BLASTX nr result
ID: Coptis21_contig00005381
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00005381
(1208 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g... 117 6e-24
dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare] 114 4e-23
gb|ACM17601.1| F-box family-6 [Oryza sativa Indica Group] 110 7e-22
gb|EAY77591.1| hypothetical protein OsI_32630 [Oryza sativa Indi... 110 7e-22
ref|NP_001067476.1| Os11g0209100 [Oryza sativa Japonica Group] g... 109 2e-21
>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
gi|222873903|gb|EEF11034.1| f-box family protein [Populus
trichocarpa]
Length = 453
Score = 117 bits (293), Expect = 6e-24
Identities = 105/338 (31%), Positives = 151/338 (44%), Gaps = 41/338 (12%)
Frame = -2
Query: 1030 EDRICCLHEPLLHHILSFMDMKEVVQTSLLSKRWRNVWRSVSVLNFDEVEWSK------- 872
EDRI L LLHHILSF+D +VVQT +LSKRW NVW+S L+F+ +S
Sbjct: 34 EDRISTLPNVLLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSDYY 93
Query: 871 PRCKSKFMFFVDTVLLLRDGSDIHKFELFFATAHSGDSVRIERWIAYAIKRSVQVLDIAG 692
+ F F+ VL+ R +++ F+L T +E I YA+K V+ + I
Sbjct: 94 DDDMNNFTDFIYHVLVRR--NNVKAFKLSLDTRRDCQYSVVESLIYYAVKHHVEEISINT 151
Query: 691 VSIASPNLI--CLFGCVNTLDL-----GAIVLP--------------GDEN--GNLILDL 581
P ++ C F C + L G + LP G +N G +
Sbjct: 152 AHWDVPIVLPRCFFDCESLRSLKLKVDGGLALPKSLGLQSLKTLHLGGAQNFDGKIFSSC 211
Query: 580 PILENLIIQSCDHCELISLTISGPKLKYLQLYN-TFPEINYGTSIKKSAPNLTSLKCKGY 404
P LENL I+ + + I LK L++ N + I G + AP LTS K G
Sbjct: 212 PNLENLTIEDICLNVIENFNIHALSLKSLEILNWRYNRIKQGCKVMLVAPKLTSFKFDGN 271
Query: 403 TYQDYTLENLSALVTAEIDAK----------INCKDEDADEVTTLNTLFGRCLSSILKGL 254
T ++ NL++L + + +DE E G L +L
Sbjct: 272 TPLFWSDVNLTSLDDVNVVLQRYHHSHNYPFYVVEDEYISEEDETEQGLGLNLIKMLHQF 331
Query: 253 TNAKSLTLSAHDFQVFEELPKLLDGVPNSYQNLKYLKL 140
+AKSLTLS + ++ E+P LD P+ + NLKYLKL
Sbjct: 332 CSAKSLTLSMNIIEILSEVPAALDKHPSPFSNLKYLKL 369
>dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 114 bits (286), Expect = 4e-23
Identities = 104/327 (31%), Positives = 158/327 (48%), Gaps = 3/327 (0%)
Frame = -2
Query: 1027 DRICCLHEPLLHHILSFMDMKEVVQTSLLSKRWRNVWRSVSVLNFDEVEWSKPRCKSKFM 848
DR+ L + LLHH++SF+ M EVV+TSLLS RWR VWRS + D E+ KSK
Sbjct: 22 DRLSSLPDDLLHHVMSFLPMPEVVRTSLLSPRWRFVWRSTPFIRIDGAEFMD---KSKLE 78
Query: 847 FFVDTVLLLRD-GSDIHKFELFFATAHSGDSVRIERWIAYAIKRSVQVLDIAGVSIASPN 671
FVD +LLL D + + K + + H D + WI +AI V+VL I+G
Sbjct: 79 NFVDCLLLLHDYTASLDKARI---SLHCIDHTKCSVWIRHAIMHKVRVLHISGPLSLDKT 135
Query: 670 LICLFGCVNTLDLGAIVLPGDENGNLILDLPILENLIIQSCDHCELISLTISGPKLKYLQ 491
