BLASTX nr result

ID: Coptis21_contig00005388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005388
         (1839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95883.1| unknown [Populus trichocarpa]                          758   0.0  
ref|XP_004143162.1| PREDICTED: alternative NAD(P)H dehydrogenase...   756   0.0  
ref|XP_002313376.1| predicted protein [Populus trichocarpa] gi|2...   756   0.0  
emb|CAB52796.1| putative internal rotenone-insensitive NADH dehy...   749   0.0  
ref|XP_003551266.1| PREDICTED: probable NADH dehydrogenase-like ...   748   0.0  

>gb|ABK95883.1| unknown [Populus trichocarpa]
          Length = 488

 Score =  758 bits (1958), Expect = 0.0
 Identities = 372/498 (74%), Positives = 424/498 (85%)
 Frame = -3

Query: 1825 MTWFRNILKVTSLNPSLYSKPKTPSPQILXXXXXXXXXXXNEQQTITKKPSGLEPTTRNE 1646
            M+ FRN++++++      SKP   +P  L             +       +GLEPT  +E
Sbjct: 1    MSLFRNLIQLSTSK----SKPLLQNPNFLFTSLSHFTTDTPTRY------AGLEPTKGDE 50

Query: 1645 KPRVVVLGSGWAGCRLMKGLDTNIYDIVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIG 1466
            KPRVVVLGSGWAGCRLMKG+DT++YD+VCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIG
Sbjct: 51   KPRVVVLGSGWAGCRLMKGIDTDLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIG 110

Query: 1465 RIQPAISKSPGSYFFLANCNAVDVQNHVISCETVTDEVETVRPWKFNIAYDKLVIASGAE 1286
            RIQPAISK+PGSYFFLANC ++D + H++ CETVTD ++TV PW+F I+YDKL+IA GAE
Sbjct: 111  RIQPAISKAPGSYFFLANCTSLDTEKHMVHCETVTDGLDTVDPWRFKISYDKLIIALGAE 170

Query: 1285 ASTFGIKGVKEHATFLREVSHAQEIRRKLLLNLMLSEVPGLSEEEKIRLLHCVVIGGGPT 1106
            A TFGI GVKEHA FLREV HAQEIRRKLLLNLMLS++PGLSEEEK RLLHCVV+GGGPT
Sbjct: 171  ALTFGIHGVKEHAIFLREVRHAQEIRRKLLLNLMLSDMPGLSEEEKSRLLHCVVVGGGPT 230

Query: 1105 GVEFSGELSDFIMNDVRERYSHVKDYIQVTLIEANEILSSFDVRLRDYATNQLTKSGVHL 926
            GVEFSGELSDFI+ DVR+ YSHVKDYI VTLIEANEILSSFD  LR YAT QLTKSGVHL
Sbjct: 231  GVEFSGELSDFILKDVRQTYSHVKDYIHVTLIEANEILSSFDDSLRRYATKQLTKSGVHL 290

Query: 925  VHGVVKDVQSQKIILSDDTEVPYGLLVWSTGVGPSPFTKSMEFPKSPGGRIGVDDWLRVP 746
            V G+VKDV+ QK+IL+D TEVPYGLLVWSTGVGPS F KS+E  KSPGGRIG+D+WLRVP
Sbjct: 291  VRGIVKDVKPQKLILTDGTEVPYGLLVWSTGVGPSSFVKSLELSKSPGGRIGIDEWLRVP 350

Query: 745  SVQDVFAVGDCAGFLETTGKPVLPALAQVAERQGKYLAAMLNQIGKEGGGHANCVGDKDL 566
            SV DVFA+GDC+GFLE+TGKPVLPALAQVAERQGKYLA +LN+IGK+GGG      + +L
Sbjct: 351  SVPDVFAIGDCSGFLESTGKPVLPALAQVAERQGKYLAKLLNKIGKDGGGRRTSGEEVEL 410

Query: 565  GAPFVYKHLGSMATVGRYKALVDLRKSKEAKGLSLTGFVSWFIWRSAYLTRVVSWRNRFY 386
            G PFVY+HLGSMAT+GRYKALVDLR+SKEAKGL+L GF SWFIWRSAYLTRV+SWRNRFY
Sbjct: 411  GDPFVYRHLGSMATIGRYKALVDLRQSKEAKGLALKGFASWFIWRSAYLTRVISWRNRFY 470

