 bits (700), Expect = 3e-71
 Identities = 140/230 (60%), Positives = 183/230 (79%), Gaps = 1/230 (0%)
 Frame = +3

Query: 12   TLPSQQDTLQECREQEIHPLVMRSAADAFNVLLSDSDVCLNKRFHATMKPLYKQRFFSSM 191
            ++P  + +L+   +Q+  PL  + A +AF+VL+SD++ CLN++FHAT++PLYKQRFFSSM
Sbjct: 911  SVPLVEGSLENTEKQKCDPLARKCATEAFHVLMSDAEDCLNRKFHATVRPLYKQRFFSSM 970

Query: 192  MPILLTSIKESDSSMTRSMLYRAFGNVVYNTPLPAVVTEAKALIFVLLDGLSILSMDVRD 371
            MPI L  I  SDS ++RS+L RAF +V+ +TPL  ++ EAK LI VLLD L +L+ D++D
Sbjct: 971  MPIFLQLISRSDSLLSRSLLLRAFAHVMSDTPLIVILNEAKKLIPVLLDCLFMLTEDIQD 1030

Query: 372  RDLTYSLLLVLSGMIMDENGREAVTENAHIIINRLIGLVYYPHMMLVRETAIQCLVAMSG 551
            +D+ Y LLLVLSGM+ ++NG+EAV ENAHIIIN LI LV YPH  LVRETAIQCLVA+S 
Sbjct: 1031 KDILYGLLLVLSGMLTEKNGQEAVIENAHIIINGLIKLVDYPHKTLVRETAIQCLVALSE 1090

Query: 552  LPHTRIFPMRTKVLQAISKSLDDPKRTVRHEAVRCLQAWASIA-SRSVNF 698
            LPH RI+P+RT+VLQAI K LDD KR+VR+EAV+C QAWASIA SRS+ F
Sbjct: 1091 LPHVRIYPLRTQVLQAIFKCLDDTKRSVRNEAVKCRQAWASIASSRSLRF 1140