I + T+ L + +L L D P+LE+L ++ C+ C+ + IS LK L
Sbjct: 136 AIFPSQHLKTIRLQSAILRHGLFRPLNYDCPVLEHLELELCNFCD--NEEISSTSLKVLH 193
Query: 490 LYNTFPEINYGTSIKKSAPNLTSLKCKGYTYQDYTLENLSALVTAEIDAKINCKDEDADE 311
+ + TS+ A NLT L D ++LS+LVTA I + I+C D+D
Sbjct: 194 ISQCY----LTTSLLICARNLTHLSILDPYIGDIVTKDLSSLVTASI-SLISCYDKDTVV 248
Query: 310 VTTLNTLFGRCLSSILKGLTNAKSLTLSAH-DFQVFE-ELPKLLDGVPNSYQNLKYLKLI 137
+ +L GL++A +L L A + + FE +LP + NL L +
Sbjct: 249 MD----------HHLLDGLSHATTLELHAPLNERAFESDLPTW-----PMFSNLTSLVVG 293
Query: 136 EWCDKSHIYSLAKLLEIFPHLETLVME 56
W + + L +L+ L+ L ++
Sbjct: 294 NWVMTADFHPLHGILQRSDKLKELTVK 320
>gb|ACM17601.1| F-box family-6 [Oryza sativa Indica Group]
Length = 440
Score = 110 bits (275), Expect = 7e-22
Identities = 103/364 (28%), Positives = 172/364 (47%), Gaps = 20/364 (5%)
Frame = -2
Query: 1033 EEDRICCLHEPLLHHILSFMDMKEVVQTSLLSKRWRNVWRSVSVLNFDEVEWSKPRCKSK 854
+EDR L + +LHHIL + ++ V+T +L++RWR++W+ + L + E +P K
Sbjct: 22 DEDRTGDLPDGILHHILGSLPARDAVRTCVLARRWRHLWKFATGLRITDREMREPAPMEK 81
Query: 853 FMFFVDTVLLLRDGSDIHKFELFFATAHS-GDSVRIERWIAYAIKRSVQVLD----IAGV 689
FVD +LLLR + + L S GD+ R+ W +A+ VQVL + G
Sbjct: 82 LQDFVDHLLLLRGRAPLETCWLNLTRLSSDGDARRVNLWFRHAVLCEVQVLRLDLILNGF 141
Query: 688 SIASPNLICLFGCVNTLDLGAIVLPGDENGNLILDLPILENLIIQSCDHCELISLTISGP 509
+ +L C+ L+L + L + P+LE+L I CD + +T
Sbjct: 142 QLKLDDLPLASRCLAKLNLSGVHLM--HSFPDFSCCPVLEHLDIFFCDLSDAKKITSQSM 199
Query: 508 KLKYLQLYNTFPEINYGTSIKKSAPNLTSLKCKGYTYQDYTLENLSALVTAEIDAKINCK 329
K ++ + TF +I + + SAPNL SL+ + Y ++ E + +V A + +++ +
Sbjct: 200 KCLNIR-HCTFSQI---SRTRISAPNLISLRLENYWHRTPVFEVMPLIVDAFV--RVHDR 253
Query: 328 DEDADEVTTLNTLFGRCLSS------------ILKGLTNAKSLTLSAH--DFQVFEELPK 191
D T+ N F CL I++ L+ AK+L LSAH +F EL +
Sbjct: 254 SGDWYSCTSGNADFEECLCEDCDFCHSNTNCVIMQALSQAKNLVLSAHEQEFIFKRELMR 313
Query: 190 LLDGVPNSYQNLKYLKLIE-WCDKSHIYSLAKLLEIFPHLETLVMERRKRLIEFELEEGD 14
++ NLK L LI +C ++ + +L P LE L++E FE+ E D
Sbjct: 314 C-----PTFSNLKTLLLINCFCVAFDLHGITSILRHTPVLEKLILE-----FFFEVTEHD 363
Query: 13 WDAE 2
+ E
Sbjct: 364 DEVE 367
>gb|EAY77591.1| hypothetical protein OsI_32630 [Oryza sativa Indica Group]
Length = 454
Score = 110 bits (275), Expect = 7e-22
Identities = 108/344 (31%), Positives = 166/344 (48%), Gaps = 19/344 (5%)
Frame = -2
Query: 1030 EDRICCLHEPLLHHILSFMDMKEVVQTSLLSKRWRNVWRSVS---------VLNF----D 890
EDR+ L E +LH ++SF+D ++ V+T +LS+RWR+VWR+V LN+ D
Sbjct: 61 EDRLSDLPEGVLHRVMSFLDSRQAVRTCVLSRRWRDVWRTVPRVHADFCDFTLNWTSDDD 120