Query: 385  VAVNWLTTFVFGRDISRI 332
            VA+NW TTFVFGRDISRI
Sbjct: 471  VAINWATTFVFGRDISRI 488


>ref|XP_004143162.1| PREDICTED: alternative NAD(P)H dehydrogenase 1, mitochondrial-like
            [Cucumis sativus] gi|449523139|ref|XP_004168582.1|
            PREDICTED: alternative NAD(P)H dehydrogenase 1,
            mitochondrial-like [Cucumis sativus]
          Length = 505

 Score =  756 bits (1952), Expect = 0.0
 Identities = 369/505 (73%), Positives = 419/505 (82%), Gaps = 7/505 (1%)
 Frame = -3

Query: 1825 MTWFRNILKVT-------SLNPSLYSKPKTPSPQILXXXXXXXXXXXNEQQTITKKPSGL 1667
            M WFRN+ K++       S NP  +    TP   +L           +       +P GL
Sbjct: 1    MAWFRNLNKLSPSKPPLRSTNPHPFLPSTTPFTFLLSHFSSQPISDASASAEALSRPPGL 60

Query: 1666 EPTTRNEKPRVVVLGSGWAGCRLMKGLDTNIYDIVCVSPRNHMVFTPLLASTCVGTLEFR 1487
             PT   EKPRVVVLGSGWAGCRLMKGLDT+IYD+ CVSPRNHMVFTPLLASTCVGTLEFR
Sbjct: 61   GPTASGEKPRVVVLGSGWAGCRLMKGLDTSIYDVACVSPRNHMVFTPLLASTCVGTLEFR 120

Query: 1486 SVAEPIGRIQPAISKSPGSYFFLANCNAVDVQNHVISCETVTDEVETVRPWKFNIAYDKL 1307
            SVAEPIGRIQP+IS+ PGSYFFLANC +V+   H + CETVTD   T+ PW+F ++YDKL
Sbjct: 121  SVAEPIGRIQPSISREPGSYFFLANCTSVNTDEHSVQCETVTDGSNTLEPWRFKLSYDKL 180

Query: 1306 VIASGAEASTFGIKGVKEHATFLREVSHAQEIRRKLLLNLMLSEVPGLSEEEKIRLLHCV 1127
            +IA G++  TFGI GVKEHA FLREV HAQEIRRKLLLNLMLS+VPG+S EEK RLLHCV
Sbjct: 181  IIALGSQPLTFGIHGVKEHAIFLREVYHAQEIRRKLLLNLMLSDVPGISVEEKRRLLHCV 240

Query: 1126 VIGGGPTGVEFSGELSDFIMNDVRERYSHVKDYIQVTLIEANEILSSFDVRLRDYATNQL 947
            V+GGGPTGVEFSGELSDFI+ DV +RYSHVKDYIQVTLIEANEILSSFD RLR YAT QL
Sbjct: 241  VVGGGPTGVEFSGELSDFIIKDVTQRYSHVKDYIQVTLIEANEILSSFDDRLRHYATKQL 300

Query: 946  TKSGVHLVHGVVKDVQSQKIILSDDTEVPYGLLVWSTGVGPSPFTKSMEFPKSPGGRIGV 767
            TKSGV LV G+VKDV+ Q IIL+D +EVPYGLLVWSTGVGPSPF  S+E PKSPGGRIG+
Sbjct: 301  TKSGVQLVRGIVKDVKPQSIILNDGSEVPYGLLVWSTGVGPSPFVNSLEVPKSPGGRIGI 360

Query: 766  DDWLRVPSVQDVFAVGDCAGFLETTGKPVLPALAQVAERQGKYLAAMLNQIGKEGGGHAN 587
            D+WLRVP+V+DVFA+GDC+GFLE+TGK VLPALAQVAERQGKYLAA+LN+IGKEGGG A 
Sbjct: 361  DEWLRVPAVEDVFAIGDCSGFLESTGKQVLPALAQVAERQGKYLAALLNKIGKEGGGRAG 420

