BLASTX nr result

ID: Coptis21_contig00005367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005367
         (1025 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323992.1| predicted protein [Populus trichocarpa] gi|2...   320   3e-85
emb|CBI40064.3| unnamed protein product [Vitis vinifera]              309   8e-82
ref|XP_002270526.1| PREDICTED: 50S ribosomal protein L13-like [V...   309   8e-82
gb|ABK95352.1| unknown [Populus trichocarpa]                          306   4e-81
ref|XP_002300092.1| predicted protein [Populus trichocarpa] gi|2...   306   5e-81

>ref|XP_002323992.1| predicted protein [Populus trichocarpa] gi|222866994|gb|EEF04125.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  320 bits (821), Expect = 3e-85
 Identities = 158/205 (77%), Positives = 179/205 (87%)
 Frame = -1

Query: 989 MATKAAASTLNRNIKTALAGLRRINLEGLRWRVFDARGQVLGRLAAQISTVIQGKDKPTY 810
           MA++AAAS  N N+K ALAGL+RINLEGLRWRVFDA+GQVLGRLA+QISTVIQGKDKPTY
Sbjct: 1   MASQAAASAFNGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTY 60

Query: 809 TPHREEGDMCVVLNAKDICVTGRKLTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKA 630
            P+R++GD+CVVLNAKD+CVTGRK+TDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKA
Sbjct: 61  APYRDDGDICVVLNAKDVCVTGRKMTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKA 120

Query: 629 VLRMLPRNXXXXXXXXXXRIFVDNEHPFHDRPLEPYIMPPRSVRELRPRARRAMIRAQKK 450
           VLRMLPRN          RIF D+EHPF DRPLEPY+MPPR VRE+RPRARRAMIRAQKK
Sbjct: 121 VLRMLPRNKLRDDRDRKLRIFPDSEHPFGDRPLEPYVMPPRQVREMRPRARRAMIRAQKK 180

Query: 449 AENQQQKGDSGKIARRKREINNEIT 375
           AE QQ++G + K   +KRE+  E+T
Sbjct: 181 AE-QQEQGGNDKRKGKKREVEAELT 204


>emb|CBI40064.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score =  309 bits (791), Expect = 8e-82
 Identities = 153/200 (76%), Positives = 173/200 (86%)
 Frame = -1

Query: 974 AASTLNRNIKTALAGLRRINLEGLRWRVFDARGQVLGRLAAQISTVIQGKDKPTYTPHRE 795
           A S+ N N+K ALAGLRRINLEGLRWRVFDA+GQVLGRLA+QISTVIQGKDKPTYTP+RE
Sbjct: 2   ATSSFNGNMKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYTPNRE 61

Query: 794 EGDMCVVLNAKDICVTGRKLTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKAVLRML 615
           +GDMC+VLNAKDI VTGRKLT+KFYRWHTGYIGHLKERSLKDQ+AKDPTEVIRKAVLRML
Sbjct: 62  DGDMCIVLNAKDISVTGRKLTNKFYRWHTGYIGHLKERSLKDQLAKDPTEVIRKAVLRML 121

Query: 614 PRNXXXXXXXXXXRIFVDNEHPFHDRPLEPYIMPPRSVRELRPRARRAMIRAQKKAENQQ 435
           PRN          RIF  +EHPF+DRPLEPY+MPPR VRE+RPRARRA IRAQKKAE QQ
Sbjct: 122 PRNKLRDDRDRKLRIFAGDEHPFNDRPLEPYVMPPRQVREMRPRARRATIRAQKKAE-QQ 180

Query: 434 QKGDSGKIARRKREINNEIT 375
           Q+G +    +RK+E+  E++
Sbjct: 181 QQGTTDTRKKRKKEVEPEVS 200


>ref|XP_002270526.1| PREDICTED: 50S ribosomal protein L13-like [Vitis vinifera]
          Length = 216

 Score =  309 bits (791), Expect = 8e-82
 Identities = 153/200 (76%), Positives = 173/200 (86%)
 Frame = -1

Query: 974 AASTLNRNIKTALAGLRRINLEGLRWRVFDARGQVLGRLAAQISTVIQGKDKPTYTPHRE 795
           A S+ N N+K ALAGLRRINLEGLRWRVFDA+GQVLGRLA+QISTVIQGKDKPTYTP+RE
Sbjct: 2   ATSSFNGNMKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYTPNRE 61