Query: 889 EV-EWSKPRCKSKFMFFVDTVLLLRD-GSDIHKFELFFATAHSGD--SVRIERWIAYAIK 722
EV E + + F FV+ +L LRD + I F L F + GD S RWI+YA++
Sbjct: 121 EVDEAAVAEDEVVFNRFVNRLLELRDPNASIRSFFLRFCRSDGGDDGSAEGNRWISYALQ 180
Query: 721 RSVQVLDIAGVSIASPNLICLFGC--VNTLDLGAIVLPGDENGNLILDLPILENLIIQSC 548
++V+VL++A +S A +F + T+D +V+ L + P LE L +
Sbjct: 181 KNVRVLEVAVLSHALELDHSVFSSRYLRTMDFSNVVMNQGFFKQLEMGCPELEELFL--- 237
Query: 547 DHCELISLTISGPKLKYLQLYNTFPEINYGTSIKKSAPNLTSLKCKGYTYQDYTLENLSA 368
D C ++ IS LK L L T + TSI S+P++TSL L ++ A
Sbjct: 238 DECFIVDDEISSQTLKVLTLDATHFCCGFKTSI--SSPSITSLALHYPMSGKPVLNDMEA 295
Query: 367 LVTAEIDAKINCKDEDADEVTTLNTLFGRCLSSILKGLTNAKSLTLSAHDFQVFEELPKL 188
L++ + + C+ +D D L L L N ++L S H ++ E
Sbjct: 296 LMSTSM---LLCRVKDDD-------FAANDLRDYLWSLYNVENLDFSYHGKKLTME--NN 343
Query: 187 LDGVPNSYQNLKYLKLIEWCDKSHIYSLAKLLEIFPHLETLVME 56
L P + NL L L WC ++ Y L L+ P LE L +E
Sbjct: 344 LQLCP-KFINLVSLTLGPWCLDANFYGLIVFLQNSPILEKLTLE 386
>ref|NP_001067476.1| Os11g0209100 [Oryza sativa Japonica Group] gi|77549216|gb|ABA92013.1|
F-box domain containing protein, expressed [Oryza sativa
Japonica Group] gi|113644698|dbj|BAF27839.1| Os11g0209100
[Oryza sativa Japonica Group]
Length = 416
Score = 109 bits (272), Expect = 2e-21
Identities = 101/362 (27%), Positives = 171/362 (47%), Gaps = 18/362 (4%)
Frame = -2
Query: 1033 EEDRICCLHEPLLHHILSFMDMKEVVQTSLLSKRWRNVWRSVSVLNFDEVEWSKPRCKSK 854
+EDR L + +LHHIL + ++ +T +L++RWR++W+ + L + E +P K
Sbjct: 22 DEDRTGDLPDGILHHILGSLPARDAARTCVLARRWRHLWKFATGLRITDREMREPAPMEK 81
Query: 853 FMFFVDTVLLLRDGSDIHKFELFFATAHS-GDSVRIERWIAYAIKRSVQVLD----IAGV 689
FVD +LLLR + + L S GD+ R+ W +A+ VQVL + G
Sbjct: 82 LQDFVDHLLLLRGRAPLETCWLNLTRLSSDGDARRVNLWFRHAVLCEVQVLRLDLILNGF 141
Query: 688 SIASPNLICLFGCVNTLDLGAIVLPGDENGNLILDLPILENLIIQSCDHCELISLTISGP 509
+ +L C+ L+L + L + P+LE+L I CD + +T
Sbjct: 142 QLKLDDLPLASRCLAKLNLSGVHLM--HSFPDFSCCPVLEHLDIFFCDLSDAKKITSQSM 199
Query: 508 KLKYLQLYNTFPEINYGTSIKKSAPNLTSLKCKGYTYQDYTLENLSALVTAEIDAKINCK 329
K ++ + TF +I + + SAPNL SL+ + Y ++ E + +V A + +++ +
Sbjct: 200 KCLNIR-HCTFSQI---SRTRISAPNLISLRLENYWHRTPVFEVMPLIVDAFV--RVHDR 253
Query: 328 DEDADEVTTLNTLFGRCLSS------------ILKGLTNAKSLTLSAHDFQVFEELPKLL 185
D T+ N F CL I++ L+ AK+L LSAH+ + K L
Sbjct: 254 SGDWYSCTSGNADFEECLCEDCDFCHSNTNCVIMQALSQAKNLVLSAHEQEFI--FKKEL 311
Query: 184 DGVPNSYQNLKYLKLIE-WCDKSHIYSLAKLLEIFPHLETLVMERRKRLIEFELEEGDWD 8
P ++ NLK L LI +C ++ + +L P +E L++E FE+ E D +
Sbjct: 312 MRCP-TFSNLKTLLLINCFCVAFDLHGITSILRHTPVIEKLILE-----FFFEVTEHDDE 365
Query: 7 AE 2
E
Sbjct: 366 VE 367