Query: 586  CVGDKDLGAPFVYKHLGSMATVGRYKALVDLRKSKEAKGLSLTGFVSWFIWRSAYLTRVV 407
               + +LG PFVYKHLGSMAT+GRYKALVDLR+SKEAKG+S+ GF+SWF+WRSAYLTRV+
Sbjct: 421  SGKNLELGDPFVYKHLGSMATIGRYKALVDLRQSKEAKGISMAGFLSWFVWRSAYLTRVI 480

Query: 406  SWRNRFYVAVNWLTTFVFGRDISRI 332
            SWRNRFYVAVNW TTF+FGRDISRI
Sbjct: 481  SWRNRFYVAVNWATTFIFGRDISRI 505


>ref|XP_002313376.1| predicted protein [Populus trichocarpa] gi|222849784|gb|EEE87331.1|
            predicted protein [Populus trichocarpa]
          Length = 452

 Score =  756 bits (1952), Expect = 0.0
 Identities = 363/448 (81%), Positives = 406/448 (90%)
 Frame = -3

Query: 1675 SGLEPTTRNEKPRVVVLGSGWAGCRLMKGLDTNIYDIVCVSPRNHMVFTPLLASTCVGTL 1496
            +GLEPT  +EKPRVVVLGSGWAGCRLMKG+DT++YD+VCVSPRNHMVFTPLLASTCVGTL
Sbjct: 5    AGLEPTKGDEKPRVVVLGSGWAGCRLMKGIDTDLYDVVCVSPRNHMVFTPLLASTCVGTL 64

Query: 1495 EFRSVAEPIGRIQPAISKSPGSYFFLANCNAVDVQNHVISCETVTDEVETVRPWKFNIAY 1316
            EFRSVAEPIGRIQPAISK+PGSYFFLANC ++D + H++ CETVTD ++TV PW+F I+Y
Sbjct: 65   EFRSVAEPIGRIQPAISKAPGSYFFLANCTSLDTEKHMVHCETVTDGLDTVDPWRFKISY 124

Query: 1315 DKLVIASGAEASTFGIKGVKEHATFLREVSHAQEIRRKLLLNLMLSEVPGLSEEEKIRLL 1136
            DKL+IA GAEA TFGI GVKEHA FLREV HAQEIRRKLLLNLMLS++PGLSEEEK RLL
Sbjct: 125  DKLIIALGAEALTFGIHGVKEHAIFLREVRHAQEIRRKLLLNLMLSDMPGLSEEEKSRLL 184

Query: 1135 HCVVIGGGPTGVEFSGELSDFIMNDVRERYSHVKDYIQVTLIEANEILSSFDVRLRDYAT 956
            HCVV+GGGPTGVEFSGELSDFI+ DVR+ YSHVKDYI VTLIEANEILSSFD  LR YAT
Sbjct: 185  HCVVVGGGPTGVEFSGELSDFILKDVRQTYSHVKDYIHVTLIEANEILSSFDDSLRRYAT 244

Query: 955  NQLTKSGVHLVHGVVKDVQSQKIILSDDTEVPYGLLVWSTGVGPSPFTKSMEFPKSPGGR 776
             QLTKSGVHLV G+VKDV+ QK+IL+D TEVPYGLLVWSTGVGPS F KS+E  KSPGGR
Sbjct: 245  KQLTKSGVHLVRGIVKDVKPQKLILTDGTEVPYGLLVWSTGVGPSSFVKSLELSKSPGGR 304

Query: 775  IGVDDWLRVPSVQDVFAVGDCAGFLETTGKPVLPALAQVAERQGKYLAAMLNQIGKEGGG 596
            IG+D+WLRVPSV DVFA+GDC+GFLE+TGKPVLPALAQVAERQGKYLA +LN+IGK+GGG
Sbjct: 305  IGIDEWLRVPSVPDVFAIGDCSGFLESTGKPVLPALAQVAERQGKYLAKLLNKIGKDGGG 364

Query: 595  HANCVGDKDLGAPFVYKHLGSMATVGRYKALVDLRKSKEAKGLSLTGFVSWFIWRSAYLT 416
                  + +LG PFVY+HLGSMAT+GRYKALVDLR+SKEAKGL+L GF SWFIWRSAYLT
Sbjct: 365  RRTSGEEVELGDPFVYRHLGSMATIGRYKALVDLRQSKEAKGLALKGFASWFIWRSAYLT 424