Query: 794 EGDMCVVLNAKDICVTGRKLTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKAVLRML 615
           +GDMC+VLNAKDI VTGRKLT+KFYRWHTGYIGHLKERSLKDQ+AKDPTEVIRKAVLRML
Sbjct: 62  DGDMCIVLNAKDISVTGRKLTNKFYRWHTGYIGHLKERSLKDQLAKDPTEVIRKAVLRML 121

Query: 614 PRNXXXXXXXXXXRIFVDNEHPFHDRPLEPYIMPPRSVRELRPRARRAMIRAQKKAENQQ 435
           PRN          RIF  +EHPF+DRPLEPY+MPPR VRE+RPRARRA IRAQKKAE QQ
Sbjct: 122 PRNKLRDDRDRKLRIFAGDEHPFNDRPLEPYVMPPRQVREMRPRARRATIRAQKKAE-QQ 180

Query: 434 QKGDSGKIARRKREINNEIT 375
           Q+G +    +RK+E+  E++
Sbjct: 181 QQGTTDTRKKRKKEVEPEVS 200


>gb|ABK95352.1| unknown [Populus trichocarpa]
          Length = 205

 Score =  306 bits (785), Expect = 4e-81
 Identities = 151/205 (73%), Positives = 175/205 (85%)
 Frame = -1

Query: 989 MATKAAASTLNRNIKTALAGLRRINLEGLRWRVFDARGQVLGRLAAQISTVIQGKDKPTY 810
           MA++AAAS  N ++K A AGL+RINLEGLRWRVFDA+GQVLGRLA+QISTVIQGKDKPTY
Sbjct: 1   MASQAAASAFNSSMKKAHAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTY 60

Query: 809 TPHREEGDMCVVLNAKDICVTGRKLTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKA 630
            P+R++GDMCVVLNAKD+CVTGRK+TDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKA
Sbjct: 61  APYRDDGDMCVVLNAKDVCVTGRKMTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKA 120

Query: 629 VLRMLPRNXXXXXXXXXXRIFVDNEHPFHDRPLEPYIMPPRSVRELRPRARRAMIRAQKK 450
           VLRMLPRN          RIF D+EHPF D+P+E Y+MPPR VRE+RPRA+RAMIRAQKK
Sbjct: 121 VLRMLPRNKLRDDRDRKLRIFPDSEHPFGDQPVEAYVMPPRKVREMRPRAQRAMIRAQKK 180

Query: 449 AENQQQKGDSGKIARRKREINNEIT 375
           AE  +Q G+  K   +KRE+  ++T
Sbjct: 181 AEQLEQAGND-KRKGKKREVEADLT 204


>ref|XP_002300092.1| predicted protein [Populus trichocarpa] gi|222847350|gb|EEE84897.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  306 bits (784), Expect = 5e-81
 Identities = 151/205 (73%), Positives = 175/205 (85%)
 Frame = -1

Query: 989 MATKAAASTLNRNIKTALAGLRRINLEGLRWRVFDARGQVLGRLAAQISTVIQGKDKPTY 810
           MA++AAAS  N ++K A AGL+RINLEGLRWRVFDA+GQVLGRLA+QISTVIQGKDKPTY
Sbjct: 1   MASQAAASAFNGSMKKAHAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTY 60

Query: 809 TPHREEGDMCVVLNAKDICVTGRKLTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKA 630
            P+R++GDMCVVLNAKD+CVTGRK+TDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKA
Sbjct: 61  APYRDDGDMCVVLNAKDVCVTGRKMTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKA 120

Query: 629 VLRMLPRNXXXXXXXXXXRIFVDNEHPFHDRPLEPYIMPPRSVRELRPRARRAMIRAQKK 450
           VLRMLPRN          RIF D+EHPF D+P+E Y+MPPR VRE+RPRA+RAMIRAQKK
Sbjct: 121 VLRMLPRNKLRDDRDRKLRIFPDSEHPFGDQPVEAYVMPPRKVREMRPRAQRAMIRAQKK 180

Query: 449 AENQQQKGDSGKIARRKREINNEIT 375
           AE  +Q G+  K   +KRE+  ++T
Sbjct: 181 AEQLEQAGND-KRKGKKREVEADLT 204


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