Query: 415  RVVSWRNRFYVAVNWLTTFVFGRDISRI 332
            RV+SWRNRFYVA+NW TTFVFGRDISRI
Sbjct: 425  RVISWRNRFYVAINWATTFVFGRDISRI 452


>emb|CAB52796.1| putative internal rotenone-insensitive NADH dehydrogenase [Solanum
            tuberosum]
          Length = 495

 Score =  749 bits (1934), Expect = 0.0
 Identities = 366/498 (73%), Positives = 421/498 (84%)
 Frame = -3

Query: 1825 MTWFRNILKVTSLNPSLYSKPKTPSPQILXXXXXXXXXXXNEQQTITKKPSGLEPTTRNE 1646
            M WF+N++K++    +  S  K+ +P  L            +Q +      GLE T  ++
Sbjct: 1    MPWFKNLIKISKTITNQSSSYKSITP--LASPLLTQFLQFTKQYSTNDHVVGLEATKSDQ 58

Query: 1645 KPRVVVLGSGWAGCRLMKGLDTNIYDIVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIG 1466
            KPR+VVLGSGWAGCRLMK +DTNIYD+VCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIG
Sbjct: 59   KPRIVVLGSGWAGCRLMKDIDTNIYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIG 118

Query: 1465 RIQPAISKSPGSYFFLANCNAVDVQNHVISCETVTDEVETVRPWKFNIAYDKLVIASGAE 1286
            RIQPA+S  P SYFFLANCNA+D  NH+I CETVT+ VET+  WKFN++YDKLVIASGA 
Sbjct: 119  RIQPAVSTQPASYFFLANCNAIDFDNHMIECETVTEGVETLEAWKFNVSYDKLVIASGAH 178

Query: 1285 ASTFGIKGVKEHATFLREVSHAQEIRRKLLLNLMLSEVPGLSEEEKIRLLHCVVIGGGPT 1106
            A TFGIKGV EHATFLREV HAQEIRRKLLLNLMLS+VPG+SEEEK RLLHCVV+GGGPT
Sbjct: 179  ALTFGIKGVNEHATFLREVHHAQEIRRKLLLNLMLSDVPGVSEEEKRRLLHCVVVGGGPT 238

Query: 1105 GVEFSGELSDFIMNDVRERYSHVKDYIQVTLIEANEILSSFDVRLRDYATNQLTKSGVHL 926
            GVEFSGELSDFI+ DV +RY+HVKDYI VTLIEANEILSSFD RLR YATNQLTKSGV L
Sbjct: 239  GVEFSGELSDFILKDVHQRYAHVKDYIHVTLIEANEILSSFDDRLRVYATNQLTKSGVRL 298

Query: 925  VHGVVKDVQSQKIILSDDTEVPYGLLVWSTGVGPSPFTKSMEFPKSPGGRIGVDDWLRVP 746
            V G+V+ VQ   IILSD T VPYGLLVWSTGVGPSPF  S++ PK+  GRIG+D+WLRVP
Sbjct: 299  VRGLVQHVQPDNIILSDGTNVPYGLLVWSTGVGPSPFVNSLDIPKAK-GRIGIDEWLRVP 357

Query: 745  SVQDVFAVGDCAGFLETTGKPVLPALAQVAERQGKYLAAMLNQIGKEGGGHANCVGDKDL 566
            SVQDV+++GDC+GFLE+TG+ VLPALAQVAERQGKYLA++LN++GK+GGGHANC  + +L
Sbjct: 358  SVQDVYSIGDCSGFLESTGRQVLPALAQVAERQGKYLASLLNKVGKQGGGHANCAQNINL 417

Query: 565  GAPFVYKHLGSMATVGRYKALVDLRKSKEAKGLSLTGFVSWFIWRSAYLTRVVSWRNRFY 386
            G PFVYKHLGSMAT+GRYKALVDLR+SKEAKG+SL GF S+F+WRSAYLTRVVSWRN+ Y
Sbjct: 418  GDPFVYKHLGSMATIGRYKALVDLRESKEAKGVSLAGFTSFFVWRSAYLTRVVSWRNKIY 477

Query: 385  VAVNWLTTFVFGRDISRI 332
            V +NWLTT VFGRDISRI
Sbjct: 478  VLINWLTTLVFGRDISRI 495


>ref|XP_003551266.1| PREDICTED: probable NADH dehydrogenase-like [Glycine max]
          Length = 506

 Score =  748 bits (1930), Expect = 0.0
 Identities = 367/507 (72%), Positives = 420/507 (82%), Gaps = 9/507 (1%)
 Frame = -3

Query: 1825 MTWFRNILKVTSLNPSLYSKPKTPSPQILXXXXXXXXXXXNEQQTITKKP---------S 1673
            M W RN+ K  +   S   +PK   P  L               TI +KP         S
Sbjct: 1    MAWLRNLSKFATKRASSSQRPKNTDPFCLLPSFTFLSHFS-STNTIEEKPCVEPVEYNYS 59

Query: 1672 GLEPTTRNEKPRVVVLGSGWAGCRLMKGLDTNIYDIVCVSPRNHMVFTPLLASTCVGTLE 1493
            GLEPT  +EKPRVVVLGSGWAGCRLMKGLD  +YDIVCVSPRNHMVFTPLLASTCVGTLE
Sbjct: 60   GLEPTRPHEKPRVVVLGSGWAGCRLMKGLDPRVYDIVCVSPRNHMVFTPLLASTCVGTLE 119

Query: 1492 FRSVAEPIGRIQPAISKSPGSYFFLANCNAVDVQNHVISCETVTDEVETVRPWKFNIAYD 1313
            FRSVAEPIGRIQPAIS+ PGSYFFLANC  +D  NH++ CETVT+ VET+ PWKF I+YD
Sbjct: 120  FRSVAEPIGRIQPAISREPGSYFFLANCTQIDAHNHMVHCETVTEGVETIAPWKFTISYD 179

Query: 1312 KLVIASGAEASTFGIKGVKEHATFLREVSHAQEIRRKLLLNLMLSEVPGLSEEEKIRLLH 1133
            KLVIA G++ STFGI+GVKEHA FLREV HAQEIRRKLLLNLMLS+VPG+SEEEK RLLH
Sbjct: 180  KLVIALGSQPSTFGIQGVKEHAIFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKQRLLH 239

Query: 1132 CVVIGGGPTGVEFSGELSDFIMNDVRERYSHVKDYIQVTLIEANEILSSFDVRLRDYATN 953
            CVV+GGGPTGVEFSGELSDFI  DVR+RY HVKDYI+VTLIEANEILSSFD RLR YAT 
Sbjct: 240  CVVVGGGPTGVEFSGELSDFITRDVRQRYVHVKDYIRVTLIEANEILSSFDDRLRRYATK 299

Query: 952  QLTKSGVHLVHGVVKDVQSQKIILSDDTEVPYGLLVWSTGVGPSPFTKSMEFPKSPGGRI 773
            QLTKSGV LV G+VKDV+ QKI+L+D +EVPYGLLVWSTGVGP P  +S++ PK+PGGRI
Sbjct: 300  QLTKSGVRLVRGIVKDVKPQKIVLNDGSEVPYGLLVWSTGVGPLPIIQSLDLPKAPGGRI 359

Query: 772  GVDDWLRVPSVQDVFAVGDCAGFLETTGKPVLPALAQVAERQGKYLAAMLNQIGKEGGGH 593
            GVD+WLRV SVQDVF++GDC+GF+E+TG+  LPALAQVAERQGKYLAA+LN+IGK G GH
Sbjct: 360  GVDEWLRVSSVQDVFSIGDCSGFVESTGRQTLPALAQVAERQGKYLAALLNKIGKAGAGH 419

Query: 592  ANCVGDKDLGAPFVYKHLGSMATVGRYKALVDLRKSKEAKGLSLTGFVSWFIWRSAYLTR 413
            AN   + + G PFVY+HLGSMA++GRYKALVDLR++KEAKGL+L GF+S+FIWRSAY+TR
Sbjct: 420  ANSAKEIEFGDPFVYRHLGSMASIGRYKALVDLRQNKEAKGLALAGFLSFFIWRSAYITR 479

Query: 412  VVSWRNRFYVAVNWLTTFVFGRDISRI 332
            V+SWRNRFYV VNW+TT VFGRDISR+
Sbjct: 480  VISWRNRFYVFVNWITTVVFGRDISRL 506


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